January 2002 Commit Log

Number of Commits:
48
Number of Active Developers:
3
westram 2002-01-24 19:59 Rev.: 510

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16 lines of code changed in 2 files:

westram 2002-01-24 19:58 Rev.: 509

moved aw_assert from aw_device.hxx to aw_root.hxx

7 lines of code changed in 2 files:

westram 2002-01-24 19:57 Rev.: 508

* AW_status.cxx: - if button name starts with ^ it creates a new line
- new flag fixedSizeButtons for aw_message (defaults to true)

30 lines of code changed in 1 file:

westram 2002-01-24 19:56 Rev.: 507

for asking questions in a loop

164 lines of code changed in 2 files:

westram 2002-01-24 19:54 Rev.: 506

linked WINDOW/aw_question.hxx to INCLUDE directory

1 lines of code changed in 1 file:

westram 2002-01-24 19:53 Rev.: 505

removed Experiment menu (it's contained in Gene menu)

4 lines of code changed in 1 file:

westram 2002-01-24 19:52 Rev.: 504

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29 lines of code changed in 4 files:

westram 2002-01-24 19:50 Rev.: 503

* GEN_map.cxx: - uses GBT_add_data and GBT_write_sequence to create gene-species
- different help files for 'mark organisms' and 'mark gene-species'
- additional mark menu item 'mark all (gene-species/organisms), unmark rest'
- added mark_gene_species_using_current_alignment (plus menuitem)
- menu item to mark all organisms with marked genes
- extract genes to gene-species:
- checks if alignment already exists
- writes acc field
- tests if gene-species exists already

200 lines of code changed in 1 file:

westram 2002-01-24 19:49 Rev.: 502

actual -> current

1 lines of code changed in 1 file:

westram 2002-01-24 19:46 Rev.: 501

the error that was created during login to default-database is cleared afterwards

15 lines of code changed in 1 file:

westram 2002-01-24 19:45 Rev.: 500

outputs path if database entry is missing

38 lines of code changed in 1 file:

westram 2002-01-24 19:44 Rev.: 499

* adoptimize.c: - put some assertions into INDEX_DICT_OFFSET and ALPHA_DICT_OFFSET
- fixed a bug in debugging code (test_dictionary)

38 lines of code changed in 1 file:

westram 2002-01-24 19:42 Rev.: 498

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1 lines of code changed in 1 file:

westram 2002-01-24 19:42 Rev.: 497

skips unneeded lines when creating dependencies

4 lines of code changed in 1 file:

westram 2002-01-24 19:32 Rev.: 496

update help for marking gene-species and organisms

168 lines of code changed in 9 files:

westram 2002-01-22 19:33 Rev.: 495

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7 lines of code changed in 3 files:

westram 2002-01-22 19:33 Rev.: 494

Update of NTREE window for mark/unmark organism + gene-species

129 lines of code changed in 4 files:

westram 2002-01-22 19:32 Rev.: 493

added amino count to mod_fields_gc.sellst

16 lines of code changed in 3 files:

westram 2002-01-22 17:24 Rev.: 492

now comments are allowed in sellst's

7 lines of code changed in 1 file:

jobb 2002-01-22 14:29 Rev.: 491

protpars eingebaut

989 lines of code changed in 4 files:

westram 2002-01-18 20:41 Rev.: 490

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1 lines of code changed in 1 file:

westram 2002-01-18 20:27 Rev.: 489

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73 lines of code changed in 4 files:

westram 2002-01-18 20:24 Rev.: 488

added AWAR_GENE_CONTENT

1 lines of code changed in 1 file:

westram 2002-01-18 20:23 Rev.: 487

* NT_extern.cxx: - removed Experiment menu (contained in Gene menu)

1 lines of code changed in 1 file:

westram 2002-01-18 20:23 Rev.: 486

- when gene menu is created for ARB_NTREE, it contains
the Gene-Species, the Organism and the Experiment menu.

85 lines of code changed in 4 files:

westram 2002-01-18 20:21 Rev.: 485

* ED4_text_terminals.cxx: - deleted uninitialized pointer (if consensus was empty)

51 lines of code changed in 1 file:

westram 2002-01-18 20:21 Rev.: 484

* ED4_search.cxx: - during auto-jump from searchParamsChanged the cursor awars will not be
updated (there where problems caused with automatic selection of gene-species)
[nevertheless it does not really work - maybe because of auto-center?]

108 lines of code changed in 1 file:

westram 2002-01-18 20:20 Rev.: 483

* adtools.c: - GBT_read_gene_sequence can ignore 'complement'

6 lines of code changed in 1 file:

westram 2002-01-17 16:13 Rev.: 482

- uses GEN_is_genom_db

19 lines of code changed in 2 files:

westram 2002-01-17 15:55 Rev.: 481

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34 lines of code changed in 9 files:

westram 2002-01-17 15:54 Rev.: 480

new button for 'init from gene'

10 lines of code changed in 1 file:

westram 2002-01-17 15:53 Rev.: 479

- added a aw_input clone accepting a window title
- aw_string_selection sets width to length of 'prompt'

18 lines of code changed in 1 file:

westram 2002-01-17 15:52 Rev.: 478

* primer_design.cxx: - init positions and distance from species or gene
- primer lengths corrected on-the-fly
- config manager for primer design

357 lines of code changed in 1 file:

westram 2002-01-17 15:52 Rev.: 477

changed helpfile for IRS tree view

9 lines of code changed in 1 file:

westram 2002-01-17 15:51 Rev.: 476

create configuration uses selection box with existing configurations

1 lines of code changed in 1 file:

westram 2002-01-17 15:49 Rev.: 475

* GEN_interface.cxx: - if combined organism/gene awar changes -> search for pseudo-species or organism and select
* GEN_interface.cxx: - GEN_is_genom_db to test type of database

80 lines of code changed in 1 file:

westram 2002-01-17 15:48 Rev.: 474

* GEN_db.cxx: - added GEN_find_pseudo_species

18 lines of code changed in 1 file:

westram 2002-01-17 15:48 Rev.: 473

* AWTI_import.cxx: - uses GEN_is_genom_db

11 lines of code changed in 1 file:

westram 2002-01-17 15:48 Rev.: 472

minor changes for new s&q field selection

48 lines of code changed in 1 file:

westram 2002-01-17 15:47 Rev.: 471

drag with middle-mouse in select mode

1 lines of code changed in 1 file:

westram 2002-01-17 15:46 Rev.: 470

changed selection lists for s&q

6 lines of code changed in 1 file:

yadhu 2002-01-15 20:22 Rev.: 469

Secondary Editor Funktionert richtigcd SECEDIT/cd SECEDIT/!

15 lines of code changed in 1 file:

westram 2002-01-14 13:32 Rev.: 468

config for WWW window

41 lines of code changed in 2 files:

westram 2002-01-09 20:02 Rev.: 467

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12 lines of code changed in 2 files:

westram 2002-01-09 19:54 Rev.: 466

- implemented config manager (settings from awars can be saved/restored
to/from properties)
- added config-manager to NDS and Search&Query windows

611 lines of code changed in 16 files:

westram 2002-01-09 13:59 Rev.: 465

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34 lines of code changed in 1 file:

westram 2002-01-09 13:58 Rev.: 464

help files for all view modes in ARB_NT

92 lines of code changed in 4 files:

westram 2002-01-09 13:56 Rev.: 463

modifications for save configuration selection box

235 lines of code changed in 9 files:

December 2001 »

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