* fix click on species flags
- did not work when display was scrolled vertically
1 lines of code changed in 1 file:
* overload select_group with GBDATA element
- allow selection a group which will be moved (as dislocated group)
* replace {{{select_group(NULL)}}} by {{{deselect_group}}} to avoid now necessary casts
* select moved group in !BranchMover
24 lines of code changed in 2 files:
* reintegrates 'group' into 'trunk'
- implements #709
* adds: log:branches/group@15693:15702
293 lines of code changed in 13 files:
* reintegrates 'keys' into 'trunk'
- implements part of #687 (species traversal via keys)
- adds temp. unfolding of selected species
- several fixes to [15665] (PARSIMONY)
* adds: log:branches/keys@15591:15690
770 lines of code changed in 22 files:
* [15673] broke automatic refresh after resize and rezoom. fixed.
4 lines of code changed in 2 files:
* reintegrates 'fix' into 'trunk'
- fixes "jump to species" broken by [15665] (didn't work when tree folding changed)
- still broken for IRS tree (see #748)
* adds: log:branches/fix@15668:15672
41 lines of code changed in 6 files:
* reintegrates 'refactor' into 'trunk'
- refactored AWT_graphic
* now have explicit states with different permissions
1. update model + request view/DB updates (AWT_auto_refresh)
- always preceeded by DB->model up-to-date-check
- automatically updates the view on destruction
2. update (DB and view) from model
3. neither
- benefits
* saves several view-updates
* unproblematic nesting of functions requesting view-updates
* will allow
- delayed view-updates and
- easier modification of update logic
- fixes a bunch of update-issues (found on the way)
* adds: log:branches/refactor@15613:15615,15627:15637,15639:15664
634 lines of code changed in 33 files:
Allow skipping individual tool builds
Tools built and distributed with ARB can be skipped if their folder name
is found within ARB_BUILD_SKIP_PKGS.
4 lines of code changed in 1 file:
Add comments about pkg-config
7 lines of code changed in 1 file:
* adds a progress bar to 'multifurcate tree'
20 lines of code changed in 2 files:
* merge [15638] from 'refactor' into 'trunk'
- automatically adapt AWAR maximas (branch analysis)
66 lines of code changed in 4 files:
* reintegrates 'db' into 'trunk'
- drops support for database type {{{GB_LINK}}}
* adds: log:branches/db@15628:15639
52 lines of code changed in 19 files: