/trunk Developers: westram

Login name:
westram
Total Commits:
43,156 (87.2%)
Lines of Code:
1,198,867 (47.9%)
Most Recent Commit:
2022-09-10 15:22
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Activity in Directories

Directory Changes Lines of Code Lines per Change
Totals 43156 (100.0%) 1198867 (100.0%) 27.7
ARBDB/ 3959 (9.2%) 120380 (10.0%) 30.4
lib/nas/ 30 (0.1%) 66561 (5.6%) 2218.7
GDE/PHYLIP/ 146 (0.3%) 56082 (4.7%) 384.1
WINDOW/ 2650 (6.1%) 55908 (4.7%) 21.0
AWT/ 2223 (5.2%) 49051 (4.1%) 22.0
NTREE/ 2534 (5.9%) 48296 (4.0%) 19.0
UNIT_TESTER/run/display/ 204 (0.5%) 46531 (3.9%) 228.0
EDIT4/ 2451 (5.7%) 44286 (3.7%) 18.0
UNIT_TESTER/run/ 130 (0.3%) 30639 (2.6%) 235.6
HELP_SOURCE/oldhelp/ 2246 (5.2%) 30060 (2.5%) 13.3
CONVERTALN/ 463 (1.1%) 29090 (2.4%) 62.8
TOOLS/ 725 (1.7%) 23516 (2.0%) 32.4
GDE/PHYLIP/doc/ 42 (0.1%) 21478 (1.8%) 511.3
GENOM_IMPORT/ 389 (0.9%) 19995 (1.7%) 51.4
PARSIMONY/ 752 (1.7%) 19035 (1.6%) 25.3
PROBE/ 700 (1.6%) 18920 (1.6%) 27.0
DIST/ 750 (1.7%) 17531 (1.5%) 23.3
SOURCE_TOOLS/ 818 (1.9%) 15964 (1.3%) 19.5
/ 1084 (2.5%) 15424 (1.3%) 14.2
GDE/PHYML/ 32 (0.1%) 15189 (1.3%) 474.6
GENOM/ 885 (2.1%) 14226 (1.2%) 16.0
MERGE/ 730 (1.7%) 14032 (1.2%) 19.2
SECEDIT/ 590 (1.4%) 13502 (1.1%) 22.8
GDE/PHYML20130708/phyml/ 9 (0.0%) 13410 (1.1%) 1490.0
SL/FAST_ALIGNER/ 318 (0.7%) 12517 (1.0%) 39.3
lib/ 60 (0.1%) 12302 (1.0%) 205.0
ARB_GDE/ 593 (1.4%) 11757 (1.0%) 19.8
PROBE_DESIGN/ 497 (1.2%) 10927 (0.9%) 21.9
CORE/ 554 (1.3%) 10757 (0.9%) 19.4
SL/TREEDISP/ 513 (1.2%) 10459 (0.9%) 20.3
TEMPLATES/ 329 (0.8%) 9557 (0.8%) 29.0
NALIGNER/ 359 (0.8%) 9252 (0.8%) 25.7
UNIT_TESTER/ 534 (1.2%) 9202 (0.8%) 17.2
MULTI_PROBE/ 546 (1.3%) 9119 (0.8%) 16.7
ptpan/ 128 (0.3%) 8692 (0.7%) 67.9
lib/pictures/ 414 (1.0%) 8630 (0.7%) 20.8
PROBE_WEB/CLIENT/ 267 (0.6%) 8512 (0.7%) 31.8
AWTI/ 379 (0.9%) 7974 (0.7%) 21.0
GDE/FASTDNAML/ 37 (0.1%) 7391 (0.6%) 199.7
EISPACK/ 20 (0.0%) 7294 (0.6%) 364.7
AWTC/ 357 (0.8%) 7012 (0.6%) 19.6
PRIMER_DESIGN/ 291 (0.7%) 6913 (0.6%) 23.7
AISC/ 208 (0.5%) 6893 (0.6%) 33.1
GDE/RAxML/ 61 (0.1%) 6650 (0.6%) 109.0
GDE/AxML/ 17 (0.0%) 6003 (0.5%) 353.1
CONSENSUS_TREE/ 328 (0.8%) 5967 (0.5%) 18.1
lib/import/ 211 (0.5%) 5908 (0.5%) 28.0
HELP_SOURCE/ 234 (0.5%) 5720 (0.5%) 24.4
PHYLO/ 406 (0.9%) 4803 (0.4%) 11.8
ALIV3/ 174 (0.4%) 4669 (0.4%) 26.8
UNIT_TESTER/run/impexp/ 51 (0.1%) 4435 (0.4%) 86.9
PROBE_SERVER/PROBE_GROUP/ 91 (0.2%) 4351 (0.4%) 47.8
PROBE_SET/ 312 (0.7%) 4330 (0.4%) 13.8
AISC_COM/C/ 283 (0.7%) 4069 (0.3%) 14.3
STAT/ 278 (0.6%) 3879 (0.3%) 13.9
ISLAND_HOPPING/ 136 (0.3%) 3818 (0.3%) 28.0
lib/pixmaps/ 302 (0.7%) 3582 (0.3%) 11.8
AISC_MKPTPS/ 111 (0.3%) 3574 (0.3%) 32.1
AISC_COM/AISC/ 112 (0.3%) 3501 (0.3%) 31.2
RNA3D/ 308 (0.7%) 3486 (0.3%) 11.3
GDE/CLUSTALW/ 41 (0.1%) 3373 (0.3%) 82.2
SH/ 184 (0.4%) 3352 (0.3%) 18.2
GDEHELP/MENUS/ 260 (0.6%) 3303 (0.3%) 12.7
SL/DB_QUERY/ 176 (0.4%) 2999 (0.3%) 17.0
ARBDBPP/ 72 (0.2%) 2998 (0.3%) 41.6
lib/addlibs/ 13 (0.0%) 2859 (0.2%) 219.9
EDIT/ 91 (0.2%) 2810 (0.2%) 30.8
util/ 231 (0.5%) 2548 (0.2%) 11.0
SEQ_QUALITY/ 241 (0.6%) 2539 (0.2%) 10.5
GDE/MOLPHY/ 105 (0.2%) 2531 (0.2%) 24.1
PGT/ 178 (0.4%) 2495 (0.2%) 14.0
PERL2ARB/ 163 (0.4%) 2391 (0.2%) 14.6
lib/import/nonformats/ 19 (0.0%) 2340 (0.2%) 123.1
UNIT_TESTER/run/consense/3/ 11 (0.0%) 2336 (0.2%) 212.3
lib/pictures/edit4/ 45 (0.1%) 2300 (0.2%) 51.1
SL/AP_TREE/ 153 (0.4%) 2298 (0.2%) 15.0
RNACMA/ 83 (0.2%) 2284 (0.2%) 27.5
ALEIO/ 53 (0.1%) 2265 (0.2%) 42.7
PROBE_SERVER/PROBE_GROUP_DESIGN/ 46 (0.1%) 2253 (0.2%) 48.9
SL/DB_SCANNER/ 136 (0.3%) 2250 (0.2%) 16.5
SL/PRONUC/ 129 (0.3%) 2226 (0.2%) 17.2
GL/glAW/ 73 (0.2%) 2109 (0.2%) 28.8
SL/ALILINK/ 40 (0.1%) 2099 (0.2%) 52.4
NAMES/ 123 (0.3%) 2068 (0.2%) 16.8
READSEQ/ 36 (0.1%) 2004 (0.2%) 55.6
SL/TREE_READ/ 96 (0.2%) 1997 (0.2%) 20.8
SL/AW_NAME/ 180 (0.4%) 1994 (0.2%) 11.0
lib/pixmaps/unused/ 147 (0.3%) 1993 (0.2%) 13.5
PROBE_SERVER/ 85 (0.2%) 1809 (0.2%) 21.2
lib/pictures/consensus/ 13 (0.0%) 1667 (0.1%) 128.2
SL/SEQIO/ 80 (0.2%) 1638 (0.1%) 20.4
ORS_CGI/ 55 (0.1%) 1633 (0.1%) 29.6
SL/ITEMS/ 126 (0.3%) 1617 (0.1%) 12.8
SL/DB_UI/ 129 (0.3%) 1591 (0.1%) 12.3
SL/HELIX/ 103 (0.2%) 1562 (0.1%) 15.1
GL/glpng/ 37 (0.1%) 1553 (0.1%) 41.9
SERVERCNTRL/ 130 (0.3%) 1498 (0.1%) 11.5
UNIT_TESTER/run/consense/2/ 13 (0.0%) 1468 (0.1%) 112.9
PROBE_SERVER/WORKER/ 33 (0.1%) 1432 (0.1%) 43.3
SL/GUI_ALIVIEW/ 170 (0.4%) 1420 (0.1%) 8.3
SL/NDS/ 92 (0.2%) 1364 (0.1%) 14.8
lib/pictures/awt/ 75 (0.2%) 1360 (0.1%) 18.1
TEST/ 40 (0.1%) 1327 (0.1%) 33.1
ARBDB2/ 29 (0.1%) 1309 (0.1%) 45.1
SL/CB/ 47 (0.1%) 1289 (0.1%) 27.4
TRS/ 37 (0.1%) 1279 (0.1%) 34.5
GDEHELP/ 147 (0.3%) 1240 (0.1%) 8.4
lib/pictures/merge/ 48 (0.1%) 1214 (0.1%) 25.2
lib/pixmaps/pgt/ 43 (0.1%) 1199 (0.1%) 27.8
ARBDB_COMPRESS/ 30 (0.1%) 1197 (0.1%) 39.9
GDE/CORE/ 94 (0.2%) 1193 (0.1%) 12.6
SEER/ 41 (0.1%) 1115 (0.1%) 27.1
SL/TREE_WRITE/ 94 (0.2%) 1075 (0.1%) 11.4
XML/ 72 (0.2%) 1069 (0.1%) 14.8
PERL_SCRIPTS/SPECIES/ 28 (0.1%) 1020 (0.1%) 36.4
SL/SEQUENCE/ 141 (0.3%) 1003 (0.1%) 7.1
PROBE_COM/ 99 (0.2%) 913 (0.1%) 9.2
TREE_COMPRESS/ 9 (0.0%) 909 (0.1%) 101.0
ARBDBS/ 29 (0.1%) 850 (0.1%) 29.3
UNIT_TESTER/run/consense/1/ 17 (0.0%) 813 (0.1%) 47.8
PERL_SCRIPTS/ARBTOOLS/ 18 (0.0%) 801 (0.1%) 44.5
SL/GROUP_SEARCH/ 22 (0.1%) 785 (0.1%) 35.6
GDE/MOLPHY/doc/ 4 (0.0%) 758 (0.1%) 189.5
SL/LOCATION/ 29 (0.1%) 754 (0.1%) 26.0
TREEGEN/ 126 (0.3%) 706 (0.1%) 5.6
DBSERVER/ 71 (0.2%) 701 (0.1%) 9.8
SL/FILTER/ 70 (0.2%) 696 (0.1%) 9.9
lib/macros/.checks/ 3 (0.0%) 675 (0.1%) 225.0
SL/AW_HELIX/ 78 (0.2%) 663 (0.1%) 8.5
lib/pixmaps/icons/unused/ 32 (0.1%) 662 (0.1%) 20.6
lib/pixmaps/edit/ 72 (0.2%) 632 (0.1%) 8.7
UNIT_TESTER/run/help/ 11 (0.0%) 600 (0.1%) 54.5
UNIT_TESTER/run/pars/ 52 (0.1%) 597 (0.0%) 11.4
ORS_SERVER/ 33 (0.1%) 580 (0.0%) 17.5
GDEHELP/HELP_WRITTEN/ 27 (0.1%) 579 (0.0%) 21.4
PROBE_SERVER/TREE_MERGE/ 14 (0.0%) 572 (0.0%) 40.8
SOURCE_TOOLS/release/ 18 (0.0%) 557 (0.0%) 30.9
PERL_SCRIPTS/MAUS/ 11 (0.0%) 549 (0.0%) 49.9
GDE/MUSCLE/src/unused/ 3 (0.0%) 548 (0.0%) 182.6
PROBE_WEB/SERVER/ 43 (0.1%) 523 (0.0%) 12.1
UNIT_TESTER/run/xsub/ 5 (0.0%) 511 (0.0%) 102.2
UNIT_TESTER/run/tools/ 44 (0.1%) 499 (0.0%) 11.3
SL/FILE_BUFFER/ 43 (0.1%) 495 (0.0%) 11.5
GDE/SUPPORT/ 26 (0.1%) 494 (0.0%) 19.0
GDE/RAxML8/ 15 (0.0%) 491 (0.0%) 32.7
PERL_SCRIPTS/GENOME/ 16 (0.0%) 479 (0.0%) 29.9
SL/REGEXPR/ 52 (0.1%) 478 (0.0%) 9.1
lib/pixmaps/edit/unused/ 48 (0.1%) 469 (0.0%) 9.7
lib/pictures/unused/ 11 (0.0%) 462 (0.0%) 42.0
NAMES_COM/ 72 (0.2%) 460 (0.0%) 6.3
lib/submit/ 2 (0.0%) 446 (0.0%) 223.0
lib/inputMasks/ 25 (0.1%) 436 (0.0%) 17.4
GDE/HGL_SRC/ 27 (0.1%) 418 (0.0%) 15.4
HELP_SOURCE/source/ 29 (0.1%) 417 (0.0%) 14.3
SL/MACROS/ 74 (0.2%) 409 (0.0%) 5.5
SL/TREE_ADMIN/ 36 (0.1%) 401 (0.0%) 11.1
SL/ARB_TREE/ 86 (0.2%) 401 (0.0%) 4.6
SL/NEIGHBOURJOIN/ 68 (0.2%) 392 (0.0%) 5.7
GDEHELP/HELP_PLAIN/ 12 (0.0%) 372 (0.0%) 31.0
SL/MATRIX/ 59 (0.1%) 370 (0.0%) 6.2
lib/pictures/faligner/ 16 (0.0%) 369 (0.0%) 23.0
lib/pictures/query/ 18 (0.0%) 368 (0.0%) 20.4
bin/ 32 (0.1%) 361 (0.0%) 11.2
SL/ROOTED_TREE/ 17 (0.0%) 350 (0.0%) 20.5
lib/pictures/pars/ 7 (0.0%) 335 (0.0%) 47.8
SL/PTCLEAN/ 41 (0.1%) 330 (0.0%) 8.0
lib/pictures/awtc/ 19 (0.0%) 327 (0.0%) 17.2
TESTAWT/ 17 (0.0%) 317 (0.0%) 18.6
GDE/FASTTREE/ 10 (0.0%) 312 (0.0%) 31.2
lib/pixmaps/icons/ 17 (0.0%) 310 (0.0%) 18.2
TESTVECTORFONT/ 15 (0.0%) 307 (0.0%) 20.4
lib/macros/ 27 (0.1%) 302 (0.0%) 11.1
CAT/ 20 (0.0%) 300 (0.0%) 15.0
lib/pixmaps/merge/ 7 (0.0%) 295 (0.0%) 42.1
lib/pixmaps/print/ 20 (0.0%) 281 (0.0%) 14.0
HELP_SOURCE/genhelp/ 24 (0.1%) 272 (0.0%) 11.3
GDE/ 47 (0.1%) 271 (0.0%) 5.7
BUGEX/ 12 (0.0%) 251 (0.0%) 20.9
PERL_SCRIPTS/test/ 18 (0.0%) 239 (0.0%) 13.2
PERL_SCRIPTS/ARBTOOLS/IFTHELP/ 16 (0.0%) 237 (0.0%) 14.8
SL/CONSENSUS/ 17 (0.0%) 225 (0.0%) 13.2
SL/ 41 (0.1%) 225 (0.0%) 5.4
HEADERLIBS/ 12 (0.0%) 213 (0.0%) 17.7
SL/INSDEL/ 44 (0.1%) 212 (0.0%) 4.8
SL/REFENTRIES/ 45 (0.1%) 207 (0.0%) 4.6
GDE/MrBAYES/mrbayes_3.2.1/ 10 (0.0%) 203 (0.0%) 20.3
BINDEP/ 45 (0.1%) 187 (0.0%) 4.1
PERLTOOLS/ 47 (0.1%) 184 (0.0%) 3.9
GDE/CLUSTAL/ 24 (0.1%) 184 (0.0%) 7.6
AISC_COM/ 10 (0.0%) 183 (0.0%) 18.3
UNIT_TESTER/valgrind/ 5 (0.0%) 182 (0.0%) 36.4
SL/TRANSLATE/ 44 (0.1%) 182 (0.0%) 4.1
SL/ITEM_SHADER/ 43 (0.1%) 180 (0.0%) 4.1
WETC/ 57 (0.1%) 165 (0.0%) 2.8
PERL_SCRIPTS/SAI/ 5 (0.0%) 163 (0.0%) 32.6
CHIP/ 29 (0.1%) 160 (0.0%) 5.5
SOURCE_TOOLS/COMPILE_COMPAT/ 16 (0.0%) 157 (0.0%) 9.8
GDE/TREEPUZZLE/ 28 (0.1%) 154 (0.0%) 5.5
GDE/LOOPTOOL/ 26 (0.1%) 152 (0.0%) 5.8
lib/export/ 43 (0.1%) 145 (0.0%) 3.3
lib/pictures/cpro/ 6 (0.0%) 143 (0.0%) 23.8
lib/sellists/ 29 (0.1%) 142 (0.0%) 4.8
SL/XFERGUI/ 8 (0.0%) 142 (0.0%) 17.7
lib/pixmaps/print/unused/ 8 (0.0%) 138 (0.0%) 17.2
UNIT_TESTER/run/general/ 13 (0.0%) 136 (0.0%) 10.4
lib/macros/ARB/SEQ_DATA/ 4 (0.0%) 127 (0.0%) 31.7
PERL_SCRIPTS/BIOPERL/ 3 (0.0%) 123 (0.0%) 41.0
lib/pictures/phylo/ 9 (0.0%) 118 (0.0%) 13.1
GDE/TREEPUZZLE/src/ 14 (0.0%) 113 (0.0%) 8.0
lib/dtd/ 8 (0.0%) 111 (0.0%) 13.8
GL/ 15 (0.0%) 111 (0.0%) 7.4
AWDEMO/ 18 (0.0%) 107 (0.0%) 5.9
PERL_SCRIPTS/GENERAL/ 1 (0.0%) 99 (0.0%) 99.0
SL/FILTSEQEXP/ 18 (0.0%) 97 (0.0%) 5.3
ARBDB/EXAMPLES/ 19 (0.0%) 89 (0.0%) 4.6
PERL_SCRIPTS/lib/ 3 (0.0%) 81 (0.0%) 27.0
SOURCE_TOOLS/docs/ 1 (0.0%) 79 (0.0%) 79.0
PERL_SCRIPTS/ARBTOOLS/TESTS/ 2 (0.0%) 78 (0.0%) 39.0
SL/QUERY/ 16 (0.0%) 76 (0.0%) 4.7
GDE/PHYML20130708/ 11 (0.0%) 74 (0.0%) 6.7
lib/BUGS/ 5 (0.0%) 71 (0.0%) 14.2
ORS_COM/ 23 (0.1%) 66 (0.0%) 2.8
GDE/MAFFT/mafft-7.055-with-extensions/core/ 4 (0.0%) 65 (0.0%) 16.2
UNIT_TESTER/run/consense/4/ 6 (0.0%) 61 (0.0%) 10.1
SL/ALIVIEW/ 33 (0.1%) 58 (0.0%) 1.7
lib/motifHack/ 8 (0.0%) 56 (0.0%) 7.0
XML_IMPORT/IMP_TREE/ 36 (0.1%) 53 (0.0%) 1.4
XML_IMPORT/ 12 (0.0%) 47 (0.0%) 3.9
PROBE_WEB/ 4 (0.0%) 46 (0.0%) 11.5
lib/pictures/window/ 3 (0.0%) 45 (0.0%) 15.0
GDE/MAFFT/ 6 (0.0%) 43 (0.0%) 7.1
UNIT_TESTER/run/pvp/ 8 (0.0%) 41 (0.0%) 5.1
lib/arb_default/ 19 (0.0%) 40 (0.0%) 2.1
SL/XFERSET/ 12 (0.0%) 39 (0.0%) 3.2
etc/ 11 (0.0%) 38 (0.0%) 3.4
UNIT_TESTER/run/distance/ 11 (0.0%) 38 (0.0%) 3.4
GDE/MrBAYES/ 5 (0.0%) 37 (0.0%) 7.4
GDE/MUSCLE/ 6 (0.0%) 37 (0.0%) 6.1
BINDINGS/PERL/ 1 (0.0%) 37 (0.0%) 37.0
PERL_SCRIPTS/ARBTOOLS/DOCUMENTED/ 3 (0.0%) 33 (0.0%) 11.0
GDE/MAFFT/mafft-7.053-without-extensions/ 1 (0.0%) 33 (0.0%) 33.0
lib/gde/ 5 (0.0%) 32 (0.0%) 6.4
RNA3D/Attic/OPENGL/ 14 (0.0%) 32 (0.0%) 2.2
HELP_SOURCE/oldhelp/prompt/ 3 (0.0%) 32 (0.0%) 10.6
PERL_SCRIPTS/ACI/ 1 (0.0%) 30 (0.0%) 30.0
HELP_SOURCE/oldhelp/seer/ 15 (0.0%) 30 (0.0%) 2.0
SL/PVP/ 10 (0.0%) 28 (0.0%) 2.8
UNIT_TESTER/run/trees/ 1 (0.0%) 27 (0.0%) 27.0
UNIT_TESTER/run/consense/6/ 2 (0.0%) 26 (0.0%) 13.0
SL/SAICALC/ 13 (0.0%) 24 (0.0%) 1.8
GDE/SATIVA/ 12 (0.0%) 20 (0.0%) 1.6
PERL_SCRIPTS/IFTHELP/ 10 (0.0%) 18 (0.0%) 1.8
GDE/PROBCONS/ 4 (0.0%) 18 (0.0%) 4.5
doc/ 2 (0.0%) 11 (0.0%) 5.5
GDE/PROBCONS/probcons/ 4 (0.0%) 10 (0.0%) 2.5
GDE/TREEPUZZLE/doc/ 5 (0.0%) 9 (0.0%) 1.8
GDEHELP/DATA_FILES/ 2 (0.0%) 8 (0.0%) 4.0
BINDINGS/ 6 (0.0%) 8 (0.0%) 1.3
UNIT_TESTER/sockets/ 3 (0.0%) 7 (0.0%) 2.3
lib/pictures/unused/findcorr/ 27 (0.1%) 5 (0.0%) 0.1
fig2dev/dev/ 62 (0.1%) 4 (0.0%) 0.0
fig2dev/ 68 (0.2%) 4 (0.0%) 0.0
UNIT_TESTER/run/diff/ 8 (0.0%) 4 (0.0%) 0.5
GDE/PHYML20130708/phyml/src/ 2 (0.0%) 4 (0.0%) 2.0
GDE/MAFFT/mafft-7.055-with-extensions/extensions/mxscarna_src/ 2 (0.0%) 4 (0.0%) 2.0
GDE/SINA/builddir/src/ 2 (0.0%) 3 (0.0%) 1.5
GDE/MUSCLE/src/ 5 (0.0%) 3 (0.0%) 0.6
SOURCE_TOOLS/refactor/ 4 (0.0%) 2 (0.0%) 0.5
PERL_SCRIPTS/MACROS/ 4 (0.0%) 2 (0.0%) 0.5
GDE/MAFFT/mafft-7.055-with-extensions/extensions/ 2 (0.0%) 2 (0.0%) 1.0
GDE/MAFFT/mafft-7.055-with-extensions/ 3 (0.0%) 2 (0.0%) 0.6
lib/motifHack/pixmaps/ 3 (0.0%) 1 (0.0%) 0.3
UNIT_TESTER/run/homefake/.arb_prop/ 1 (0.0%) 1 (0.0%) 1.0
UNIT_TESTER/run/fakehome/ 2 (0.0%) 1 (0.0%) 0.5
UNIT_TESTER/flags/ 2 (0.0%) 1 (0.0%) 0.5
lib/rna3d/images/ 44 (0.1%) 0 (0.0%) 0.0
lib/rna3d/ 2 (0.0%) 0 (0.0%) 0.0
lib/pixmaps/seer/ 3 (0.0%) 0 (0.0%) 0.0
lib/pictures/unused/demo/ 27 (0.1%) 0 (0.0%) 0.0
lib/pictures/seer/ 5 (0.0%) 0 (0.0%) 0.0
lib/pictures/findcorr/ 20 (0.0%) 0 (0.0%) 0.0
lib/pictures/etc/ 1 (0.0%) 0 (0.0%) 0.0
lib/pictures/demo/ 27 (0.1%) 0 (0.0%) 0.0
lib/pictures/PARS/ 1 (0.0%) 0 (0.0%) 0.0
lib/icons/ 2 (0.0%) 0 (0.0%) 0.0
RNA3D/Attic/images/ 22 (0.1%) 0 (0.0%) 0.0
RNA3D/Attic/data/ 5 (0.0%) 0 (0.0%) 0.0
PGT/xslt/ 1 (0.0%) 0 (0.0%) 0.0
PERL_SCRIPTS/ 4 (0.0%) 0 (0.0%) 0.0
NIELS_F77/ 13 (0.0%) 0 (0.0%) 0.0
JAVALIB/ 1 (0.0%) 0 (0.0%) 0.0
GDEHELP/PHYLIP/ 42 (0.1%) 0 (0.0%) 0.0
GDE/TREEPUZZLE/data/ 5 (0.0%) 0 (0.0%) 0.0
GDE/SINA/ 2 (0.0%) 0 (0.0%) 0.0
GDE/SATIVA/sativa/epac/ 1 (0.0%) 0 (0.0%) 0.0
GDE/PHYML20130708/phyml/bin/ 2 (0.0%) 0 (0.0%) 0.0
GDE/MOLPHY/utl/ 42 (0.1%) 0 (0.0%) 0.0
DUMMYINC/ 1 (0.0%) 0 (0.0%) 0.0
BERGEY/ 1 (0.0%) 0 (0.0%) 0.0

Activity of westram

Most Recent Commits

westram 2022-09-10 15:22 Rev.: 19271


* fix #824
- limit display recursion depth (to approx. MAX_TREEDISP_RECURSION_DEPTH)
- when reached:
* truncate branch
* display warning in tree (like a leaf).
- applied to all 3 tree display modes (dendro, irs + radial)

63 lines of code changed in 3 files:

  • SL/TREEDISP: TreeDisplay.cxx (+37 -1), TreeDisplay.hxx (+5), irstree_display.cxx (+21 -6)
westram 2022-09-08 13:45 Rev.: 19270


* document default of sina binary (was changed with [19240]).
* add warning.

2 lines of code changed in 1 file:

  • HELP_SOURCE/source: sina_main.hlp (+2 -1)
westram 2022-09-08 13:12 Rev.: 19269


* timeout 'read' command after 3 days
- avoids script zombies when not started from console.

6 lines of code changed in 1 file:

  • SH: arb_launcher (+6 -2)
westram 2022-09-07 16:04 Rev.: 19268


* replace uses of {{{command -v}}}.

4 lines of code changed in 2 files:

  • SH: arb_launcher (+1 -1), arb_sina.sh (+3 -1)
westram 2022-09-07 16:03 Rev.: 19267


* replace uses of {{{realpath}}}.

4 lines of code changed in 1 file:

  • SH: arb_sina_install_from_fat_tarball.sh (+4 -2)
westram 2022-09-07 16:01 Rev.: 19266


* replace {{{realpath}}} locally in install script
- cannot use {{{arb_path.sh}}} here, because it's not yet installed.

42 lines of code changed in 1 file:

  • arb_install.sh (+42 -6)
westram 2022-09-07 15:57 Rev.: 19265


* script to replace {{{realpath}}} and {{{command -v}}}.

90 lines of code changed in 1 file:

  • SH: arb_path.sh (new 90)
westram 2022-09-05 16:09 Rev.: 19264


* configure 'buildinfo' for sina
- is shown with version number.
- currently uses r19248 (=last patch to sina code)
* whether configure is called depends on parent Makefile.

0 lines of code changed in 2 files:

  • GDE/SINA: Makefile (changed)
westram 2022-09-05 16:06 Rev.: 19263


* {{{arb_sina.sh}}}:
- no longer echo everything.
* instead show that fat tarball has been detected and show effective {{{LD_LIBRARY_PATH}}}.
- option to show general info (instead of running sina).
* full path.
* dynamic library dependencies.
* sina version.
* log that info into sys.info from {{{arb_launcher}}}

29 lines of code changed in 2 files:

  • SH: arb_launcher (+1), arb_sina.sh (+28 -3)
westram 2022-09-05 16:02 Rev.: 19262


* add 'View sysinfo' entry to arb 'Tools' menu.
- shows 'sys.info' generated by arb_launcher.
* document 'ARB session log archive'.

24 lines of code changed in 4 files:

  • HELP_SOURCE/source: console.hlp (new)
  • NTREE: NT_extern.cxx (+1)
  • SH: arb_show_log.pl (+13 -5)
westram 2022-09-05 16:00 Rev.: 19261


* tweak logged system information:
- log date.
- window manager
* dump basic info (XDG_CURRENT_DESKTOP + GDMSESSION)
- link to posting which collects common combinations
* dump version info of a few known window managers (where binary found).

32 lines of code changed in 1 file:

  • SH: arb_launcher (+32 -3)
westram 2022-09-03 19:23 Rev.: 19260


* cosmetic changes to text output.

5 lines of code changed in 1 file:

  • arb_install.sh (+5 -5)
westram 2022-09-03 19:22 Rev.: 19259


* backup {{{arb_tcp.dat}}} only when
- {{{arb_tcp.dat}}} exists and
- no backup was done today.

7 lines of code changed in 1 file:

  • arb_install.sh (+7 -3)
westram 2022-09-03 19:21 Rev.: 19258


* add "I don't want to edit anything" option

13 lines of code changed in 1 file:

  • arb_install.sh (+13 -8)
westram 2022-09-03 19:19 Rev.: 19257


* install sina together with arb, when a fat tarball is detected.

55 lines of code changed in 1 file:

  • arb_install.sh (+55)
westram 2022-09-03 19:17 Rev.: 19256


* use absolute name of entered installation path.
* detect arb- and sina-tarballs
- use absolute names of these tarballs
- eliminate weird {{{arb.tgz}}} symlinking.
* show arb-version url (in wiki) when no tarball found.

59 lines of code changed in 1 file:

  • arb_install.sh (+59 -36)
westram 2022-09-03 19:15 Rev.: 19255


* separator only inserts single empty line.
* insert single empty lines using separator.

17 lines of code changed in 1 file:

  • arb_install.sh (+17 -19)
westram 2022-09-03 19:13 Rev.: 19254


* print questions and important lines as {{{bold}}} and/or {{{underlined}}}.

30 lines of code changed in 1 file:

  • arb_install.sh (+30 -26)
westram 2022-09-03 19:10 Rev.: 19253


* indent case sections.

109 lines of code changed in 1 file:

  • arb_install.sh (+109 -103)
westram 2022-09-03 19:08 Rev.: 19252


* add section headers for readability.
* do not repeatedly print instructions when user enters wrong answer.

31 lines of code changed in 1 file:

  • arb_install.sh (+31 -13)

(8883 more)

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