May 2016 Commit Log

Number of Commits:
40
Number of Active Developers:
1
westram 2016-05-31 11:59 Rev.: 14894


* minor changes

12 lines of code changed in 1 file:

westram 2016-05-31 10:39 Rev.: 14892


* add an "all font" selection button (implements part of #672)
- allows to set font and/or size of all customizable fonts
- does not overwrite fixed-width-only GCs with a variable font

97 lines of code changed in 2 files:

westram 2016-05-31 09:00 Rev.: 14890


* add mechanism to delay GC-change-callbacks
* typedef GC container

42 lines of code changed in 2 files:

westram 2016-05-30 12:59 Rev.: 14888


* use user-defined color-group-names in colorize-GUI
* re-activate warning about needed restart (only warn once)

14 lines of code changed in 2 files:

westram 2016-05-30 09:50 Rev.: 14886


* minor motif-only changes

11 lines of code changed in 1 file:

westram 2016-05-30 09:12 Rev.: 14885


* add short font descriptions to motif version
- display them on font-selection-buttons
- runtime check vs duplicate names/specs (DEBUG)
* move font interface from aw_root.hxx -> aw_xfont.hxx (=restrict use to WINDOW library)

105 lines of code changed in 6 files:

westram 2016-05-29 09:17 Rev.: 14883


* do not allocate {{{AW_gc_manager::changed_cb}}} dynamically (instead use a null-cb during initialization)

5 lines of code changed in 1 file:

westram 2016-05-29 09:04 Rev.: 14882


* replace {{{is_color_group}}} by {{{type}}}-enum
* add some parameters to {{{gc_desc}}}-ctor

20 lines of code changed in 1 file:

westram 2016-05-29 08:50 Rev.: 14881


* define some magics

15 lines of code changed in 1 file:

westram 2016-05-29 07:56 Rev.: 14879


* remove {{{unused}}} from {{{gc_desc}}}
- simply do not add these unused GCs to the vector in {{{AW_gc_manager}}}
- changed syntax for reserved GCs: {{{!<num>}}} allows to reserve <num> GC numbers
* use new syntax in arb_pars

18 lines of code changed in 3 files:

westram 2016-05-28 12:54 Rev.: 14877


* {{{gc_desc}}}
- made copyable
- store {{{gc}}} (instead of calculating it from array index)
* (nearly) all function parameters are indices to GC-array now ({{{gc}}} only passed to {{{add_gc}}})

81 lines of code changed in 1 file:

westram 2016-05-28 10:41 Rev.: 14875


* remove ability to copy font information of GCs
- was not used
- did/would not work in gtk anyway

35 lines of code changed in 4 files:

westram 2016-05-28 10:28 Rev.: 14873


* no longer store awarnames in {{{gc_desc}}} (create them on-the-fly instead)
* bind font-changed-callback only to GCs which {{{has_font}}}
- on change: also update font-info for all following GCs with {{{has_font==false}}}
- at startup: update font-info after all GCs have been defined

55 lines of code changed in 1 file:

westram 2016-05-27 15:21 Rev.: 14871


* remove feature to add GCs w/o color (unused)
* use '!' instead of '--' to reserve GCs; renamed internal flag ('hidden'->'unused')

18 lines of code changed in 2 files:

westram 2016-05-27 12:33 Rev.: 14870


* arb_pars uses color-group-defaults of "arb_ntree"

1 lines of code changed in 1 file:

westram 2016-05-27 11:34 Rev.: 14868


* fix storage of drag_gc
- eliminate those stored in AWT_canvas and AW_window
- actively retrieve from AW_gc_manager when storing value into AWT_graphic (in AWT_canvas ctor)

15 lines of code changed in 7 files:

westram 2016-05-27 10:16 Rev.: 14866


* change names of GC-property-windows to reset stored window-user-sizes
- only done for "named" propery-windows (standard windows have already been reset with [14864])

4 lines of code changed in 4 files:

westram 2016-05-27 09:59 Rev.: 14864


* rewrote GC-management
- motivation: sync code with gtk version (as far as possible)
- motif now also uses a font selector button (opens a window with font and size selector)

490 lines of code changed in 2 files:

westram 2016-05-24 14:53 Rev.: 14862


* use separate GCs for bottom area (changed basename -> 'ARB_PHYLO_BOTTOM') => no longer uses canvas background color in gtk-version
* define lightgrey background for bottom area (workaround problem described in #433)
* change default colors (background, marker)

4 lines of code changed in 1 file:

westram 2016-05-24 13:07 Rev.: 14860


* DRY phylo display code

19 lines of code changed in 1 file:

westram 2016-05-24 13:00 Rev.: 14859


* fix wrong {{{base_drag}}}s passed to {{{AW_manage_GC}}} (see [14857])
* use meaningful names for GCs
* headline of bottom-section was not visible in motif-version. fixed.

27 lines of code changed in 3 files:

westram 2016-05-24 11:46 Rev.: 14857


* add assertion to {{{AW_manage_GC}}} checking if given {{{base_drag}}} is correct
- currently fails for arb_phylo (effect: changing background color overwrites 'NOT_MARKER' color)

5 lines of code changed in 1 file:

westram 2016-05-19 13:06 Rev.: 14852


* fix all broken mnemonics (missing, duplicates, wrong case)
* disable check in AWT_check_action_ids

16 lines of code changed in 7 files:

westram 2016-05-19 12:49 Rev.: 14850


* add tests using {{{index_of}}} on empty arrays
- crashed with SEGV
- fixed crash

5 lines of code changed in 1 file:

westram 2016-05-19 12:21 Rev.: 14849


* tweak mnemonic checker:
- if duplicate mnemonics are detected => show possibilities for all duplicates

30 lines of code changed in 1 file:

westram 2016-05-18 15:48 Rev.: 14848


* renamed GC used for IRS group boxes

23 lines of code changed in 3 files:

westram 2016-05-18 15:09 Rev.: 14846


* GC management (sync gtk+motif)
- motif-only code moved to bottom-of-file
- renamed some functions

430 lines of code changed in 1 file:

westram 2016-05-17 12:17 Rev.: 14843


* GC management (sync gtk+motif)
- use helper functions to create awar-names

71 lines of code changed in 2 files:

westram 2016-05-13 13:57 Rev.: 14841


* fixes #702 by lazy-loading sequence data

70 lines of code changed in 2 files:

westram 2016-05-12 10:34 Rev.: 14840


- log bugfix releases (manual merge from 'stable')

12 lines of code changed in 1 file:

westram 2016-05-12 08:58 Rev.: 14838


* no longer pseudo-hide gc-manager-object
- {{{aw_gc_manager}}} -> {{{AW_gc_manager}}}
- use pointers to {{{AW_gc_manager}}} instead of pointer-typedef

105 lines of code changed in 23 files:

westram 2016-05-07 09:07 Rev.: 14833


* reintegrates 'fixwarn' into 'trunk'
* adds: log:branches/fixwarn@14815:14832

386 lines of code changed in 35 files:

westram 2016-05-05 12:39 Rev.: 14813


* reintegrates 'fix' into 'trunk'
- workaround for incompatible vectorizer of gcc 6.1.0 (see #700)
* adds: log:branches/fix@14810:14812

18 lines of code changed in 1 file:

westram 2016-05-04 14:11 Rev.: 14809


* [14771] broke {{{GB_xcmd}}}: {{{LD_LIBRARY_PATH}}} was exported empty, causing dynamic link errors in external commands
- affected {{{arb_rnacma}}}, {{{SINA}}}?, {{{arb_primer}}}, ...

1 lines of code changed in 1 file:

westram 2016-05-04 13:25 Rev.: 14808


* allow .patch files in HEADERLIBS
* use INT_MAX instead of numeric_limits

3 lines of code changed in 2 files:

westram 2016-05-04 12:36 Rev.: 14807


* fix compilation with gcc 6.1.0
- fix shift-overflow in mafft
- fix return type in {{{eigen}}} (using patch)
- let Cxx14 compilers use all Cxx11 features

34 lines of code changed in 5 files:

westram 2016-05-02 17:23 Rev.: 14799


* make 4.1 spams the compile log with
{{{
recipe for target 'xxx' failed
}}}
* replaces {{{-oktofail}}} by {{{oktofail || true}}}

19 lines of code changed in 7 files:

westram 2016-05-02 15:47 Rev.: 14798


* fix Ubuntu 16.04 build
- add gcc 5.3.1
* fix isnan/isinf use (only in testcode)
- fix libdepends in install-scripts and -READMEs

28 lines of code changed in 5 files:

westram 2016-05-02 09:08 Rev.: 14792


* OSX build: workaround SIP restrictions

11 lines of code changed in 3 files:

westram 2016-05-02 08:55 Rev.: 14790


* accept any clang version

27 lines of code changed in 1 file:

April 2016 »

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