* changed color of close.xpm to blue (before it was identical to quit.xpm (=red))
* use close.xpm in NTREE-clone
* use quit.xpm in secedit
78 lines of code changed in 3 files:
* added target 'check_res' to help
2 lines of code changed in 1 file:
* fixed macro ids for merge species window
20 lines of code changed in 5 files:
* shortcut (=empty 1st search field) to 'search equal fields' in merge tool does no longer affect 'search for marked'
7 lines of code changed in 2 files:
- fix for [6117]
1 lines of code changed in 1 file:
- increased internal temp. buffer for species names from 8->30
3 lines of code changed in 1 file:
* test gcc-version before adding -gnu++0x
49 lines of code changed in 2 files:
* arb_save inserts 'arbsrc_REV' as directory prefix to source-tarball
* ignore all of names_*.dat
46 lines of code changed in 2 files:
* dont call lib/nas Makefile if lib/nas is a link
1 lines of code changed in 1 file:
* added c++0x compat switch (RALF only)
6 lines of code changed in 1 file:
* changed compile warning
1 lines of code changed in 1 file:
* cut off default value when scanning additional field from arb_tcp.dat (completes patch [6084])
6 lines of code changed in 1 file:
* Listed major changes for arb_5.00
42 lines of code changed in 1 file:
Auto version upgrade to 4.40 by devel@arb-home.de
2 lines of code changed in 1 file:
* reverts [6106]
2 lines of code changed in 2 files:
* EDIT4 jumped to wrong position when compressed view was active
- it was clipped at maximum screen-position (instead of maximum sequence-position)
4 lines of code changed in 1 file:
- fixed NDEBUG-compile errors (completes [6098] .. [6104])
5 lines of code changed in 2 files:
* ~~debugging messages for edit4 position~~
(reverted by [6109])
18 lines of code changed in 3 files:
* use window ID instead of window TITLE for entries in window-hash (fixes strange error messages when using filters e.g. in Raxml and then in Export)
2 lines of code changed in 1 file:
* use GB_warningf instead of GB_warning(GBS_global_string)
* same for GB_internal_error, GB_export_error
6 lines of code changed in 4 files:
* removed useless typedefs
* structs are public classes
21 lines of code changed in 3 files:
* fix warning "format not a string literal and no format arguments"
- GB_information -> GB_information/GB_informationf
25 lines of code changed in 6 files:
* fix warning "format not a string literal and no format arguments"
- GB_warning -> GB_warning/GB_warningf
69 lines of code changed in 17 files:
* fix warning "format not a string literal and no format arguments"
- GB_export_error -> GB_export_error/GB_export_errorf
243 lines of code changed in 62 files:
* fix warning "format not a string literal and no format arguments"
- GB_internal_error -> GB_internal_error/GB_internal_errorf
61 lines of code changed in 10 files:
* fix warning "format not a string literal and no format arguments"
- GBK_terminate -> GBK_terminate/GBK_terminatef
21 lines of code changed in 5 files:
* techno -> dev
2 lines of code changed in 2 files:
* Again allow display of hidden files in filter list (reverts part of [6082])
* renamed all rarely-used import filters into .importfilter
- user has to click on 'Show hidden files' to show these filters or to use them in AUTODETECT
* moved a few sub-filters to nonformats
* added .fasta_contextual_data_1_03.ift (thx to Renzo, Joerg and Frank Oliver)
* added fasta_wacc import/export filters (thx to Harald)
1529 lines of code changed in 60 files:
Auto version upgrade to 4.39 by devel@arb-home.de
2 lines of code changed in 1 file:
* missing header
* 64-bit fix
3 lines of code changed in 1 file:
* removed useless warning about missing error-reasons for global variables
2 lines of code changed in 1 file:
* import filters mostly SILVA compatible (thx to Frank Oliver)
* moved feature-table into separate filter which is included by longebi.ift and longgenbank.ift
* added AUTOTAGging (commented out)
431 lines of code changed in 6 files:
* new commands for import filters
- AUTOTAG (switch on/off automatic tagging)
- SETGLOBAL (global variables, set at beginning of each imported file)
* tweaked code of input_format_per_line and input_format_struct (memory handling)
* SetVariables changed type and access to set values
* user-errors are stored like variable values
* documentation of new commands
287 lines of code changed in 6 files: