September 2005 Commit Log

Number of Commits:

5

Number of Active Developers:

1

yadhu 2005-09-22 16:27 #5 Rev.: 3942

Files added to use in RNA3D program
1. 3D coordinate files (PDB) - E.coli
2. Secondary structure model files - 23S & 5S rRNA

3024 lines of code changed in 2 files:

• lib/rna3d: SecondaryStructureModel_23SrRNA.data (new 2904), SecondaryStructureModel_5SrRNA.data (new 120)

yadhu 2005-09-22 16:23 #4 Rev.: 3941

Changes to RNA3D module
1. Now, it can handle Large Subunit rRNA as well.

218 lines of code changed in 6 files:

• RNA3D: RNA3D_Interface.cxx (+14), RNA3D_OpenGLEngine.cxx (+12 -5), RNA3D_Renderer.cxx (+1 -1), RNA3D_StructureData.cxx (+163 -18), RNA3D_StructureData.hxx (+7 -1)
• lib/pictures: RNA3D_DisplayHelices.fig (+21 -23)

yadhu 2005-09-09 14:54 #3 Rev.: 3940

Changes to RNA3D program:
1. Added sychronization of colors with the primary EDITOR colors.
2. Renamed and added structure data files.

81 lines of code changed in 5 files:

• EDIT4: ED4_root.cxx (+33 -7)
• RNA3D: RNA3D_Interface.cxx (+25 -5), RNA3D_OpenGLEngine.cxx (+4), RNA3D_StructureData.cxx (+18 -9)
• lib/pictures: RNA3D_SeqMapping.fig (+1)

yadhu 2005-09-09 14:52 #2 Rev.: 3939

RNA3D: Structure data files for RNA3D program.

1552 lines of code changed in 4 files:

• RNA3D/Attic/data: SecondaryStructureModel_16SrRNA.data (new), TertiaryInteractions_16SrRNA.data (new)
• lib/rna3d: SecondaryStructureModel_16SrRNA.data (new 1529), TertiaryInteractions_16SrRNA.data (new 23)

yadhu 2005-09-09 14:51 #1 Rev.: 3938

RNA3D: Changed data file names !

0 lines of code changed in 2 files:

• lib/rna3d: ECOLI_SECONDARY_STRUCTURE_INFO (del), ECOLI_Tertiary_Interaction.data (del)

August 2005 »