February 2007 Commit Log

Number of Commits:
24
Number of Active Developers:
2
westram 2007-02-22 12:48 Rev.: 4330

- incremented nameserver db version to 3
- initiate dups-checker for db-versions below 3
- slightly changed print-out of dups-checker
- use hash to avoid repeated "name-exists"-tests to speed up
renaming DBs where many similar names occur (e.g. 'Uncultured bacteria')
- now creates up to 16.4 million different short names for species with
same (or similar) full name (limit was approx. 100000 before)

70 lines of code changed in 1 file:

westram 2007-02-22 12:48 Rev.: 4329

- doubled hash-size for dups/zombie detection

1 lines of code changed in 1 file:

westram 2007-02-21 13:33 Rev.: 4328

- hotkey fix

1 lines of code changed in 1 file:

westram 2007-02-21 13:30 Rev.: 4327

- call MG_export_fields for pseudo species only

14 lines of code changed in 1 file:

westram 2007-02-21 13:29 Rev.: 4326

- expect a pseudo species in MG_export_fields

5 lines of code changed in 1 file:

westram 2007-02-20 13:09 Rev.: 4325

- print error about all duplicate species + advice

12 lines of code changed in 1 file:

baderk 2007-02-16 17:19 Rev.: 4324

A lookup table is used during the consensus computation to speed up the iupac-code weighting.

252 lines of code changed in 2 files:

westram 2007-02-13 13:54 Rev.: 4323

- removed CHIP-interface (now directly integrated in CHIP-DESIGNER)

1 lines of code changed in 11 files:

baderk 2007-02-12 13:13 Rev.: 4322

Runtime optimization of the sequence quality function (work still in progress)

116 lines of code changed in 2 files:

westram 2007-02-08 16:01 Rev.: 4321

- skip .log

1 lines of code changed in 1 file:

baderk 2007-02-08 15:50 Rev.: 4320

Reformatted sourcecode (TABs removed)

292 lines of code changed in 2 files:

westram 2007-02-08 15:47 Rev.: 4319

- cleaned up some targets
- added target 'release_quick' (skips rebuild)

8 lines of code changed in 1 file:

baderk 2007-02-08 14:09 Rev.: 4318

gcc version 4.1.2 added

1 lines of code changed in 1 file:

westram 2007-02-08 13:03 Rev.: 4317

- updated

2 lines of code changed in 1 file:

westram 2007-02-08 13:03 Rev.: 4316

- 'transfer listed species' was completely broken:
. only tried to replace organisms (not all species)
. instead of deleting existing organism, it deleted ALL organisms
(no idea how that bug was able to exist undetected for 6 months)

10 lines of code changed in 1 file:

westram 2007-02-08 13:03 Rev.: 4315

- added species hash functions
- changed error message occurring during rename, when a real duplicate
species is in database

28 lines of code changed in 1 file:

westram 2007-02-08 13:01 Rev.: 4314

- GEN_is_organism denies to work with non-genome-db

4 lines of code changed in 1 file:

westram 2007-02-07 13:50 Rev.: 4313

- fixed call of nt_exit
- removed debug quick exit

5 lines of code changed in 1 file:

westram 2007-02-01 16:59 Rev.: 4312

- exclude '#*#'
- more comments
- precompiled expressions
- match tracing

123 lines of code changed in 1 file:

westram 2007-02-01 14:02 Rev.: 4311

- openGL
- 64bit note

14 lines of code changed in 1 file:

westram 2007-02-01 13:57 Rev.: 4310

- libGLEW version upgrade

7 lines of code changed in 4 files:

westram 2007-02-01 11:08 Rev.: 4309

- debug-only variable

9 lines of code changed in 1 file:

westram 2007-02-01 11:08 Rev.: 4308

- debug-only variable

5 lines of code changed in 1 file:

westram 2007-02-01 11:08 Rev.: 4307

- warning fix

5 lines of code changed in 1 file:

January 2007 »

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