* fix crash w/o tree
9 lines of code changed in 1 file:
* reintegrates 'fix' into 'trunk'
- fixes #522
* adds:
- log:branches/fix@12058:12137
1019 lines of code changed in 53 files:
* reintegrates 'tree' into 'trunk'
- fixes #527
* adds:
- log:branches/tree@12116:12120
151 lines of code changed in 8 files:
* do NOT call track_awar_change from inside change-callback of awar
- instead only remember that the awar has been changed and call track_awar_change later from VarUpdateInfo::change_from_widget
- fixes recording of awars stored in main-DB and changed in DB-client
19 lines of code changed in 1 file:
* chimera check
- renamed code, help, fig, macro id (to distinguish from 'sequence quality tool')
- try to document how it works
117 lines of code changed in 6 files:
* guard awar callbacks (asserting they do not export errors)
7 lines of code changed in 1 file:
* use typed CBs for user-mask elements
13 lines of code changed in 2 files:
* rename only
12 lines of code changed in 2 files:
* move identical virtual methods into base class
10 lines of code changed in 5 files:
* use typed callbacks in
- PROBE_DESIGN (complete)
- AWT (incomplete; several need deeper changes)
231 lines of code changed in 22 files:
* reintegrates 'gcc' into 'trunk'
* adds:
- log:branches/gcc@12076:12079
11 lines of code changed in 3 files:
- do not open weblinks
2 lines of code changed in 1 file:
* reintegrates 'fix' into 'trunk'
- fixes #521
* adds:
- log:branches/fix@12049:12053
47 lines of code changed in 3 files:
* reintegrates 'fix' into 'trunk' (fixes #519)
- this patch wasn't really straightforward, instead each change caused new unexpected side effects. It's quite likely that i didn't detect all of them.
* adds:
- log:branches/fix@12023,12027:12042
349 lines of code changed in 20 files:
* merge [12023:12026] from 'fix' into 'trunk'
- fixes to db-browser (debugz-menu)
* adds:
- log:branches/fix@12024:12026
32 lines of code changed in 5 files:
- when creating buttons showing awar-values
- insert at least " " into button label (otherwise motif shows buttons with only a few pixel height)
9 lines of code changed in 1 file:
* extend help for 'Sort tree by other tree'
16 lines of code changed in 1 file:
* reintegrates 'tree' into 'trunk'
- fixing #507
* adds:
- log:branches/tree@12004:12019
127 lines of code changed in 2 files:
* reintegrates 'fix' into 'trunk'
- slightly changes consensus tree generation
* adds:
- log:branches/fix@12008,12012:12013
189 lines of code changed in 13 files:
* merge [12008:12011] from 'fix' into 'trunk'
- fix broken double_cmp
* adds:
- log:branches/fix@12009:12011
10 lines of code changed in 5 files:
- add help for 'Mark duplicates' (fixes #513)
27 lines of code changed in 1 file:
* fixes #505
13 lines of code changed in 1 file:
* mix in some old-style lines
3 lines of code changed in 2 files:
* fix wrong test result
2 lines of code changed in 1 file:
* test-macro re-recorded
- manually created expected result
- mark test as "failing"
44 lines of code changed in 3 files:
* reintegrates 'fix' into 'trunk'
- cleanup etc.
* adds:
- log:branches/fix@11985,11990:11997
86 lines of code changed in 3 files:
* full update from child 'fix' into 'trunk'
- fixes #511
* adds:
- log:branches/fix@11986:11989
29 lines of code changed in 4 files:
* one toggle to DUMP_TAXONOMY_CACHING
21 lines of code changed in 1 file:
* fix "unused" warnings
7 lines of code changed in 2 files:
* don't create groups with empty name (fixes #510)
1 lines of code changed in 1 file:
* after modification from tree-display: if saving the tree returned an error, the tree failed to reload (name unknown by caller)
- if no name passed to AWT_graphic_tree::load, use last tree-name (or bail out)
- fixes #500
32 lines of code changed in 1 file:
- fix assertion
- tmp awar names can be "tmp/..." or "/tmp/.." :/
- fix NDEBUG warning
3 lines of code changed in 1 file:
- upgrade trunk version to 6.1
2 lines of code changed in 1 file:
- update changelog / release instructions
9 lines of code changed in 2 files:
* reintegrates 'customize' into 'trunk'
- implements #263
* adds:
- log:branches/customize@11950,11956:11967
178 lines of code changed in 41 files:
- fix macros for OSX (thx to Matt)
5 lines of code changed in 1 file:
* full update from child 'customize' into 'trunk'
* adds:
- log:branches/customize@11951:11955
270 lines of code changed in 4 files:
* reintegrates 'customize' into 'trunk'
- slightly refactored File_selection (to allow changes needed by #263)
* adds:
- log:branches/customize@11913:11919,11921:11942,11945:11947
226 lines of code changed in 18 files:
* merge misc changes from 'customize' into 'trunk'
* adds:
- log:branches/customize@11920,11943:11944
8 lines of code changed in 4 files:
- fix compile error (caused by [11934])
1 lines of code changed in 1 file:
* removed some deprecated parameters (belongs to [11932])
9 lines of code changed in 1 file:
* adapt some names to gtk-branch
44 lines of code changed in 2 files:
* mnemonic check
- no longer uses menu-depth ("unsolvable" off-by-one errors)
- injects help-menu when inserting help-menu-entries (fit to gtk)
- show window-name in warnings
114 lines of code changed in 2 files:
* add mnemonic check for help-menu-topics
* fix mnemonics in help-menus
14 lines of code changed in 5 files:
- adapt to gtk
46 lines of code changed in 1 file:
- changed 'server startup error' message (was to closely considering that a PTSERVER failed)
15 lines of code changed in 1 file: