July 2003 Commit Log

Number of Commits:
67
Number of Active Developers:
5
huberj 2003-07-31 18:43 Rev.: 1563

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13 lines of code changed in 1 file:

huberj 2003-07-31 18:34 Rev.: 1562

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16 lines of code changed in 4 files:

richter 2003-07-31 16:39 Rev.: 1561

multi node history in tree navigation enabled now

19 lines of code changed in 1 file:

richter 2003-07-31 16:25 Rev.: 1560

also missed before

25 lines of code changed in 1 file:

richter 2003-07-31 16:24 Rev.: 1559

lost at check in before

75 lines of code changed in 1 file:

richter 2003-07-31 16:23 Rev.: 1558

shorcuts for tree navigation add;
only one step back possible up to now

13 lines of code changed in 1 file:

richter 2003-07-31 15:45 Rev.: 1557

basic menu functions added, callbacks work now
no keybord shortcuts yet

100 lines of code changed in 5 files:

westram 2003-07-31 14:20 Rev.: 1556

new attribute 'folded'

3 lines of code changed in 1 file:

westram 2003-07-31 14:19 Rev.: 1555

XML-Tags of Species-XML-Export are case-sensitive now

1 lines of code changed in 1 file:

westram 2003-07-31 14:19 Rev.: 1554

added attribute 'folded' to XML-Tree-Export

9 lines of code changed in 1 file:

spanfeln 2003-07-29 10:54 Rev.: 1553

IDP: Modifying return names

8 lines of code changed in 1 file:

richter 2003-07-28 16:38 Rev.: 1552

missong file added

6 lines of code changed in 1 file:

richter 2003-07-28 15:37 Rev.: 1551

marking and unmarking of subtrees
reorganization of event handling code in separate class
left and right mouse button now distinguished

263 lines of code changed in 4 files:

richter 2003-07-25 13:39 Rev.: 1550

wrong root node reference in TreeParser.java fixed

2 lines of code changed in 1 file:

westram 2003-07-24 12:42 Rev.: 1549

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1 lines of code changed in 1 file:

richter 2003-07-23 13:39 Rev.: 1548

core classes for WEB-ARB / ALLPROBES for the local java client
contains: - TreeParser
- TreeLoader
- GUI frame
- TreeLayout and Display
- TreeNode definition
- supplementary helper and debug classes

514 lines of code changed in 9 files:

westram 2003-07-23 12:09 Rev.: 1547

updated

7 lines of code changed in 1 file:

westram 2003-07-23 12:09 Rev.: 1546

- Help file for config merging

34 lines of code changed in 1 file:

westram 2003-07-23 11:59 Rev.: 1545

depends :|

9 lines of code changed in 1 file:

westram 2003-07-23 11:57 Rev.: 1544

layout changed (wider subwindows)

35 lines of code changed in 1 file:

westram 2003-07-23 11:56 Rev.: 1543

config merge button

39 lines of code changed in 1 file:

westram 2003-07-23 11:56 Rev.: 1542

config merge window

35 lines of code changed in 1 file:

westram 2003-07-23 11:55 Rev.: 1541

- added MG_merge_configs_cb, MG_create_config_awar

3 lines of code changed in 1 file:

westram 2003-07-23 11:55 Rev.: 1540

- added MG_configs.o

8 lines of code changed in 1 file:

westram 2003-07-23 11:55 Rev.: 1539

- untabified/indented
- minor changes

156 lines of code changed in 1 file:

westram 2003-07-23 11:55 Rev.: 1538

- added 'Transfer Configurations' button
- calls MG_create_config_awar

6 lines of code changed in 1 file:

westram 2003-07-23 11:55 Rev.: 1537

- windows and functions for config merging

233 lines of code changed in 1 file:

thomasw 2003-07-17 17:29 Rev.: 1536

statusmeldung verbessert - WT

8 lines of code changed in 1 file:

westram 2003-07-16 17:14 Rev.: 1535

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1 lines of code changed in 1 file:

westram 2003-07-16 17:14 Rev.: 1534

new module for juergen

56 lines of code changed in 6 files:

westram 2003-07-16 11:04 Rev.: 1533

- allow tear-off for menus

1 lines of code changed in 1 file:

westram 2003-07-16 11:04 Rev.: 1532

- added ST_sequence_ml::partial_match

57 lines of code changed in 2 files:

westram 2003-07-16 11:03 Rev.: 1531

- fileIndex now indexes 'fname' and 'dir/fname'

16 lines of code changed in 1 file:

westram 2003-07-16 11:02 Rev.: 1530

- define ap_assert

4 lines of code changed in 1 file:

westram 2003-07-16 11:01 Rev.: 1529

- insert partial sequences into tree
- remove_species_in_tree_from_hash -> NT_remove_species_in_tree_from_hash

390 lines of code changed in 1 file:

westram 2003-07-16 11:01 Rev.: 1528

- untabified
- uses dynamic cast

319 lines of code changed in 1 file:

westram 2003-07-16 11:01 Rev.: 1527

- untabified; assert->ap_assert

110 lines of code changed in 1 file:

westram 2003-07-16 11:00 Rev.: 1526

- menu layout

91 lines of code changed in 1 file:

westram 2003-07-16 11:00 Rev.: 1525

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66 lines of code changed in 3 files:

westram 2003-07-16 10:59 Rev.: 1524

- new member partial_match()

10 lines of code changed in 1 file:

westram 2003-07-16 10:58 Rev.: 1523

- untabified
- removed result of swap_sons()
- added get_branchlength() and set_branchlength() to AP_tree

155 lines of code changed in 1 file:

westram 2003-07-16 10:58 Rev.: 1522

- removed AP_sequence_protein_old
- added AP_sequence_protein::partial_match

5 lines of code changed in 1 file:

westram 2003-07-16 10:58 Rev.: 1521

- added functions to mark partial sequences
- remove_species_in_tree_from_hash -> NT_remove_species_in_tree_from_hash
- added function to mark/unmark species NOT in tree

173 lines of code changed in 1 file:

westram 2003-07-16 10:58 Rev.: 1520

- removed AP_sequence_protein_old
- AP_sequence_protein::partial_match

87 lines of code changed in 1 file:

westram 2003-07-16 10:57 Rev.: 1519

- AP_sequence_parsimony::partial_match

78 lines of code changed in 1 file:

westram 2003-07-16 10:57 Rev.: 1518

updated prototypes

3 lines of code changed in 1 file:

westram 2003-07-16 10:56 Rev.: 1517

- added AP_sequence_simple_protein::partial_match

71 lines of code changed in 2 files:

westram 2003-07-16 10:56 Rev.: 1516

- removed result of swap_sons()

1 lines of code changed in 1 file:

westram 2003-07-16 10:55 Rev.: 1515

- untabified
- mark_tree splitted into mark_species_in_tree and mark_species_in_tree_that
- mark_rest_tree splitted into mark_species_in_rest_of_tree and mark_species_in_rest_of_tree_that

147 lines of code changed in 2 files:

westram 2003-07-16 10:55 Rev.: 1514

updated

2 lines of code changed in 1 file:

westram 2003-07-16 10:54 Rev.: 1513

- fixed GBS_hash_first_element()

15 lines of code changed in 1 file:

westram 2003-07-16 10:54 Rev.: 1512

- added GBT_is_partial()
- added GBT_mark_all_that()

72 lines of code changed in 1 file:

westram 2003-07-16 10:54 Rev.: 1511

- warning fix

1 lines of code changed in 1 file:

westram 2003-07-16 10:53 Rev.: 1510

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3 lines of code changed in 1 file:

thomasw 2003-07-15 16:45 Rev.: 1509

ca_probe behandelt jetzt input von numMismatches -WT

26 lines of code changed in 2 files:

westram 2003-07-08 16:48 Rev.: 1508

prots updated

4 lines of code changed in 2 files:

westram 2003-07-08 16:48 Rev.: 1507

- added gb_rename_entry()

19 lines of code changed in 1 file:

westram 2003-07-08 16:47 Rev.: 1506

- added gb_rename, GB_rename

43 lines of code changed in 1 file:

westram 2003-07-08 16:47 Rev.: 1505

minor change

4 lines of code changed in 1 file:

westram 2003-07-08 16:46 Rev.: 1504

- GB_rename -> GB_rename_file

8 lines of code changed in 5 files:

westram 2003-07-08 16:45 Rev.: 1503

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12 lines of code changed in 1 file:

westram 2003-07-08 16:01 Rev.: 1502

test code

30 lines of code changed in 1 file:

westram 2003-07-03 09:11 Rev.: 1501

- untabified
- changed hotkeys

111 lines of code changed in 1 file:

westram 2003-07-03 08:39 Rev.: 1500

- defines for parsimony behavior

46 lines of code changed in 1 file:

westram 2003-07-03 08:39 Rev.: 1499

- AP_sequence_protein::combine()
+ gaps are forwarded upwards again
+ multiple gaps are multiple mutations again

14 lines of code changed in 1 file:

westram 2003-07-03 08:39 Rev.: 1498

- AP_sequence_parsimony::combine()
+ gaps are forwarded upwards again
+ multiple gaps are multiple mutations again

12 lines of code changed in 1 file:

thomasw 2003-07-01 17:06 Rev.: 1497

Einlesen des input-Files verbessert - WT

84 lines of code changed in 1 file:

June 2003 »

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