December 2011 Commit Log

Number of Commits:
34
Number of Active Developers:
2
westram 2011-12-23 15:13 Rev.: 8327


- clang static analyzer working

13 lines of code changed in 2 files:

westram 2011-12-23 13:01 Rev.: 8326


- clang-fix: workaround non-standard header wrapper for stdarg.h

2 lines of code changed in 1 file:

westram 2011-12-23 13:00 Rev.: 8325


- clang-fix: accept version 4.2 when compiling with clang

22 lines of code changed in 1 file:

westram 2011-12-23 12:57 Rev.: 8324


- clang-fix: explicitely pass language type to compiler when .c is compiled as c++

3 lines of code changed in 3 files:

westram 2011-12-23 12:56 Rev.: 8323


- clang-fix: template instantiation depends on template order

50 lines of code changed in 1 file:

westram 2011-12-23 12:56 Rev.: 8322


- clang-fix: replace auto-arrays of non-POD types by dynamic memory

7 lines of code changed in 2 files:

westram 2011-12-23 12:44 Rev.: 8321


- the daily wtf

3 lines of code changed in 1 file:

arb_build 2011-12-23 10:26 Rev.: 8320

- skip test compilation of perl scripts when cross-compiling

8 lines of code changed in 1 file:

westram 2011-12-21 12:04 Rev.: 8319


* ignored PERL2ARB interface as referrer (to detect functions that are only used from perl)
- moved several functions to static scope or removed them (partly reverted by [13155])
- for some functions it's ok to be only used from perl (e.g. macro support functions). Added comments there!
* there is still some dead code in there, e.g.
- read-security is implemented, but unused (and unwanted)

112 lines of code changed in 21 files:

westram 2011-12-21 11:17 Rev.: 8318


* repaired compile-tests for delivered perl-macros and -scripts
- was broken by [6318]
- now tests whether Lint/LintSubs is installed
* if not installed -> accept failure
* if installed -> fail compilation if scripts do not compile
- test whether Bioperl is installed
* if not installed -> accept failure on scripts in BIOPERL folder
* if installed -> fail compilation if scripts there do not compile

68 lines of code changed in 6 files:

westram 2011-12-21 11:01 Rev.: 8317


- proto for [8316]

1 lines of code changed in 1 file:

westram 2011-12-21 11:00 Rev.: 8316


- reverted part of [8313] and [8315] (fixing one perl script)

4 lines of code changed in 1 file:

westram 2011-12-20 15:54 Rev.: 8315


* wrapped some UNIT_TESTS / DEBUG code

(partly reverted by [8316])

13 lines of code changed in 3 files:

westram 2011-12-20 15:35 Rev.: 8314


* removed AISC debug code

1 lines of code changed in 3 files:

westram 2011-12-20 15:11 Rev.: 8313


* removed dead code

(partly reverted by [8316])

20 lines of code changed in 49 files:

westram 2011-12-20 14:49 Rev.: 8312


- corrected refs wrong since [7781]

3 lines of code changed in 3 files:

westram 2011-12-20 14:33 Rev.: 8311


* splitted pseudo-module ps_pg_tree_functions.cxx into two headers
* some functions inline instead of static

131 lines of code changed in 8 files:

westram 2011-12-20 12:55 Rev.: 8310


- revert part of [8309] to fix TRACE_ALLOCS

8 lines of code changed in 4 files:

westram 2011-12-20 12:29 Rev.: 8309


* moved much code into static scope

(partly reverted by [8310])

3085 lines of code changed in 244 files:

westram 2011-12-20 12:27 Rev.: 8308


* script to detect global symbols which are only used local
- useful to find candidates for static scope (which then may reveal dead code)

229 lines of code changed in 1 file:

westram 2011-12-13 14:01 Rev.: 8302


* merges [8301] from stable and fixes conflicts with partly duplicate [6600]

49 lines of code changed in 4 files:

westram 2011-12-12 15:52 Rev.: 8300


- cppchecked (1.52)

21 lines of code changed in 11 files:

westram 2011-12-12 12:40 Rev.: 8297


- added dependency LOCATION -> links_non_perl (compilation failed depending on number of cores since [8250])
- added notes about when its neccessary to add such dependencies

18 lines of code changed in 2 files:

westram 2011-12-09 13:43 Rev.: 8292


- ptserver crashed when designing probes for species with empty data (only gaps) or too few nucs (less than probe len) [fixed and print warnings]

21 lines of code changed in 2 files:

westram 2011-12-09 13:02 Rev.: 8291


- crashed when showing NDS list of marked species and deleting all marked [fixed]

1 lines of code changed in 1 file:

westram 2011-12-08 18:05 Rev.: 8285


* automatic changes to generated headers caused by [8284]

314 lines of code changed in 6 files:

westram 2011-12-08 18:04 Rev.: 8284


* problem:
- order of files in generated headers depended on the order reported by makes '$(wildcard ...)'
- make in suse12.1 changed that order slightly
* aisc_mkpts now sorts filenames of input-files
* moved a few header promotions

21 lines of code changed in 3 files:

westram 2011-12-08 14:50 Rev.: 8283


- compile on suse 12.1

17 lines of code changed in 3 files:

westram 2011-12-07 14:47 Rev.: 8280


* fixed indentation

314 lines of code changed in 1 file:

westram 2011-12-07 14:33 Rev.: 8279


* moved AW_window awar-create/read/write into member-functions
* several fixes related to [8278]
- if window-position is unknown in expose callback
* set it again from awars and
* delay WM_offset calculation using timed-callback
- never save values into awars, if WM_offsets have not been calculated
- make sure that window-position set and stored-in-awars is the same (in show_internal)
* needed for correct WM_offset-calculation
* popup-windows which are repositioned on show, no longer popup on (old) wrong position and then jump to wanted position (instead they instantly appear at wanted position).
- only add expose-callback once
* changed behavior of modal prompter windows
- faster reaction (100ms instead of 500ms delay)
- the window is not centered on mouse pos, instead its just moved that far that the mouse is inside the window.
- considers WM_offsets
- fallback to center-jump if window-position is unknown

140 lines of code changed in 4 files:

westram 2011-12-05 11:50 Rev.: 8278


* fix ARB<>Unity incompatibilities
- buttons of freshly generated ARB windows were clickable, but nothing happened when clicked.
* Slightly moving the window or otherwise triggering an expose-callback fixed that behavior, but only for this window.
- changes for this fix
* the hack to calculate the WM-offsets failed, since unity does not provide the already-set, but not yet exposed window-position
- assume that the values in awars are correct and use them to set position (again)
* unity forgets window position when hiding a window. ARB did not restore the previously used position and button again where w/o effect. fixed by:
- store position on hide
- always set position in show_internal

49 lines of code changed in 4 files:

westram 2011-12-01 11:41 Rev.: 8273


- removed dead ALIV3

2 lines of code changed in 35 files:

westram 2011-12-01 11:34 Rev.: 8272


- more warnings

3 lines of code changed in 2 files:

westram 2011-12-01 11:25 Rev.: 8271


- fixed global shadow warnings (dont know exactly what was shadowed here.. maybe some global type?)

32 lines of code changed in 2 files:

November 2011 »

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