September 2015 Commit Log

Number of Commits:
32
Number of Active Developers:
1
westram 2015-09-28 14:19 Rev.: 14370


* since [14054] updating WC to HEAD _always_ changed ARBDB => always caused _all_ unittests to run again
- instead read revision from generated file ({{{lib/revision_info.txt}}})

34 lines of code changed in 6 files:

westram 2015-09-27 10:35 Rev.: 14358


* remove {{{-Wl,-noinhibit-exec}}}
- fixes missing link-error issue (see [14355], [14357])

6 lines of code changed in 1 file:

westram 2015-09-25 15:21 Rev.: 14357


* dont use {{{-Wl,--no-undefined}}} for OSX (fixes [14355])

19 lines of code changed in 1 file:

westram 2015-09-25 14:48 Rev.: 14355


* linking executables with undefined symbols did NOT fail build. fixed.
- maybe introduced by #618 or by [12972]

1 lines of code changed in 1 file:

westram 2015-09-18 08:32 Rev.: 14315


* attempt to get rid of perl-locale-spam in build-logs

8 lines of code changed in 1 file:

westram 2015-09-15 13:19 Rev.: 14296


* document CTRL-keybindings available in EDIT4

58 lines of code changed in 5 files:

westram 2015-09-15 13:17 Rev.: 14295


* another attempt to fix {{{jump_sequence_pos}}} (see also [12129])
- if sequence pos is hidden (by "hide gaps") => use adjacent positions (preferring right over left)
- fix {{{ED4_remap::is_shown}}} (complicated due to broken design of values stored in {{{sequence_to_screen_tab}}})

40 lines of code changed in 3 files:

westram 2015-09-10 11:17 Rev.: 14281


* GDE commands failed to read sequence filter settings
- was broken by [14118]

11 lines of code changed in 3 files:

westram 2015-09-08 18:41 Rev.: 14275


* fix SEGV when opening config manager (and configs w/o comment exist)

2 lines of code changed in 1 file:

westram 2015-09-08 13:46 Rev.: 14274


* EDIT4 options window
- add scalers for seq<>seq, seq<>helix spacing and hiding nucleotides
- layout fixes

40 lines of code changed in 3 files:

westram 2015-09-08 12:45 Rev.: 14273


* pass refresh callback as typed callback
- Note: IIRC this is the first use of a (pointer to a static) typed callback as parameter of another typed callback

24 lines of code changed in 5 files:

westram 2015-09-07 18:32 Rev.: 14272


* typed most popup-callbacks (+tested macro IDs)

31 lines of code changed in 5 files:

westram 2015-09-07 17:34 Rev.: 14271


* no longer use deprecated {{{GB_get_error}}}

6 lines of code changed in 1 file:

westram 2015-09-07 16:58 Rev.: 14269


* sync menu entry 'Frame settings' (and mark motif only where missing)
* merge some gtk-only application code into trunk (not compiled there)

33 lines of code changed in 6 files:

westram 2015-09-07 14:41 Rev.: 14268


* EDIT4: fix load/save config layout

50 lines of code changed in 3 files:

westram 2015-09-07 14:30 Rev.: 14267


* macro execution of client-commands (e.g. EDIT4 commands) was broken by [13764]
- perl client was attempting to receive a NULL-container
- failed in most cases; succeeded only if client started up very quickly..

1 lines of code changed in 1 file:

westram 2015-09-07 10:08 Rev.: 14266


* rename config save/load functions

13 lines of code changed in 3 files:

westram 2015-09-07 10:03 Rev.: 14265


* cleanup prototype mess

64 lines of code changed in 1 file:

westram 2015-09-07 09:40 Rev.: 14264


* fix macro IDs for 2nd editor window

11 lines of code changed in 1 file:

westram 2015-09-04 16:40 Rev.: 14263


* refactored {{{ED4_base::generate_configuration_string}}}
- uses GBS_strstruct (avoiding extensive reallocations)
- no longer (temp.) modifies consensus position inside group (instead call consensus first, rest afterwards)

65 lines of code changed in 4 files:

westram 2015-09-04 16:03 Rev.: 14262


* fix a buffer-overflow (by strlen) in {{{ED4_base::generate_configuration_string}}}

3 lines of code changed in 1 file:

westram 2015-09-04 12:55 Rev.: 14261


* document howto copy&paste

52 lines of code changed in 5 files:

westram 2015-09-04 11:42 Rev.: 14259


* belongs to [14258]

15 lines of code changed in 1 file:

westram 2015-09-04 11:41 Rev.: 14258


* ARB help
- added history of visited help topics
- reuse tempfile for repeated searches
- pressing ENTER in search field runs search
- relayout GUI
- display less useless message when "no help" is displayed

102 lines of code changed in 2 files:

westram 2015-09-02 16:31 Rev.: 14256


* reintegrates 'config' into 'trunk' (implements #607)
* adds: log:branches/config@14199:14255

752 lines of code changed in 29 files:

westram 2015-09-02 16:01 Rev.: 14253


* fix window ID for message windows (broken by [14232])

1 lines of code changed in 1 file:

westram 2015-09-02 14:58 Rev.: 14250


* increase timeout for dbserver startup (1-2 seconds -> >60 seconds)

1 lines of code changed in 1 file:

westram 2015-09-02 08:09 Rev.: 14241


* doc {{{GBT_store_marked_species}}} and related

15 lines of code changed in 1 file:

westram 2015-09-02 07:56 Rev.: 14240


* added assertion against late restore of species marks

5 lines of code changed in 1 file:

westram 2015-09-01 16:57 Rev.: 14239


* add GB_USERFLAG_WASMARKED
* rename {{{GB_set_user_flag}}} -> {{{GB_raise_user_flag}}}
* add {{{GB_write_user_flag}}}

12 lines of code changed in 6 files:

westram 2015-09-01 09:46 Rev.: 14232


* allow to specify window ID of {{{AW_window_message}}}
- use for question window to avoid clash of macro IDs for 'HELP' button

15 lines of code changed in 3 files:

westram 2015-09-01 09:42 Rev.: 14231


* unTABify

3 lines of code changed in 1 file:

August 2015 »

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