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94 lines of code changed in 7 files:
* AW_preset.cxx: - added a help button to color properties/color group properties
12 lines of code changed in 1 file:
increased size and added $elapsed
33 lines of code changed in 1 file:
* mkptypes.c: - if parameter contains only one word -> add dummy name (past: added int-type)
54 lines of code changed in 1 file:
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16 lines of code changed in 1 file:
messages
21 lines of code changed in 2 files:
* probe_tree.hxx: - untabified
- changed PTM_MAX_TABLES from 64 to 256
211 lines of code changed in 1 file:
* PT_prefixtree.cxx: - untabified, messages
500 lines of code changed in 1 file:
* PT_buildtree.cxx: - untabified, messages
318 lines of code changed in 1 file:
* adsocket.c: - prints detection of memsize
- now occupies 95% of memory
15 lines of code changed in 1 file:
* admap.c: - 'Opening FastLoad File' only appears when ARB really opened such a file
7 lines of code changed in 1 file:
* AW_status.cxx: - untabified and indented
- added AWAR-defines
- added time estimation
- hide-delay now increases with each press of HIDE button
227 lines of code changed in 1 file:
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2 lines of code changed in 1 file:
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1 lines of code changed in 1 file:
* adseqcompr.c: - untabified
82 lines of code changed in 1 file:
* ad_load.c: - changes printed messages
3 lines of code changed in 1 file:
* probe.h: - untabified
85 lines of code changed in 1 file:
* PT_main.cxx: - more messages
11 lines of code changed in 1 file:
* PT_io.cxx: - activated verbose mode
- more diagnostic messages
62 lines of code changed in 1 file:
re-enabled pt-server fastload file
1 lines of code changed in 1 file:
test
2 lines of code changed in 1 file:
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4 lines of code changed in 2 files:
* ad_spec.cxx: - hotkey fixes
- first menu of species information is now named ORGANISM if in organism window
14 lines of code changed in 1 file:
* NT_extern.cxx: - hotkey fixes
3 lines of code changed in 1 file:
* GEN_map.cxx: - menu/hotkey fixes
63 lines of code changed in 1 file:
* GEN_interface.cxx: - untabified and indented
- hotkey fixes
63 lines of code changed in 1 file:
* GEN_gene.cxx: - ARB crashed when a species with no data in GENOM_ALIGNMENT was selected and
GENE_MAP was open
30 lines of code changed in 1 file:
* EXP_main.cxx: - menu/hotkey fixes
8 lines of code changed in 1 file:
* EXP_interface.cxx: - hotkey fixes
41 lines of code changed in 1 file:
* AWT_tree_cb.cxx: - hotkey fixes
2 lines of code changed in 1 file:
* oldhelp/species_join.hlp: - merged some text from old help (join_species.hlp)
2 lines of code changed in 1 file:
* ad_ali.cxx: - untabified, indented and valgrinded
31 lines of code changed in 1 file:
* NT_join.cxx: - wasn't able to join sub-containers recursively
35 lines of code changed in 1 file:
* NT_extern.cxx: - No security level in DEBUG mode
4 lines of code changed in 1 file:
* AP_pos_var_pars.cxx: - untabified, indented and valgrinded
32 lines of code changed in 1 file:
valgrinded
1 lines of code changed in 1 file:
* AWTC_rename.cxx: - valgrinded, untabified and indented
36 lines of code changed in 1 file:
* AWT_pro_a_nucs.cxx: - untabified and indented
236 lines of code changed in 1 file:
* AWT_filter.cxx: - untabified, indented and valgrinded
36 lines of code changed in 1 file:
* AWT_csp.cxx: - valgrinded
248 lines of code changed in 1 file:
- valgrinded
- untabified, indented and valgrinded
85 lines of code changed in 1 file:
* GDE_FileIO.cxx: - fixed an undetected IO error
807 lines of code changed in 1 file:
* arbdb.c: - assert GB_create is not used to create containers
7 lines of code changed in 1 file:
* adstring.c: - GBS_read_dir stops at first subdirectory
16 lines of code changed in 1 file:
* oldhelp/species_join.hlp: - merged some text from old help (join_species.hlp)
19 lines of code changed in 1 file:
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295 lines of code changed in 5 files:
added AW_window::all_menus_created
4 lines of code changed in 1 file:
* AW_window.cxx: - insert_menu_topic checks for correct mnemonic
- boosted mnemonic-checking
216 lines of code changed in 1 file:
* ad_spec.cxx: - hotkey fixes
4 lines of code changed in 1 file:
* NT_join.cxx: - untabified, indented and valgrinded
143 lines of code changed in 1 file:
* NT_extern.cxx: - join+merge -> submenu, delete w/o submenu
- hotkey fixes
105 lines of code changed in 1 file:
- hotkeys
45 lines of code changed in 15 files:
* align.menu: - hotkeys
10 lines of code changed in 1 file:
* ARB_GDEmenus.source: - changes in menu text
- added itemmeta (aka hotkey)
7 lines of code changed in 1 file:
* ED4_root.cxx: - hotkey fixes
8 lines of code changed in 1 file:
* AWT_input_mask.cxx: - valgrind fix
5 lines of code changed in 1 file:
* AWT_tree_cb.cxx: - changed output of NT_count_mark_all_cb
- untabified and indented
- prints number to menu (needed for hotkeys)
51 lines of code changed in 1 file:
* GDE_menu.h: - untabified
39 lines of code changed in 1 file:
* GDE_ParseMenu.cxx: - untabified and indented
341 lines of code changed in 1 file:
* GDE.cxx: - untabified and indented
- fixed RUI (was passing '&char' as 'const char *' - ARGH!)
138 lines of code changed in 1 file:
* ad_load.c: - changed startup messages
6 lines of code changed in 1 file:
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3 lines of code changed in 1 file:
added make doc
4 lines of code changed in 1 file:
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1 lines of code changed in 1 file:
layout fixes
10 lines of code changed in 1 file:
* ad_transpro.cxx: - asks to increase dest-ali-length (not working yet)
22 lines of code changed in 1 file:
* ad_transpro.cxx: - untabified, indented and valgrind-fixes
- removed 'codon_start and transl_table entries found for all taxa' message
(occurred when NOT using these entries)
119 lines of code changed in 1 file:
* ad_ali.cxx: - changed length of length-textfield
1 lines of code changed in 1 file:
* ED4_root.cxx: - Shows alignment name in window title
2 lines of code changed in 1 file:
* AWT_codon_table.cxx: - rewrote AWT_is_codon (returns failure-reason)
128 lines of code changed in 2 files:
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50 lines of code changed in 2 files:
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166 lines of code changed in 2 files:
removed debugging output
3 lines of code changed in 1 file:
creates ARBMACROHOME
output changed slightly
14 lines of code changed in 1 file:
darwin fixes from ben
3 lines of code changed in 1 file:
* aw_root.hxx: - format attributes declared
12 lines of code changed in 1 file:
* arb_help2xml.cxx: - format attribute declared
11 lines of code changed in 1 file:
* awtc_seq_search.hxx: - format attribute for AWTC_message()
8 lines of code changed in 1 file:
* AWT_tree.cxx: - format fix
1 lines of code changed in 1 file:
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7 lines of code changed in 3 files:
* Makefile: - changed order of build (in all:)
1 lines of code changed in 1 file:
* probe_design.cxx: - format string fix
1 lines of code changed in 1 file:
* adsocket.c: - format fix
1 lines of code changed in 1 file:
* AP_main.cxx: - format fix
1 lines of code changed in 1 file:
* AP_error.hxx: - untabified
13 lines of code changed in 1 file:
* AWTC_constructSequence.cxx: - untabified and indented
255 lines of code changed in 1 file:
* careful.c: - untabified and indented
- const fixes
34 lines of code changed in 1 file:
* ED4_root.cxx: - compilation error for yadhu
4 lines of code changed in 1 file:
* arb_proto_2_xsub.cxx: - untabified and indented
- better errors
- can handle multi-line-C-comments
191 lines of code changed in 1 file:
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177 lines of code changed in 4 files:
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0 lines of code changed in 1 file:
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353 lines of code changed in 7 files:
* Makefile: - added -DDEVEL_XXX (for developer specific test stuff)
- added -DGNU for linux
22 lines of code changed in 1 file:
* AW_button.cxx: - format fixes
1 lines of code changed in 1 file:
* probe_design.cxx: - format string fix
- untabified
81 lines of code changed in 1 file:
* GEN_map.cxx: - format string fix
1 lines of code changed in 1 file:
* ED4_edit_string.cxx: - format string fix
1 lines of code changed in 1 file:
* AWT_asciiprint.cxx: - format fixes
1 lines of code changed in 1 file:
* AWT_advice.cxx: - format fixes
2 lines of code changed in 1 file:
* ad_trees.cxx: - untabified, indented and formats fixed
269 lines of code changed in 1 file:
* ad_spec.cxx: - format string fix
3 lines of code changed in 1 file:
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1 lines of code changed in 1 file:
* lenstring.h: - const fix
- untabified
5 lines of code changed in 1 file:
* lenstring.c: - const fix
7 lines of code changed in 1 file:
* io_arbdb.c: - unused variables
223 lines of code changed in 1 file:
* careful.h: - const fix
1 lines of code changed in 1 file:
* careful.c: - const fix
2 lines of code changed in 1 file:
remade
64 lines of code changed in 4 files:
* arbdb.c: - formats fixed
3 lines of code changed in 1 file:
* adtools.c: - untabified and formats fixed
148 lines of code changed in 1 file:
* adtables.c: - untabified and formats fixed
35 lines of code changed in 1 file:
* adstring.c: - added __attribute__ to GB_export_error, GBS_global_string, GBS_global_string_copy
25 lines of code changed in 1 file:
* adsocket.c: - untabified and formats fixed
52 lines of code changed in 1 file:
* adquery.c: - untabified, indented and formats fixed
477 lines of code changed in 1 file:
* adperl.c: - untabified, indented and formats fixed
12 lines of code changed in 1 file:
* adcomm.c: - untabified and formats fixed
221 lines of code changed in 1 file:
* ad_save_load.c: - formats fixed
4 lines of code changed in 1 file:
* ad_load.c: - formats fixed
1 lines of code changed in 1 file:
* adTest.c: - format string fix
1 lines of code changed in 1 file:
* Makefile: - added -g to aisc_mkpt calls
8 lines of code changed in 1 file:
* mkptypes.c: - untabified
- new flag -g (searches for __attribute__ and propagates it to the header)
165 lines of code changed in 1 file:
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53 lines of code changed in 3 files: