May 2015 Commit Log

Number of Commits:
14
Number of Active Developers:
2
westram 2015-05-30 13:37 Rev.: 13845


- remove executable flag

0 lines of code changed in 34 files:

westram 2015-05-30 11:03 Rev.: 13837


- OSX build fails randomly when make is called with '-j 2'[[BR]]
failure excerpt:
{{{
make -C bin all
find . -type l -exec rm {} \;
find . -type l -exec rm {} \;
make scriptlinks mafftlinks
make scriptlinks mafftlinks
ln -s -f `find ../SH -perm -100 ! -type d -print` .
ln -s -f `find ../SH -perm -100 ! -type d -print` .
ln: ./arb: File exists
ln -s -f `find ../PERL_SCRIPTS -perm -100 ! -type d ! -path '*/IFTHELP/*' ! -path '*/TESTS/*' -print` .
make[3]: *** [scriptlinks] Error 1
make[2]: *** [all] Error 2
make[1]: *** [binlink] Error 2
make[1]: *** Waiting for unfinished jobs....
[...]
generate_all_links.sh done.
touch SOURCE_TOOLS/stamp.generate_all_links
make: *** [arb] Error 2
}}}
* {{{make -C bin all}}} only occurs once in log
* target {{{scriptlinks}}} executed twice (bug in make?)

3 lines of code changed in 1 file:

westram 2015-05-27 14:12 Rev.: 13821


* implements #651

534 lines of code changed in 7 files:

westram 2015-05-27 06:50 Rev.: 13818


- do not use more than 80% of cores
- run at least 2 jobs (on single cores)

1 lines of code changed in 1 file:

westram 2015-05-25 09:19 Rev.: 13817


* avoid a race condition (occurring on new build server)

10 lines of code changed in 1 file:

westram 2015-05-22 19:00 Rev.: 13816


* merge [13810:13815] from 'pars' into 'trunk'
- jenkins multicore build
* adds:
- log:branches/pars@13811:13815

22 lines of code changed in 2 files:

westram 2015-05-22 11:55 Rev.: 13809


* merge [13805] from '!ProbeMatchCollection' into 'trunk'

24 lines of code changed in 2 files:

westram 2015-05-22 11:47 Rev.: 13808


* arb_probe
- no longer silently force parameter value into allowed range (report error instead)
- assert default value is inside allowed range (fix for parameter 'iterate')
- remove CLI-arguments w/o '='

27 lines of code changed in 1 file:

westram 2015-05-22 11:37 Rev.: 13807


* merge arb_probe changes from '!ProbeMatchCollection' into 'trunk'
* adds:
- log:branches/ProbeMatchCollection@13802,13806

47 lines of code changed in 1 file:

westram 2015-05-20 08:50 Rev.: 13799


- adds some experimental asan options (commented out)

3 lines of code changed in 1 file:

westram 2015-05-20 08:48 Rev.: 13798


* callallcallbacks
- exclusion/pass check failed for nested macro IDs
- exclude UNDO

11 lines of code changed in 1 file:

epruesse 2015-05-01 23:41 Rev.: 13797

fix spelling of likelihood

36 lines of code changed in 7 files:

westram 2015-05-01 11:33 Rev.: 13796


* {{{GB_sort}}}: accept NULL-pointer as array if sorted range size is zero
- happens e.g. when sorting empty {{{CharPtrArray}}}

12 lines of code changed in 2 files:

westram 2015-05-01 10:09 Rev.: 13795


* improve hash quality
- avoid "left shift of negative value" reported by sanitizer (lost bits of hash key)
- ~~change hash size to prime~~ (reapplied by [15524])

3 lines of code changed in 2 files:

April 2015 »

Generated by StatSVN 0.7.0