Directory | Changes | Lines of Code | Lines per Change |
---|---|---|---|
Totals | 136 (100.0%) | 13042 (100.0%) | 95.8 |
lib/ | 1 (0.7%) | 8474 (65.0%) | 8474.0 |
PROBE_WEB/CLIENT/ | 64 (47.1%) | 2058 (15.8%) | 32.1 |
NTREE/ | 23 (16.9%) | 1336 (10.2%) | 58.0 |
TOOLS/ | 3 (2.2%) | 425 (3.3%) | 141.6 |
PERL_SCRIPTS/MAUS/ | 5 (3.7%) | 259 (2.0%) | 51.8 |
HELP_SOURCE/oldhelp/ | 9 (6.6%) | 121 (0.9%) | 13.4 |
SH/ | 2 (1.5%) | 115 (0.9%) | 57.5 |
PERL2ARB/ | 4 (2.9%) | 115 (0.9%) | 28.7 |
PROBE_WEB/SERVER/ | 2 (1.5%) | 57 (0.4%) | 28.5 |
lib/pictures/ | 2 (1.5%) | 26 (0.2%) | 13.0 |
/ | 4 (2.9%) | 19 (0.1%) | 4.7 |
ARBDB/ | 6 (4.4%) | 12 (0.1%) | 2.0 |
GDEHELP/MENUS/ | 2 (1.5%) | 11 (0.1%) | 5.5 |
SOURCE_TOOLS/ | 1 (0.7%) | 7 (0.1%) | 7.0 |
HELP_SOURCE/ | 5 (3.7%) | 4 (0.0%) | 0.8 |
GENOM_IMPORT/ | 1 (0.7%) | 1 (0.0%) | 1.0 |
GDE/CORE/ | 1 (0.7%) | 1 (0.0%) | 1.0 |
AWT/ | 1 (0.7%) | 1 (0.0%) | 1.0 |
- solaris fixes
8 lines of code changed in 1 file:
- uncommented symlinks to .sl
7 lines of code changed in 1 file:
- explicitely call bash
1 lines of code changed in 1 file:
- removed enconding (unneccessary)
2 lines of code changed in 1 file:
- removed DOS linefeeds
0 lines of code changed in 2 files:
missing #include <iostream> to declare (std::)cout added
1 lines of code changed in 1 file:
recognize force option in the form -force=1; for experts only
1 lines of code changed in 1 file:
Maus filtering removed from GDE import menu
0 lines of code changed in 1 file:
added help file for Maus. I don't know on which place I have to add it also.
I hope this work with this single check in. Xml-version not add manually yet.
0 lines of code changed in 1 file:
updated mausdriver.pl command line options to final version in GDE Menu
11 lines of code changed in 1 file:
debug print statements disabled, no global eval for die-exceptions yet
16 lines of code changed in 2 files:
Interface slightly modified:
accession numbers to be looked for, exclude accession numbers
and version numbers can be supplied as quoted list as well as from file.
All filtering functions implemented, log function not yet.
242 lines of code changed in 2 files:
Introduction of wrapper class for simple modal dialogs
Accepts a vector of strings for the buttons and returns the clicked button's name
see DialogDriver.java for usage
31 lines of code changed in 2 files:
Integration of functions to save results:
-details and probe list in separate files,
-saving of configuration in the same way possible by using result type string
-all output is written as one string to disk
-no confirmation dialog on selection of already existing files yet
-no confirmation dialog abort or save failure yet
154 lines of code changed in 6 files:
first prototype of IOManager added
IOManager acts as wrapper for file input/output operations
not integrated with menu yet
I added this at this stage just for completeness reasons
66 lines of code changed in 2 files:
solaris changes
5 lines of code changed in 3 files:
wrong newline removewrong newline removedd
1 lines of code changed in 1 file:
Linker flag changed from -fpic to -fPIC because google says -fpic may cause trouble on some architectures; ARB compiles now on solaris until it reaches ARB/PROBE_DESIGN/probe_design.cxx;
5 lines of code changed in 1 file:
poster version;
probe sequence, melting temperatur, GC content and unordered hit list
displayed in bottom window
group names disabled, colors of scrollbars disabled
most stuff hacked in Client class
103 lines of code changed in 4 files:
ActinoListener for probeList added, act on doubleclick, no further selection
of listItem necessary
minor modifications in other classes;
matchProbes works in most cases; no parsion of anser yet
66 lines of code changed in 3 files:
(39 more)