Directory GDE/MAFFT/

Directory Created:
2013-07-23 13:04
Total Files:
1
Deleted Files:
0
Lines of Code:
55

[root]/GDE/MAFFT
            Folder removed from repo mafft-7.053-without-extensions (0 files, 0 lines)
                Folder removed from repo core (0 files, 0 lines)
                Folder removed from repo scripts (0 files, 0 lines)
            directory in repo mafft-7.055-with-extensions (4 files, 309 lines)
                directory in repo core (90 files, 75630 lines)
                directory in repo extensions (3 files, 72 lines)
                    directory in repo mxscarna_src (21 files, 6911 lines)
                        directory in repo probconsRNA (20 files, 7594 lines)
                        directory in repo vienna (6 files, 11842 lines)

Lines of Code

GDE/MAFFT/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 10 (100.0%) 84 (100.0%) 8.4
westram 6 (60.0%) 43 (51.2%) 7.1
aboeckma 3 (30.0%) 36 (42.9%) 12.0
epruesse 1 (10.0%) 5 (6.0%) 5.0

Most Recent Commits

westram 2016-12-30 12:17 Rev.: 15483


* partial merge from 'warnings' into 'trunk'
- no spam from GDE (filter compiler warnings, do not request vectorizer info)
- remove leftover occurrences of {{{grep -P}}} (harmless for OSX; only used for targets 'tags' and 'ut')
* adds: log:branches/warnings@15469:15470,15472,15474:15475,15479:15480

6 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (+6 -2)
epruesse 2014-08-03 14:14 Rev.: 12660

add some files to make clean

5 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (+5 -1)
westram 2014-03-04 19:15 Rev.: 11740


* remove directories 'binaries' and 'scripts' from SVN and generate them from Makefile

15 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (+15 -5)
westram 2013-09-04 09:58 Rev.: 10530


* UTF8 -> ASCII

1 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (+1 -1)
westram 2013-08-23 12:30 Rev.: 10479


* async GDE build
- pass down make flags (esp. -j) into subdirectories
- enclose subbuilds in $(SEP) as in main ARB Makefile (showing enter/exit timestamp for each subdir)
- mafft: build/clean core+extensions async
- mrbayes:
* define proper rules to make target 'mb' work with -j (no idea why that is needed)
* do not clear MAKEFLAGS in caller Makefile
- speedup for 'build' (on 8 cores)
* after GDE clean: 60s -> 30s
* after MrBAYES clean: 44s -> 17s

17 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (+17 -7)
aboeckma 2013-08-08 13:40 Rev.: 10421

Fixed bug in mafft makefile

3 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (+3)
aboeckma 2013-07-31 11:15 Rev.: 10372

updated mafft version

5 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (+5 -3)
westram 2013-07-26 08:54 Rev.: 10362


* '''force''' gcc for MAFFT

1 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (+1 -1)
westram 2013-07-26 08:48 Rev.: 10361


* force gcc for MAFFT

3 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (+3 -9)
aboeckma 2013-07-23 13:04 Rev.: 10343

Added mafft

28 lines of code changed in 1 file:

  • GDE/MAFFT: Makefile (new 28)
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