[root]/GDE/TREEPUZZLE
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doc
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src
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Author | Changes | Lines of Code | Lines per Change |
---|---|---|---|
Totals | 49 (100.0%) | 1175 (100.0%) | 23.9 |
jobb | 19 (38.8%) | 923 (78.6%) | 48.5 |
westram | 29 (59.2%) | 155 (13.2%) | 5.3 |
yadhu | 1 (2.0%) | 97 (8.3%) | 97.0 |
* introduce {{{onlyC_flags}}}
- flags used for C compilation only.
- similar to {{{cxxflags}}} (references added).
- pass down onlyC_flags into AxML, CLUSTAL, CLUSTALW, FASTDNAML, FASTTREE, GL, MrBAYES, PHYLIP, PHYML*, RAxML, SINA(unused), SOURCE_TOOLS, SUPPORT, TOOLS, TREEGEN + TREEPUZZLE.
- set flags to {{{-Werror-implicit-function-declaration}}}
* error is only effective in a small part of these modules.
* TODO: need to activate warnings -> will activate the error as well.
1 lines of code changed in 1 file:
* reintegrates 'vectorize' into 'trunk'
- adds vectorization check for gcc 4.9.x / NDEBUG compile
* adds:
- log:branches/vectorize@13428:13442
1 lines of code changed in 1 file:
* renamed include variables
1 lines of code changed in 1 file:
- renamed
* ACC -> A_CC
* CPP -> A_CXX (misleading atm, since it contains c++flags)
2 lines of code changed in 1 file:
- effect of [9574] (comments only)
1 lines of code changed in 1 file:
* compiler-messages (merges [6848] [6849] [6850] [6851] [6853] [6855] [6856] [6860] from refactor)
- errors get listed before warnings
- pipe all compilations through postcompile filter
- optionally filter warnings and/or stop at 1st error (controllable by POST_COMPILE in ARB Makefile)
- no warnings for ptpan (too many; version in trunk is outdated)
1 lines of code changed in 1 file:
* Changed variable transfer to sub-makefiles
- most variables are now exported via environment (using SOURCE_TOOLS/export2sub or AISC/export2sub)
- only variables that contain different values for different sub-makefile-calls are passed by cl (e.g. cflags, MAIN)
- changed flavour of exported variables (recursively expanded -> simply expanded variables). Please use VAR := VALUE in Makefiles (not VAR = VALUE). See http://www.gnu.org/software/make/manual/html_node/Flavors.html#Flavors for details
* removed/fixed all undefined variables in Makefiles (using 'make --warn-undefined-variables')
* changed names of compile-logs generated in GDE subdir
* added target 'xmlin' (broken, print warning)
1 lines of code changed in 1 file:
- proper 'clean'
7 lines of code changed in 2 files:
- packed several unused files into .tgz
0 lines of code changed in 14 files:
*** empty log message ***
4 lines of code changed in 1 file:
fixed and reformatted dependencies (using fix_depends.pl)
25 lines of code changed in 1 file:
const fix
3 lines of code changed in 1 file:
- updated dependencies for all Makefiles
- rewrote dependency generation code. Only real changes
propagate into Makefiles - so it does no longer hurt to
call 'make depends' in ARB directory!
30 lines of code changed in 1 file:
*** empty log message ***
38 lines of code changed in 1 file:
makefile dependency generation fixed for GDE
97 lines of code changed in 1 file:
Most changes are made due to activating more warnings for the c++ compiler (linux)
40 lines of code changed in 1 file:
*** empty log message ***
126 lines of code changed in 1 file:
treepuzzle
797 lines of code changed in 18 files: