Directory lib/pictures/

Directory Created:
2000-11-23 11:41
Total Files:
103
Deleted Files:
45
Lines of Code:
3735

[root]/lib/pictures
            Folder removed from repo PARS (0 files, 0 lines)
            directory in repo awt (19 files, 599 lines)
            directory in repo awtc (2 files, 47 lines)
            directory in repo consensus (2 files, 368 lines)
            directory in repo cpro (2 files, 72 lines)
            Folder removed from repo demo (0 files, 0 lines)
            directory in repo edit4 (17 files, 839 lines)
            Folder removed from repo etc (0 files, 0 lines)
            directory in repo faligner (3 files, 139 lines)
            Folder removed from repo findcorr (0 files, 0 lines)
            directory in repo merge (12 files, 473 lines)
            directory in repo pars (3 files, 184 lines)
            directory in repo phylo (3 files, 67 lines)
            directory in repo query (5 files, 133 lines)
            Folder removed from repo seer (0 files, 0 lines)
            Folder removed from repo unused (0 files, 0 lines)
                Folder removed from repo demo (0 files, 0 lines)
                Folder removed from repo findcorr (0 files, 0 lines)
            directory in repo window (1 files, 24 lines)

Lines of Code

lib/pictures/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 557 (100.0%) 15155 (100.0%) 27.2
westram 417 (74.9%) 8661 (57.1%) 20.7
yadhu 50 (9.0%) 3281 (21.6%) 65.6
oldcode 68 (12.2%) 2685 (17.7%) 39.4
huberj 6 (1.1%) 220 (1.5%) 36.6
baderk 7 (1.3%) 132 (0.9%) 18.8
foerster 3 (0.5%) 128 (0.8%) 42.6
richter 2 (0.4%) 26 (0.2%) 13.0
epruesse 1 (0.2%) 14 (0.1%) 14.0
spanfeln 3 (0.5%) 8 (0.1%) 2.6

Most Recent Commits

westram 2023-09-13 18:33 Rev.: 19489


* reintegrates 'macros' into 'trunk'
* implements #856
* adds: log:branches/macros@19482:19488

25 lines of code changed in 2 files:

  • lib/pictures: macro_interruption.fig (new 19), macro_select.fig (+6 -5)
westram 2023-06-25 16:30 Rev.: 19407


* reintegrates 'ali' into 'trunk'
- use bond settings from EDIT4 in SECEDIT
- fix refresh logic
- refactor underlying code
* adds: log:branches/ali@19393:19406

6 lines of code changed in 1 file:

  • lib/pictures: sec_bonddef.fig (+6 -7)
westram 2022-03-01 15:39 Rev.: 18940


* reorder buttons
- new 'save' button at pos2 (too often clicked it by accident).
- use only 1 label for all buttons.
- use fixed button distance.

1 lines of code changed in 1 file:

  • lib/pictures: message.fig (+1 -4)
westram 2022-02-28 14:48 Rev.: 18935


* 'save' button now also saves content of message box to ~/arb-message-box.txt
* fix buttons in message box (+size, better pos).

2 lines of code changed in 1 file:

  • lib/pictures: message.fig (+2 -2)
westram 2022-02-28 14:46 Rev.: 18934


* add button to save properties
- allows to change default message box size + position
* cosmetic:
- separate code generating message box and progress bar.
- rename progress bar window.
- condense buttons.

3 lines of code changed in 1 file:

  • lib/pictures: message.fig (+3 -2)
westram 2021-12-20 18:44 Rev.: 18883


* reintegrates 'nds' into 'trunk'
- fixes #841
* adds: log:branches/nds@18843:18882

24 lines of code changed in 1 file:

  • lib/pictures: tree_export.fig (+24 -19)
westram 2021-10-08 16:07 Rev.: 18760


* change layout of 'Color Translation Table' properties window (make space for HELP button).
* add help button (fixes #326)
* change documentation of 'Define Color Translations'.

7 lines of code changed in 1 file:

  • lib/pictures: probeSaiColors.fig (+7 -6)
westram 2021-09-02 09:46 Rev.: 18697


* full update from child 'stable' into 'trunk'
- merge changes done to arb-7.0 release candidate
* adds: log:branches/stable@18690:18695

14 lines of code changed in 1 file:

  • lib/pictures: arb_intro.fig (+14 -17)
westram 2020-11-10 17:24 Rev.: 18634


* reintegrates 'root' into 'trunk'
- implements #449
* adds: log:branches/root@18451:18633

25 lines of code changed in 1 file:

  • lib/pictures: syncroot.fig (new 25)
westram 2020-05-14 19:21 Rev.: 18463


* reintegrates 'top' into 'trunk'
* adds: log:branches/top@18453:18462

25 lines of code changed in 1 file:

  • lib/pictures: ad_ext.fig (+25 -22)
westram 2020-02-21 14:07 Rev.: 18311


* reintegrates 'saicalc' into 'trunk'
- implements #730
* adds: log:branches/saicalc@18141:18310

129 lines of code changed in 5 files:

  • lib/pictures: saiaci.fig (new 18), saicalc.fig (new 37), saichain.fig (new 34), saimatrix.fig (new 24), saitrans.fig (new 16)
westram 2019-10-28 18:23 Rev.: 18186


* reintegrates 'fts' into 'trunk'
* adds: log:branches/fts@18177:18185

12 lines of code changed in 1 file:

  • lib/pictures: fts_ruledef.fig (+12 -12)
westram 2019-10-10 19:16 Rev.: 18168


* full update from child 'fix' into 'trunk'
* adds: log:branches/fix@18159:18167

1970 lines of code changed in 96 files:

  • lib/pictures: RNA3D_ChangeMolecule.fig (+1 -180), RNA3D_DisplayBases.fig (+31 -224), RNA3D_DisplayHelices.fig (+23 -208), RNA3D_DisplayOptions.fig (+21 -214), RNA3D_SeqMapping.fig (+41 -234), ad_align.fig (+17 -17), ad_branch.fig (+26 -32), ad_cons_tree.fig (+8 -8), ad_conv.fig (+5 -5), ad_delof.fig (+5 -5), ad_ext.fig (+12 -12), ad_ext_group.fig (+5 -5), ad_fcrea.fig (+15 -8), ad_gen_create.fig (+28 -36), ad_kreo.fig (+12 -16), ad_one_tree.fig (+1 -1), ad_query.fig (+38 -56), ad_selManNam.fig (+5 -5), ad_spec.fig (+9 -9), ad_spec_nn.fig (+23 -23), ad_spec_nnm.fig (+32 -34), ad_tree.fig (+26 -28), arb_intro.fig (+35 -49), calltexe.fig (+23 -15), chimera_check.fig (+28 -30), compare_taxonomy.fig (+12 -12), compare_topo.fig (+13 -21), concatenate.fig (+11 -11), dbbrowser.fig (+20 -22), di_cancel.fig (+30 -27), di_clusters.fig (+19 -19), di_ge_ma.fig (+54 -56), displayField.fig (+6 -185), ed_al_ex.fig (+29 -22), ed_al_sp.fig (+86 -81), ed_key.fig (+15 -23), fileselect.fig (+8 -8), fts_ruledef.fig (+23 -23), fts_select.fig (+12 -14), gde3item.fig (+24 -24), gdeitem.fig (+23 -25), gdeitem_simple.fig (+9 -13), gen_options.fig (+37 -59), group_search.fig (+65 -67), group_trees.fig (+5 -5), help.fig (+6 -6), insdel.fig (+4 -4), insdel_sai.fig (+16 -16), item_shader_cfg.fig (+30 -38), iupac.fig (+25 -25), join_species.fig (+6 -6), load_box.fig (+15 -17), macro_select.fig (+19 -23), mark_configs.fig (+6 -6), merge_species.fig (+11 -15), message.fig (+9 -11), move_groups.fig (+44 -56), mp_results.fig (+25 -29), multiprobe.fig (+38 -46), nt_selection.fig (+23 -27), nt_sort.fig (+14 -18), optimize.fig (+4 -4), pd_admin.fig (+16 -16), pd_main.fig (+37 -39), pd_match.fig (+35 -37), pd_match_iupac.fig (+15 -19), pd_match_probe_collection.fig (+53 -57), pd_match_with_specificity.fig (+19 -21), pd_reslt.fig (+1 -1), pd_spec.fig (+23 -23), pm_spec.fig (+39 -43), prd_main.fig (+54 -72), probeSaiColors.fig (+26 -28), proteinViewer.fig (+97 -137), realign_dna.fig (+10 -10), saiColorRange.fig (+26 -30), save_as.fig (+20 -22), sec_bonddef.fig (+1 -1), sec_display.fig (+11 -11), sec_imexport.fig (+32 -25), sel_box.fig (+7 -7), sel_box_nds.fig (+9 -9), sel_box_tree.fig (+9 -9), sel_box_user.fig (+11 -11), select_simple.fig (+1 -1), seq_quality.fig (+36 -217), sl_l_box.fig (+7 -7), sl_s_box.fig (+8 -8), stat_main.fig (+17 -10), status.fig (+10 -12), submiss.fig (+13 -13), syncscroll.fig (+5 -5), trackali.fig (+6 -6), transpro.fig (+11 -11), tree_export.fig (+17 -21), visualizeSAI.fig (+22 -205)
westram 2019-09-17 15:46 Rev.: 18092


* full update from child 'fts' into 'trunk'
- implements #562
* adds:
- [18091/branches/fts]
- log:branches/gui@17754:17924,17926:18090

79 lines of code changed in 2 files:

  • lib/pictures: fts_ruledef.fig (new 46), fts_select.fig (new 33)
westram 2018-10-31 10:52 Rev.: 17593


* reintegrates 'fix' into 'trunk'
- performs #798
* adds genetic code tables (24-31)
* adds combined amino acid J (I or L)
* improved translate and/or realign
- handle optional start-/stop-codons
- improve recognition of nuc-triples containing IUPAC-codes
* error messages now always list EMBL table numbers
* adds:
- log:branches/fix@17480:17485,17491:17492,17494:17507,17509:17528,17534:17592
- log:branches/optional@17481:17568

1 lines of code changed in 1 file:

  • lib/pictures: iupac.fig (+1 -1)
westram 2018-09-03 14:02 Rev.: 17350


* GUI cosmetic

7 lines of code changed in 1 file:

  • lib/pictures: move_groups.fig (+7 -5)
westram 2018-08-30 17:24 Rev.: 17342


* reintegrates 'group' into 'trunk'
- implements #780
* adds: log:branches/group@17162:17190,17261:17341

101 lines of code changed in 3 files:

  • lib/pictures: ad_two_trees.fig (del), compare_topo.fig (new 32), move_groups.fig (new 69)
westram 2018-07-06 16:02 Rev.: 17160


* reintegrates 'group' into 'trunk'
- misc. cleanup:
* group related functions now all accessible via menu of 1st ntree window
* DRY selection of 2 trees
* warn if annotated tree isnt visible
* fix mnemonics
* fix error handling (compare taxonomy)
* unittest comments added to tree remarks
* names
* adds: log:branches/group@17139:17159

24 lines of code changed in 2 files:

  • lib/pictures: ad_tree.fig (+13 -15), compare_taxonomy.fig (+11 -7)
westram 2017-10-27 19:04 Rev.: 16576


* painful merge from 'alilink' into 'trunk'
- attempt to eliminate existing conflicts by merging log:branches/alilink@12782,12786:12787 (=creation of conflicting files)
- also merged back already resolved conflicts (done in alilink)
- a dozen of manual merges :-(
* adds: log:branches/alilink@12782,12786:12787,13999,14004

31 lines of code changed in 2 files:

  • lib/pictures: realign_dna.fig (new 31), transdna.fig (del)
westram 2017-10-08 15:54 Rev.: 16508


* reintegrates 'macros' into 'trunk'
- introduce generic input prompt (related #179)
- use it instead of locally generated windows:
* species (rename + create)
* alignment (rename, copy + create)
* experiments (rename, copy + create)
* genes (rename, copy + extract)
* mergetool (rename SAI + configs)
* SAIviz color translation (copy + create)
- fixed bugs in mergetool ([16503],[16504])
* adds: log:branches/macros@16484:16507

0 lines of code changed in 1 file:

  • lib/pictures: ad_al_si.fig (del)
westram 2017-09-19 14:40 Rev.: 16391


* full update from child 'aci' into 'trunk'
- allow to view console from inside ARB
- slightly tweaked ACI trace
* adds: log:branches/aci@16386:16390

6 lines of code changed in 1 file:

  • lib/pictures: pd_admin.fig (+6 -4)
westram 2017-09-02 12:54 Rev.: 16259


* show build date in intro window

43 lines of code changed in 1 file:

  • lib/pictures: arb_intro.fig (+43 -35)
westram 2017-06-02 11:17 Rev.: 15982


* full update from child 'fix' into 'trunk'
- fixes #478
* adds: log:branches/fix@15976:15981

16 lines of code changed in 1 file:

  • lib/pictures: ad_spec.fig (+16 -15)
westram 2017-05-21 17:59 Rev.: 15966


* reintegrates 'group' into 'trunk'
- implements #652 (group search)
* adds: log:branches/group@15733:15740,15743:15748,15750:15752,15754,15756,15758:15777,15781:15793,15796,15798:15806,15808:15817,15819:15965

106 lines of code changed in 2 files:

  • lib/pictures: group_search.fig (new 83), group_trees.fig (new 23)
westram 2016-10-15 11:53 Rev.: 15340


* reintegrates 'sync' into 'trunk'
- implements #683
* adds: log:branches/sync@15291,15301:15312,15315:15318,15320:15329,15331:15339

20 lines of code changed in 1 file:

  • lib/pictures: syncscroll.fig (new 20)
westram 2016-07-14 15:15 Rev.: 15054


* reintegrates 'color' into 'trunk'
- implements #443 (+parts of #444)
* adds: log:branches/color@14920:14921,14923:14928,14930:14939,14941:14951,14954:14956,14958:14959,14961:14964,14968,14970:14981,14985,14988,14990:14992,14994:14999,15001:15004,15007,15009,15012:15026,15028:15035,15037:15039,15041:15053

57 lines of code changed in 1 file:

  • lib/pictures: item_shader_cfg.fig (new 57)
westram 2016-04-29 18:02 Rev.: 14786


* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: log:branches/gde@14670:14675,14682:14785

96 lines of code changed in 7 files:

  • lib/pictures: ad_conv.fig (+8 -8), ad_spec_nnm.fig (+10 -10), chimera_check.fig (+14 -12), compare_taxonomy.fig (+18 -24), join_species.fig (+16 -19), merge_species.fig (+15 -11), nt_sort.fig (+15 -16)
westram 2016-04-15 10:22 Rev.: 14729


* remove obsolete probe-group-interface
- also eliminates one unwanted selection-list-callback

0 lines of code changed in 1 file:

  • lib/pictures: pg_select.fig (del)
westram 2016-03-15 14:53 Rev.: 14696


* add missing 'help' label to xfig (fixes #693)
* minor layout fixes

16 lines of code changed in 1 file:

  • lib/pictures: sel_box_tree.fig (+16 -16)
westram 2015-12-16 16:13 Rev.: 14622


* reintegrates 'ui' into 'trunk'
- implements #656
- adds instant update for
* next neighbour search
* branch analysis (mark functions)
* arb-phylo (filter setup)
* adds: log:branches/ui@14588:14621

68 lines of code changed in 3 files:

  • lib/pictures: ad_branch.fig (+30 -21), ad_spec_nn.fig (+21 -33), ad_spec_nnm.fig (+17 -19)
westram 2015-11-27 20:31 Rev.: 14556


* reintegrates 'dbsave' into 'trunk'
- implements #665
* adds: log:branches/dbsave@14521:14555

21 lines of code changed in 2 files:

  • lib/pictures: save_as.fig (+21 -20), sel_box_user3.fig (del)
westram 2015-11-11 10:42 Rev.: 14488


* remove duplicate CLOSE/CANCEL buttons (they only suggest window is modal, while it isnt)

83 lines of code changed in 5 files:

  • lib/pictures: sel_box.fig (+9 -11), sel_box_nds.fig (+20 -22), sel_box_tree.fig (+14 -17), sel_box_user3.fig (+23 -25), tree_export.fig (+17 -19)
westram 2015-09-04 12:42 Rev.: 14259


* belongs to [14258]

15 lines of code changed in 1 file:

  • lib/pictures: help.fig (+15 -28)
westram 2015-09-02 17:31 Rev.: 14256


* reintegrates 'config' into 'trunk' (implements #607)
* adds: log:branches/config@14199:14255

26 lines of code changed in 1 file:

  • lib/pictures: nt_selection.fig (+26 -16)
westram 2015-08-07 11:46 Rev.: 14145


* add scalers to SECEDIT display options

17 lines of code changed in 1 file:

  • lib/pictures: sec_display.fig (+17 -19)
westram 2015-08-01 10:43 Rev.: 14123


* merge [14030] + [14032] from 'markers' into 'trunk'

78 lines of code changed in 2 files:

  • lib/pictures: iupac.fig (new 60), pd_match_iupac.fig (+18 -12)
westram 2015-07-31 16:33 Rev.: 14120


* remove now unused fig (also from [1463])

0 lines of code changed in 1 file:

  • lib/pictures: conservProfile2Gnuplot.fig (del)
westram 2015-07-28 16:42 Rev.: 14093


* SAI/PROBE match
- 'Select display field' window
* document
* fix layout
* fix crash when selecting 'no field'
- link other 'Properties' menu entries to existing helpfiles

15 lines of code changed in 1 file:

  • lib/pictures: displayField.fig (+15 -17)
westram 2015-07-28 14:52 Rev.: 14091


* RNA3D
- help-link buttons in main window
- remove unfinished help-window (replace by standard help) + remove now unused resources
- create stub for 'Change molecule' (23s only, undocumented and probably broken)

0 lines of code changed in 1 file:

  • lib/pictures: RNA3D_Help.fig (del)
westram 2015-07-28 12:31 Rev.: 14089


* merge 2 genemap property windows
* document genemap properties, jump, display types

78 lines of code changed in 3 files:

  • lib/pictures: gen_options.fig (new 78), gene_layout.fig (del), gene_options.fig (del)

(242 more)

Generated by StatSVN 0.7.0