[root]/lib/pictures
PARS
(0 files, 0 lines)
awt
(19 files, 599 lines)
awtc
(2 files, 47 lines)
consensus
(2 files, 368 lines)
cpro
(2 files, 72 lines)
demo
(0 files, 0 lines)
edit4
(17 files, 839 lines)
etc
(0 files, 0 lines)
faligner
(3 files, 139 lines)
findcorr
(0 files, 0 lines)
merge
(12 files, 473 lines)
pars
(3 files, 184 lines)
phylo
(3 files, 67 lines)
query
(5 files, 133 lines)
seer
(0 files, 0 lines)
unused
(0 files, 0 lines)
demo
(0 files, 0 lines)
findcorr
(0 files, 0 lines)
window
(1 files, 24 lines)
Author | Changes | Lines of Code | Lines per Change |
---|---|---|---|
Totals | 557 (100.0%) | 15155 (100.0%) | 27.2 |
westram | 417 (74.9%) | 8661 (57.1%) | 20.7 |
yadhu | 50 (9.0%) | 3281 (21.6%) | 65.6 |
oldcode | 68 (12.2%) | 2685 (17.7%) | 39.4 |
huberj | 6 (1.1%) | 220 (1.5%) | 36.6 |
baderk | 7 (1.3%) | 132 (0.9%) | 18.8 |
foerster | 3 (0.5%) | 128 (0.8%) | 42.6 |
richter | 2 (0.4%) | 26 (0.2%) | 13.0 |
epruesse | 1 (0.2%) | 14 (0.1%) | 14.0 |
spanfeln | 3 (0.5%) | 8 (0.1%) | 2.6 |
* reintegrates 'macros' into 'trunk'
* implements #856
* adds: log:branches/macros@19482:19488
25 lines of code changed in 2 files:
* reintegrates 'ali' into 'trunk'
- use bond settings from EDIT4 in SECEDIT
- fix refresh logic
- refactor underlying code
* adds: log:branches/ali@19393:19406
6 lines of code changed in 1 file:
* reorder buttons
- new 'save' button at pos2 (too often clicked it by accident).
- use only 1 label for all buttons.
- use fixed button distance.
1 lines of code changed in 1 file:
* 'save' button now also saves content of message box to ~/arb-message-box.txt
* fix buttons in message box (+size, better pos).
2 lines of code changed in 1 file:
* add button to save properties
- allows to change default message box size + position
* cosmetic:
- separate code generating message box and progress bar.
- rename progress bar window.
- condense buttons.
3 lines of code changed in 1 file:
* reintegrates 'nds' into 'trunk'
- fixes #841
* adds: log:branches/nds@18843:18882
24 lines of code changed in 1 file:
* change layout of 'Color Translation Table' properties window (make space for HELP button).
* add help button (fixes #326)
* change documentation of 'Define Color Translations'.
7 lines of code changed in 1 file:
* full update from child 'stable' into 'trunk'
- merge changes done to arb-7.0 release candidate
* adds: log:branches/stable@18690:18695
14 lines of code changed in 1 file:
* reintegrates 'root' into 'trunk'
- implements #449
* adds: log:branches/root@18451:18633
25 lines of code changed in 1 file:
* reintegrates 'top' into 'trunk'
* adds: log:branches/top@18453:18462
25 lines of code changed in 1 file:
* reintegrates 'saicalc' into 'trunk'
- implements #730
* adds: log:branches/saicalc@18141:18310
129 lines of code changed in 5 files:
* reintegrates 'fts' into 'trunk'
* adds: log:branches/fts@18177:18185
12 lines of code changed in 1 file:
* full update from child 'fix' into 'trunk'
* adds: log:branches/fix@18159:18167
1970 lines of code changed in 96 files:
* full update from child 'fts' into 'trunk'
- implements #562
* adds:
- [18091/branches/fts]
- log:branches/gui@17754:17924,17926:18090
79 lines of code changed in 2 files:
* reintegrates 'fix' into 'trunk'
- performs #798
* adds genetic code tables (24-31)
* adds combined amino acid J (I or L)
* improved translate and/or realign
- handle optional start-/stop-codons
- improve recognition of nuc-triples containing IUPAC-codes
* error messages now always list EMBL table numbers
* adds:
- log:branches/fix@17480:17485,17491:17492,17494:17507,17509:17528,17534:17592
- log:branches/optional@17481:17568
1 lines of code changed in 1 file:
* GUI cosmetic
7 lines of code changed in 1 file:
* reintegrates 'group' into 'trunk'
- implements #780
* adds: log:branches/group@17162:17190,17261:17341
101 lines of code changed in 3 files:
* reintegrates 'group' into 'trunk'
- misc. cleanup:
* group related functions now all accessible via menu of 1st ntree window
* DRY selection of 2 trees
* warn if annotated tree isnt visible
* fix mnemonics
* fix error handling (compare taxonomy)
* unittest comments added to tree remarks
* names
* adds: log:branches/group@17139:17159
24 lines of code changed in 2 files:
* painful merge from 'alilink' into 'trunk'
- attempt to eliminate existing conflicts by merging log:branches/alilink@12782,12786:12787 (=creation of conflicting files)
- also merged back already resolved conflicts (done in alilink)
- a dozen of manual merges :-(
* adds: log:branches/alilink@12782,12786:12787,13999,14004
31 lines of code changed in 2 files:
* reintegrates 'macros' into 'trunk'
- introduce generic input prompt (related #179)
- use it instead of locally generated windows:
* species (rename + create)
* alignment (rename, copy + create)
* experiments (rename, copy + create)
* genes (rename, copy + extract)
* mergetool (rename SAI + configs)
* SAIviz color translation (copy + create)
- fixed bugs in mergetool ([16503],[16504])
* adds: log:branches/macros@16484:16507
0 lines of code changed in 1 file:
* full update from child 'aci' into 'trunk'
- allow to view console from inside ARB
- slightly tweaked ACI trace
* adds: log:branches/aci@16386:16390
6 lines of code changed in 1 file:
* show build date in intro window
43 lines of code changed in 1 file:
* full update from child 'fix' into 'trunk'
- fixes #478
* adds: log:branches/fix@15976:15981
16 lines of code changed in 1 file:
* reintegrates 'group' into 'trunk'
- implements #652 (group search)
* adds: log:branches/group@15733:15740,15743:15748,15750:15752,15754,15756,15758:15777,15781:15793,15796,15798:15806,15808:15817,15819:15965
106 lines of code changed in 2 files:
* reintegrates 'sync' into 'trunk'
- implements #683
* adds: log:branches/sync@15291,15301:15312,15315:15318,15320:15329,15331:15339
20 lines of code changed in 1 file:
* reintegrates 'color' into 'trunk'
- implements #443 (+parts of #444)
* adds: log:branches/color@14920:14921,14923:14928,14930:14939,14941:14951,14954:14956,14958:14959,14961:14964,14968,14970:14981,14985,14988,14990:14992,14994:14999,15001:15004,15007,15009,15012:15026,15028:15035,15037:15039,15041:15053
57 lines of code changed in 1 file:
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: log:branches/gde@14670:14675,14682:14785
96 lines of code changed in 7 files:
* remove obsolete probe-group-interface
- also eliminates one unwanted selection-list-callback
0 lines of code changed in 1 file:
* add missing 'help' label to xfig (fixes #693)
* minor layout fixes
16 lines of code changed in 1 file:
* reintegrates 'ui' into 'trunk'
- implements #656
- adds instant update for
* next neighbour search
* branch analysis (mark functions)
* arb-phylo (filter setup)
* adds: log:branches/ui@14588:14621
68 lines of code changed in 3 files:
* reintegrates 'dbsave' into 'trunk'
- implements #665
* adds: log:branches/dbsave@14521:14555
21 lines of code changed in 2 files:
* remove duplicate CLOSE/CANCEL buttons (they only suggest window is modal, while it isnt)
83 lines of code changed in 5 files:
* belongs to [14258]
15 lines of code changed in 1 file:
* reintegrates 'config' into 'trunk' (implements #607)
* adds: log:branches/config@14199:14255
26 lines of code changed in 1 file:
* add scalers to SECEDIT display options
17 lines of code changed in 1 file:
* merge [14030] + [14032] from 'markers' into 'trunk'
78 lines of code changed in 2 files:
* remove now unused fig (also from [1463])
0 lines of code changed in 1 file:
* SAI/PROBE match
- 'Select display field' window
* document
* fix layout
* fix crash when selecting 'no field'
- link other 'Properties' menu entries to existing helpfiles
15 lines of code changed in 1 file:
* RNA3D
- help-link buttons in main window
- remove unfinished help-window (replace by standard help) + remove now unused resources
- create stub for 'Change molecule' (23s only, undocumented and probably broken)
0 lines of code changed in 1 file:
* merge 2 genemap property windows
* document genemap properties, jump, display types
78 lines of code changed in 3 files:
(242 more)