Directory DIST/

Directory Created:
2000-11-23 10:41
Total Files:
20
Deleted Files:
18
Lines of Code:
7371

[root]/DIST

Lines of Code

DIST/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 741 (100.0%) 20203 (100.0%) 27.2
westram 719 (97.0%) 17204 (85.2%) 23.9
oldcode 16 (2.2%) 2748 (13.6%) 171.7
meierh 1 (0.1%) 242 (1.2%) 242.0
epruesse 2 (0.3%) 7 (0.0%) 3.5
boehnel 2 (0.3%) 2 (0.0%) 1.0
baderk 1 (0.1%) 0 (0.0%) 0.0

Most Recent Commits

westram 2018-10-17 10:00 Rev.: 17478


* reintegrates 'svalues' into 'trunk'
- implements #614
* adds: log:branches/svalues@17357:17419,17428:17464,17469,17471:17477

4 lines of code changed in 1 file:

  • DIST: DI_matr.cxx (+4 -1)
westram 2018-07-23 15:52 Rev.: 17262


* partial merge from 'group' into 'trunk'
- fixes to arb_progress
* adds:
- log:branches/group@17191:17218,17220:17260
- log:branches/progress@17195:17216,17218:17259

4 lines of code changed in 2 files:

  • DIST: DI_clustertree.cxx (+1 -1), DI_matr.cxx (+3 -3)
westram 2018-07-13 12:12 Rev.: 17192


* DRY

5 lines of code changed in 1 file:

  • DIST: DI_protdist.cxx (+5 -5)
westram 2018-07-13 12:05 Rev.: 17191


* use {{{hypot}}}

23 lines of code changed in 1 file:

  • DIST: DI_protdist.cxx (+23 -17)
westram 2018-07-10 15:48 Rev.: 17178


* reintegrates 'gcc' into 'trunk'
- complete arb port to gcc 8.1
- fixes NDEBUG-related issues (not handled by [16986])
* adds: log:branches/gcc@17164:17177

11 lines of code changed in 2 files:

  • DIST: DI_matr.cxx (+3 -1), DI_protdist.cxx (+8 -8)
westram 2018-06-15 12:08 Rev.: 17110


* reintegrates 'tree' into 'trunk'
- implements #735
* adds:
- log:branches/addtest@17040:17044
- log:branches/tree@16921:17109

25 lines of code changed in 6 files:

  • DIST: DI_clusters.cxx (+10 -8), DI_clustertree.cxx (+8 -8), DI_compress_matrix.cxx (+1 -1), DI_foundclusters.cxx (+3 -3), DI_matr.cxx (+2 -2), di_matr.hxx (+1 -1)
westram 2018-05-04 17:06 Rev.: 16986


* reintegrates 'gcc' into 'trunk'
- ports arb to gcc 8.1 (fixing warnings)
* adds: log:branches/gcc@16965:16985

Update: continued by [17178]

3 lines of code changed in 1 file:

  • DIST: di_protdist.hxx (+3 -3)
westram 2018-05-02 10:32 Rev.: 16961


* partial merge from 'fix' into 'trunk'
- refactored {{{AW_device}}} text output
* reduces calls to strlen (using {{{SizedCstr}}})
* eliminated/modernized several parameters/functions (esp. in {{{TextOverlayCallback}}}s)
* adds: log:branches/fix@16939:16960

1 lines of code changed in 1 file:

  • DIST: Makefile (+1)
westram 2018-04-30 17:27 Rev.: 16936


* reintegrates 'cleanup' into 'trunk'
- performs #762 (shrink 3.7 k)
* adds: log:branches/cleanup@16924:16935

0 lines of code changed in 1 file:

  • DIST: DI_matr.cxx (-2)
westram 2018-04-11 15:48 Rev.: 16880


* reintegrates 'multicore' into 'trunk'
- derive sequence classes able to be combined from new class {{{AP_combinableSeq}}}
* elim dummy functions from rest of hierarchy
- implements non-writing combine for add-species (speedup: 25-35%)
- introduce type {{{Mutations}}} => uses long everywhere (before mostly, but not always used float)
- allows use of {{{future}}}s
* nucleotide combine is able to calculate async (disabled via define atm -> {{{NEVER_COMBINE_ASYNC}}}; needs more work on calling algorithm)
* adds: log:branches/multicore@16769:16879

10 lines of code changed in 2 files:

  • DIST: DI_clustertree.cxx (+9 -8), di_clustertree.hxx (+1)
westram 2017-11-28 18:22 Rev.: 16766


* reintegrates 'gcc' into 'trunk'
- mostly cosmetics changes
* adds: log:branches/gcc@16655,16741:16743,16752:16765

113 lines of code changed in 4 files:

  • DIST: DI_clusters.cxx (+1 -1), DI_matr.cxx (+1 -1), DI_protdist.cxx (+18 -27), DI_save_matr.cxx (+93 -95)
westram 2017-11-28 17:09 Rev.: 16763


* partial merge from 'gcc' into 'trunk'
- use {{{nullptr}}} in Cxx11 (with backward compatibility)
* adds: log:branches/gcc@16683:16740,16744:16746,16751

169 lines of code changed in 13 files:

  • DIST: DI_clusters.cxx (+17 -17), DI_clustertree.cxx (+10 -10), DI_compress_matrix.cxx (+7 -7), DI_foundclusters.cxx (+14 -14), DI_main.cxx (+1 -1), DI_matr.cxx (+65 -65), DI_protdist.cxx (+11 -11), DI_save_matr.cxx (+2 -2), DI_view_matrix.cxx (+17 -17), di_clustertree.hxx (+17 -17), di_foundclusters.hxx (+2 -2), di_matr.hxx (+4 -4), di_view_matrix.hxx (+2 -2)
westram 2017-11-28 11:32 Rev.: 16761


* remove set but unused variable (distance cancel chars not used in "auto-detect correction"; could be passed to auto-detector)

2 lines of code changed in 1 file:

  • DIST: DI_matr.cxx (+2 -2)
westram 2017-11-19 15:19 Rev.: 16683


* full update from child 'gcc' into 'trunk'
- more warning fixes
- fix bug in prettyprint
* adds: log:branches/gcc@16668:16682

2 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (+2 -1)
westram 2017-01-04 17:06 Rev.: 15513


* reintegrates 'warnings' into 'trunk'
- activate additional warnings (gcc 5.x++)
- Cxx11-forward final (classes+methods)
- fix tag problems caused by using preprocessor
* adds: log:branches/warnings@15486:15489,15491:15501,15506:15512

4 lines of code changed in 2 files:

  • DIST: DI_clusters.cxx (+2 -2), di_clustertree.hxx (+2 -2)
westram 2016-08-30 13:26 Rev.: 15256


* replace redundant data {{{AW_font_limits::height}}} with {{{get_height()}}}

2 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (+2 -2)
westram 2016-08-30 11:30 Rev.: 15254


* depends for [15253]

1 lines of code changed in 1 file:

  • DIST: Makefile (+1)
westram 2016-08-17 19:39 Rev.: 15198


* remove {{{virtual}}} if {{{OVERRIDE}}} is present
- OVERRIDE implies 'implicit virtual' (if code compiles as C++11 <- tested on build server!)

2 lines of code changed in 2 files:

  • DIST: DI_clusters.cxx (+1 -1), di_clustertree.hxx (+1 -1)
westram 2016-08-11 10:05 Rev.: 15176


* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: log:branches/fixres@15127:15175

40 lines of code changed in 8 files:

  • DIST: DI_clusters.cxx (+2 -2), DI_compress_matrix.cxx (+4 -4), DI_foundclusters.cxx (+1 -1), DI_matr.cxx (+10 -11), DI_protdist.cxx (+11 -9), DI_save_matr.cxx (+1 -1), Makefile (+10), di_matr.hxx (+1 -1)
westram 2016-07-15 14:48 Rev.: 15064


* remove parameter {{{base_gc}}} from {{{AW_manage_GC}}} (always zero)

1 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (+1 -1)
westram 2016-07-14 14:15 Rev.: 15054


* reintegrates 'color' into 'trunk'
- implements #443 (+parts of #444)
* adds: log:branches/color@14920:14921,14923:14928,14930:14939,14941:14951,14954:14956,14958:14959,14961:14964,14968,14970:14981,14985,14988,14990:14992,14994:14999,15001:15004,15007,15009,15012:15026,15028:15035,15037:15039,15041:15053

0 lines of code changed in 1 file:

  • DIST: Makefile (-9)
westram 2016-07-14 13:45 Rev.: 15053


* merge most WINDOW patches from 'color' into 'trunk'
- color-ranges (completes implementation of #682)
* new types (cyclic, planar and spatial)
* can display as canvas-overlay
* setup in separate window
* allow external access via ID (query, activate)
* adds: log:branches/color@14984,14986:14987,14989,14993,15000,15005:15006,15008,15011,15036

2 lines of code changed in 1 file:

  • DIST: Makefile (+2)
westram 2016-06-15 12:35 Rev.: 14943


* merge 2 WINDOW-modifications from 'color' into 'trunk'
* adds: log:branches/color@14929,14940

0 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (-1)
westram 2016-05-12 08:58 Rev.: 14838


* no longer pseudo-hide gc-manager-object
- {{{aw_gc_manager}}} -> {{{AW_gc_manager}}}
- use pointers to {{{AW_gc_manager}}} instead of pointer-typedef

1 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (+1 -1)
westram 2016-01-29 08:35 Rev.: 14686


* change datatypes used in awar-access (only changed simple cases)

10 lines of code changed in 3 files:

  • DIST: DI_clusters.cxx (+5 -5), DI_matr.cxx (+2 -2), DI_view_matrix.cxx (+3 -3)
westram 2015-12-16 15:13 Rev.: 14622


* reintegrates 'ui' into 'trunk'
- implements #656
- adds instant update for
* next neighbour search
* branch analysis (mark functions)
* arb-phylo (filter setup)
* adds: log:branches/ui@14588:14621

80 lines of code changed in 4 files:

  • DIST: DI_matr.cxx (+2 -2), DI_view_matrix.cxx (+72 -89), Makefile (+1), di_view_matrix.hxx (+5 -2)
westram 2015-11-11 12:40 Rev.: 14490


* change callbacktype used to trigger refresh after GCs changed
- pass what has been changed (font,color only,use of color groups)
* added standard callback ({{{AWT_GC_changed_cb}}})
* {{{AWAR_COLOR_GROUPS_USE}}}
- remove client callback triggering refresh (installed by TREEDISP)
- add general callback calling {{{GcChangedCallback}}} passed to {{{AW_manage_GC}}}
- hide awar inside {{{AW_preset.cxx}}}
* effects:
- EDIT4 does refresh now when toggling use of color groups
- (several) canvases just do "expose" in case of color change (instead of "resize/zoom reset" which is needed for font changes)

18 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (+18 -5)
westram 2015-11-04 09:57 Rev.: 14453


* do not cast AW_POPDOWN

8 lines of code changed in 3 files:

  • DIST: DI_clusters.cxx (+2 -1), DI_matr.cxx (+5 -3), DI_view_matrix.cxx (+1 -1)
westram 2015-09-07 16:58 Rev.: 14269


* sync menu entry 'Frame settings' (and mark motif only where missing)
* merge some gtk-only application code into trunk (not compiled there)

3 lines of code changed in 1 file:

  • DIST: DI_matr.cxx (+3 -1)
westram 2015-08-26 12:26 Rev.: 14208


* dont use {{{calc_signed_digits}}} for unsigned input (warns since [14206])

2 lines of code changed in 1 file:

  • DIST: DI_foundclusters.cxx (+2 -2)
westram 2015-08-26 11:24 Rev.: 14203


- DRY digit calculation

3 lines of code changed in 1 file:

  • DIST: DI_foundclusters.cxx (+3 -14)
westram 2015-08-11 13:21 Rev.: 14148


* remove clicked line/text from AWT_graphic_event (replace by ptr to click device)
* retrieve clicked items later (in {{{best_click}}}); avoids copy

1 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (+1 -6)
westram 2015-07-17 15:18 Rev.: 14046


* use one help for all "Colors and fonts"

1 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (+1 -1)
westram 2015-07-08 09:12 Rev.: 13985


* DRY {{{charpLess}}} vs {{{ltstr}}} and {{{lessCCP}}}

1 lines of code changed in 1 file:

  • DIST: DI_matr.cxx (+1 -2)
westram 2015-06-12 18:38 Rev.: 13914


* renames only: FILLED -> SOLID, tipBoxSize -> TIP_BOX_SIZE

1 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (+1 -1)
westram 2015-06-11 16:21 Rev.: 13907


* use {{{AW::FillStyle}}} from clients

1 lines of code changed in 1 file:

  • DIST: DI_view_matrix.cxx (+1 -1)
westram 2015-04-30 11:31 Rev.: 13790


* fix conditional compilation of {{{findNode}}} and {{{setBranchlens}}}
* silence prototype warning

2 lines of code changed in 1 file:

  • DIST: DI_matr.cxx (+2)
westram 2015-04-28 16:40 Rev.: 13778


* replace init-by-memset for {{{DI_ENTRY}}}, {{{DI_MATRIX}}} + {{{di_protdist}}}

88 lines of code changed in 4 files:

  • DIST: DI_matr.cxx (+27 -15), DI_protdist.cxx (+56 -26), di_matr.hxx (+2 -2), di_protdist.hxx (+3 -2)
westram 2015-04-18 18:47 Rev.: 13752


* destroying {{{TreeNode}}}s from {{{TreeRoot}}} leads to pure virtual method call
- reason: class derived from {{{TreeRoot}}} already under deconstruction
- solution: delete from dtor of derived class. fixes #648

3 lines of code changed in 2 files:

  • DIST: DI_clusters.cxx (+2 -3), di_clustertree.hxx (+1 -1)
westram 2015-04-18 16:50 Rev.: 13750


* stuff/suppress some leaks in ARB_DIST

8 lines of code changed in 2 files:

  • DIST: DI_matr.cxx (+6 -5), DI_view_matrix.cxx (+2)

(320 more)

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