Directory AISC/

Directory Created:
2000-11-23 11:41
Total Files:
16
Deleted Files:
2
Lines of Code:
3904

[root]/AISC

Lines of Code

AISC/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 209 (100.0%) 9281 (100.0%) 44.4
westram 199 (95.2%) 6857 (73.9%) 34.4
oldcode 7 (3.3%) 2388 (25.7%) 341.1
meierh 1 (0.5%) 35 (0.4%) 35.0
baderk 2 (1.0%) 1 (0.0%) 0.5

Most Recent Commits

westram 2019-05-10 13:57 Rev.: 17877


* reintegrates 'gcc' into 'trunk'
* adds: log:branches/gcc@17850:17876

32 lines of code changed in 1 file:

  • AISC: aisc_parser.h (+32 -20)
westram 2019-03-04 15:22 Rev.: 17634


* reintegrates 'mix' into 'trunk'
* prepare arb for hybrid svn/git use (central svn + local git)
* adds: log:branches/mix@17631:17633

1 lines of code changed in 1 file:

  • AISC: .gitignore (new 1)
westram 2017-11-28 19:22 Rev.: 16766


* reintegrates 'gcc' into 'trunk'
- mostly cosmetics changes
* adds: log:branches/gcc@16655,16741:16743,16752:16765

1 lines of code changed in 1 file:

  • AISC: aisc.c (+1 -4)
westram 2017-11-28 18:09 Rev.: 16763


* partial merge from 'gcc' into 'trunk'
- use {{{nullptr}}} in Cxx11 (with backward compatibility)
* adds: log:branches/gcc@16683:16740,16744:16746,16751

130 lines of code changed in 13 files:

  • AISC: aisc.c (+9 -9), aisc_commands.c (+24 -21), aisc_def.h (+1 -1), aisc_eval.c (+3 -3), aisc_eval.h (+3 -3), aisc_inline.h (+4 -2), aisc_interpreter.h (+17 -17), aisc_location.h (+3 -3), aisc_mix.c (+15 -15), aisc_parser.c (+17 -17), aisc_parser.h (+1 -1), aisc_token.h (+20 -20), aisc_var_ref.c (+13 -13)
westram 2017-08-09 14:59 Rev.: 16223


* reintegrates 'cover' into 'trunk'
- fixes compilation with COVERAGE
* ARB perl module failed to load (since [13739])
* linking executables broken (apparently since [14038])
* adds: log:branches/cover@16213:16222

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2017-01-09 16:10 Rev.: 15529


* reintegrates 'warnings' into 'trunk'
- use gnu++14-standard for gcc>=6
- use gnu++0x-standard for gcc<4.7 (bugfix)
- defines many inlines as constexpr
* adds: log:branches/warnings@15515:15522,15525:15528

9 lines of code changed in 1 file:

  • AISC: aisc_inline.h (+9 -9)
westram 2017-01-07 14:55 Rev.: 15525


* partial merge from 'warnings' into 'trunk'
- fix dead code (merge error by [7413])
* adds: log:branches/warnings@15523:15524

2 lines of code changed in 3 files:

  • AISC: aisc.h (del), aisc_def.h (+1 -1), aisc_interpreter.h (+1 -1)
westram 2016-08-17 20:39 Rev.: 15198


* remove {{{virtual}}} if {{{OVERRIDE}}} is present
- OVERRIDE implies 'implicit virtual' (if code compiles as C++11 <- tested on build server!)

5 lines of code changed in 1 file:

  • AISC: aisc_commands.c (+5 -5)
westram 2016-08-11 11:05 Rev.: 15176


* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: log:branches/fixres@15127:15175

12 lines of code changed in 1 file:

  • AISC: aisc_interpreter.h (+12 -2)
westram 2015-05-01 11:09 Rev.: 13795


* improve hash quality
- avoid "left shift of negative value" reported by sanitizer (lost bits of hash key)
- ~~change hash size to prime~~ (reapplied by [15524])

3 lines of code changed in 2 files:

  • AISC: aisc.h (+1 -1), aisc_mix.c (+2 -2)
westram 2015-01-23 15:19 Rev.: 13443


* reintegrates 'vectorize' into 'trunk'
- adds vectorization check for gcc 4.9.x / NDEBUG compile
* adds:
- log:branches/vectorize@13428:13442

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2014-10-17 16:43 Rev.: 13077


* reintegrates 'sanitize' into 'trunk'
* adds:
- log:branches/sanitize@13023:13076

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2013-11-20 17:38 Rev.: 11176


* fixes compilation with COVERAGE!=0 (was broken by [10956])

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2013-10-31 16:40 Rev.: 11002


* 'class { public' -> struct

1 lines of code changed in 1 file:

  • AISC: aisc_commands.c (+1 -2)
westram 2013-10-31 15:10 Rev.: 10996


* use cflags before cxxflags

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2013-10-30 17:04 Rev.: 10975


* fixed wrong include variables (CC-CXX-mix). Harmless since includes do not differ atm

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2013-10-30 16:58 Rev.: 10974


* renamed include variables

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2013-10-29 13:55 Rev.: 10956


* made A_CC and A_CXX consistent
- A_CXX previously contained cxxflags
- cxxflags are now passed down and used separately

2 lines of code changed in 1 file:

  • AISC: Makefile (+2 -3)
westram 2013-10-29 13:23 Rev.: 10955


- renamed
* ACC -> A_CC
* CPP -> A_CXX (misleading atm, since it contains c++flags)

2 lines of code changed in 1 file:

  • AISC: Makefile (+2 -2)
westram 2013-10-29 12:43 Rev.: 10954


- document mechanism used by ARB to export variables to submakefiles
- document most important variables

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2013-10-28 20:09 Rev.: 10950


* fix cppcheck warnings
- renamed enum members hiding variables
- reintroduced suppressions removed in [10946]
- renamed function index()

63 lines of code changed in 4 files:

  • AISC: aisc_commands.c (+12 -10), aisc_interpreter.h (+2 -2), aisc_mix.c (+39 -39), aisc_parser.h (+10 -10)
westram 2013-10-28 18:39 Rev.: 10946


- remove outdated cppcheck-suppressions

0 lines of code changed in 1 file:

  • AISC: aisc_commands.c (-2)
westram 2013-06-13 14:31 Rev.: 10148


* makedepend changed behavior between 1.0.2 and 1.0.4
- 1.0.4 does generate impossible dependencies (see [10143] for an example)
- force correct behavior by defining SIMPLE_ARB_ASSERT on CLI (when invoking compiler and makedepend)

18 lines of code changed in 3 files:

  • AISC: Makefile (+14 -4), aisc.h (+2 -3), aisc_def.h (+2 -3)
westram 2013-06-04 15:20 Rev.: 10113


* changed dynamic value-initializations into default-initializations
- i believe/know they were used with ignorance of [http://stackoverflow.com/questions/620137/do-the-parentheses-after-the-type-name-make-a-difference-with-new?answertab=active#tab-top ctor-behavior].

1 lines of code changed in 1 file:

  • AISC: aisc_commands.c (+1 -1)
westram 2013-02-27 20:30 Rev.: 9620


- effects of [9619]; only shifts some spaces

1 lines of code changed in 1 file:

  • AISC: aisc_proto.h (+1 -1)
westram 2013-02-26 12:32 Rev.: 9600


* aisc_mkpt
- default is to generate ANSI headers now (options -A and -z are invalid now)
- added options to force K&R (not used)
- reordered help options
* fixed all calls using -A and/or -z
* no longer use K&R prototypes in SL/TREEDISP

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2013-02-13 13:24 Rev.: 9575


- effect of [9574] (comments only)

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2013-02-11 12:35 Rev.: 9533


* use explicit override
- rest

6 lines of code changed in 1 file:

  • AISC: aisc_commands.c (+6 -6)
westram 2013-02-09 13:52 Rev.: 9521


- updated depends for [9520]

6 lines of code changed in 1 file:

  • AISC: Makefile (+6)
westram 2013-02-09 12:16 Rev.: 9516


- reintegrated branch 'cxx11'

6 lines of code changed in 1 file:

  • AISC: Makefile (+6)
westram 2012-07-20 10:45 Rev.: 8823


* add realloc_unleaked() - does not leak if realloc fails (just sets ptr to NULL)
* AISC
- replaced problematic realloc's and throw if realloc fails
- add exception handling to main
- check Interpreter was instanciated before accessing it (crashed during early throw)
- cppcheck-suppress two acceptable leaks

28 lines of code changed in 3 files:

  • AISC: aisc.c (+11 -1), aisc_commands.c (+13 -7), aisc_interpreter.h (+4 -2)
westram 2012-05-25 10:31 Rev.: 8751


* guided by clang static checker:
- fix or at least comment many assigned but never used values

0 lines of code changed in 1 file:

  • AISC: aisc.c (-3)
westram 2012-04-19 09:13 Rev.: 8607


merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] [8142] [8143] [8144] [8222]
(this revives the reverted patches [8129] [8130] [8131] [8132]; see [8133])

* fixes
- some free/delete mismatches
- wrong definition of ORF objects (Level was no bit value)
- amino consensus (failed for columns only containing 'C')
* rename
- AA_sequence_term -> orf_term
- ED4_sequence_terminal_basic -> ED4_abstract_sequence_terminal
* cleaned up hierarchy dumps
* tweaked is_terminal()/to_terminal()

0 lines of code changed in 1 file:

  • AISC: aisc_interpreter.h (changed)
westram 2011-12-23 13:57 Rev.: 8324


- clang-fix: explicitely pass language type to compiler when .c is compiled as c++

1 lines of code changed in 1 file:

  • AISC: Makefile (+1 -1)
westram 2011-12-20 13:29 Rev.: 8309


* moved much code into static scope

(partly reverted by [8310])

1 lines of code changed in 1 file:

  • AISC: aisc.c (+1 -1)
westram 2011-08-08 01:01 Rev.: 7811


merge from dev [7748] [7749] [7750]
* comments (C->C++ style)
* fixed umlauts in TREEGEN

29 lines of code changed in 6 files:

  • AISC: aisc.c (+7 -7), aisc_commands.c (+7 -7), aisc_eval.c (+1 -1), aisc_eval.h (+1 -1), aisc_mix.c (+6 -6), aisc_var_ref.c (+7 -7)
westram 2011-06-16 23:23 Rev.: 7669


* merge from dev [7638] [7639] [7646] [7645] [7647] [7648] [7649] [7650] [7651] [7652]
- compatibility with cppcheck 1.49 (assert + ASSERT_RESULT)
- fixed (AWT and WINDOW)
* missing const attributes
* uninitialized/unused/wrong-scoped/useless variables
* alloc/free/delete mismatches
* use assertions instead of null-pointer-assignments
- removed
* AW_device_Xm fast/slow/fastflag
- new class AW_scalar
* can hold any AW_awar-value
- uses int32_t (AW_awar is based on GB_INT which is 32 bit)
* knows its type
* use in
- AW_option_struct / AW_toggle_struct (both classes were identical -> replaced them by new class AW_widget_value_pair)
- in AW_variable_update_struct (now !VarUpdateInfo)
- in AW_select_table_struct (now AW_selection_list_entry)

10 lines of code changed in 2 files:

  • AISC: aisc.c (+2), aisc_parser.h (+8 -7)
westram 2011-06-10 15:50 Rev.: 7623


- merge from dev [7450] [7452] [7456] [7457] [7458] [7459] [7460] [7461] [7464] [7465] [7466] [7467] [7468] [7469] [7482]
* tweaked compiler options
- activated -Weffc++
* postfilter warnings where Scott Meyers' advices are too general.
- base classes should not always have virtual destructors, since that renders tiny classes useless and
- members should not always be initialized via initialization list, since that often violates the DRY principle
* fix gcc's inability to detect that Noncopyable implements a private copy-ctor and op=
* this slows down complete ARB recompilation by ~5%
- added -Wold-style-cast (inactive)
- removed -Wno-non-template-friend added in [7447]
* postcompile.pl
- added option --original to show unmodified compiler output
* declared op= for classes which had a copy-ctor
* moved op= macros to arbtools.h
* derived classes containing pointers from Noncopyable (use Noncopyable virtually) or
* made them copyable if needed (awt_mask_item, KnownDB, Code, AWT_registered_itemtype, GEN_gene, !PosGene, !PartialSequence, !PlugIn, Range, Convaln_exception)
* other related changes
- user mask destruction working now

49 lines of code changed in 10 files:

  • AISC: Makefile (+3), aisc.c (+2 -2), aisc_commands.c (+2 -2), aisc_eval.h (+1 -1), aisc_interpreter.h (+6 -6), aisc_mix.c (+9 -10), aisc_parser.c (+2 -2), aisc_parser.h (+17 -2), aisc_token.h (+6 -3), aisc_var_ref.c (+1 -1)
westram 2011-04-14 10:54 Rev.: 7415


merged from dev [7395] [7396] [7397] [7398] [7399] [7400] [7401] [7402] [7403] [7404] [7405]

* server/client interface
- changed invalid casts (now casts are done between classes derived from dll<XXX>)
- re-activated 'unused' warnings (deactivated since [566])
- removed unused functions/variables
- removed 'extern "C"'-voodoo
- when creating two objects containing a DESTROY callback (like PT_local), AISC servers now warn and automatically destroy the 1st created object (which leaked) and then create the 2nd
* fixed multiple creation of PT_local from PT_FamilyFinder
* print ioerror when saving nameserver db fails
* AISC interpreter
- fixed array overflow in command table
- detect "endless" recursive evaluation
- fixed RUIs occurred while scanning backwards
- fixed leak
- GOSUB/CALL (change function argument parsing and evaluation)


77 lines of code changed in 4 files:

  • AISC: aisc_commands.c (+52 -29), aisc_eval.c (+19 -2), aisc_inline.h (+5 -4), aisc_interpreter.h (+1 -1)
westram 2011-04-14 10:40 Rev.: 7414


merged from dev [7373] [7375] [7376] [7377] [7378] [7379] [7380] [7381] [7382] [7383] [7384] [7385] [7386] [7387] [7388] [7389] [7390] [7391] [7392] [7393] [7394]
* AISC interpreter
- no longer print TABs (use spaces instead)
- new command INDENT +-<num> (old tab positions act relative to current indentation)
- each stream does formatting independently
- switching between output streams does no longer interfere indentation
- added smart tabulator '$|'
- new command '--' prints empty line
- new command 'PM' prints only if further output occurs (has to be used inside PMSTART/PMEND). Used to avoid empty loops etc.
- removed command 'P\t'
- added new conditional operator '<'
- error messages dump current data-cursor position
- added new command 'CONST' (write-protects variables)
* AISC scripts (.pa)
- removed definition of TABs (use default 4)
- indented
- use smart tabs and INDENT
- better error messages when MAX_OBJECT/MAX_KEY is too small
- use operator '<' for argc-check
* code generated by AISC scripts
- removed unneeded C compatibility
- load/save code only generated when needed (i.e. in nameserver)
- fixed indentation
- fixed constness
- removed many useless return values
- made most callbacks static; replaced the one (get_XXX_CNT) used by server-code by method get_count()
- server dll-objects derived from base-class-template; commented the undefined(but working) hack there
* AISC interface (.aisc)
- fixed plenking
- translated german comments
- reorganized interface IDs to reduce max. amount of attributes. MAX_KEY 100->42
- moved relative search into own ptserver object (PT_family). MAX_KEY 42->33
- changed MAGIC numbers to make communication between client/server before and after this patch impossible
- dont save dll-header to nameserver db (does nothing but generate unused code)
* client/server code
- no longer use old fashioned typenames (struct struct_blablabla)
- fixed constness
- moved invariable code from generator to server.c
* updated description of .aisc format (eliminated duplicated files)
* possibility to pass information from Makefile into AISC scripts

549 lines of code changed in 6 files:

  • AISC: Makefile (+1), aisc.c (+190 -44), aisc_commands.c (+113 -57), aisc_eval.h (-2), aisc_interpreter.h (+219 -37), aisc_var_ref.c (+26)

(57 more)

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