Lines of Code
| Author | Changes | Lines of Code | Lines per Change |
|---|---|---|---|
| westram | 37 (100.0%) | 406 (100.0%) | 10.9 |
* reintegrates 'refactor' into 'trunk'
- eliminates old interface of {{{GBS_strstruct}}}
- add a few new unittests (editor-config string + some PT-SERVER-functions)
* adds: log:branches/refactor@19300:19338
5 lines of code changed in 1 file:
* reintegrates 'progress' into 'trunk'
- implements #789
* adds: log:branches/progress@18885:18958
1 lines of code changed in 1 file:
* remove trailing whitespace from c source.
4 lines of code changed in 1 file:
* reintegrates 'group' into 'trunk'
- misc. cleanup:
* group related functions now all accessible via menu of 1st ntree window
* DRY selection of 2 trees
* warn if annotated tree isnt visible
* fix mnemonics
* fix error handling (compare taxonomy)
* unittest comments added to tree remarks
* names
* adds: log:branches/group@17139:17159
1 lines of code changed in 1 file:
* partial merge from 'gcc' into 'trunk'
- use {{{nullptr}}} in Cxx11 (with backward compatibility)
* adds: log:branches/gcc@16683:16740,16744:16746,16751
5 lines of code changed in 1 file:
* reintegrates 'macros' into 'trunk'
- introduce generic input prompt (related #179)
- use it instead of locally generated windows:
* species (rename + create)
* alignment (rename, copy + create)
* experiments (rename, copy + create)
* genes (rename, copy + extract)
* mergetool (rename SAI + configs)
* SAIviz color translation (copy + create)
- fixed bugs in mergetool ([16503],[16504])
* adds: log:branches/macros@16484:16507
2 lines of code changed in 1 file:
* improve manual widget-attachment (i.e. w/o using xfig)
- new member {{{at_attach}}}: allows to attach widgets to right/lower border
- renamed
* {{{at_set_to}}} -> {{{at_attach_to}}}
* {{{at_unset_to}}} -> {{{at_unattach}}} (undoes effects of both at_attach-functions)
* adapt callers
* example: attaches config-icon to NE corner of 'Mark by reference..'-window
2 lines of code changed in 1 file:
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: log:branches/fixres@15127:15175
1 lines of code changed in 1 file:
* do not cast AW_POPDOWN
1 lines of code changed in 1 file:
* reintegrates 'vectorize' into 'trunk'
- adds vectorization check for gcc 4.9.x / NDEBUG compile
* adds:
- log:branches/vectorize@13428:13442
1 lines of code changed in 1 file:
- fix #460 (attempted to register tree awar w/o tree having a tree registry)
5 lines of code changed in 2 files:
* reintegrates 'dist' into 'trunk'
- implements #457 + #458
* adds:
- log:branches/dist@11501,11503,11506:11512
6 lines of code changed in 2 files:
* reintegrates 'tree' into 'trunk':
- topology ordering (beautify trees):
* new orders for radial trees
* order tree according to other tree (implements #445)
- tweaked 'Move node info' / 'Compare topology' (implements #450)
* write log entry to tree comment
* verbose output into logfile
* updated help and GUI
* adds:
- log:branches/tree@11403:11422
8 lines of code changed in 2 files:
* use typed callbacks in TREE_ADMIN
17 lines of code changed in 2 files:
* depends for [11033]
1 lines of code changed in 1 file:
* use cflags before cxxflags
1 lines of code changed in 1 file:
* renamed include variables
1 lines of code changed in 1 file:
* made A_CC and A_CXX consistent
- A_CXX previously contained cxxflags
- cxxflags are now passed down and used separately
1 lines of code changed in 1 file:
- renamed
* ACC -> A_CC
* CPP -> A_CXX (misleading atm, since it contains c++flags)
1 lines of code changed in 1 file:
- document mechanism used by ARB to export variables to submakefiles
- document most important variables
1 lines of code changed in 1 file:
- include downcast.h from arbdbt.h
(this break C++11 compilation, i.e. gcc4.8 or newer)[[BR]]
amendment:
* also broke compilation on ubuntu 13.04 and with gcc 4.7.3 (due to nameclash with boost)
1 lines of code changed in 1 file:
* depends for recent patches
3 lines of code changed in 1 file:
- effect of [9574] (comments only)
1 lines of code changed in 1 file:
- updated depends for [9520]
1 lines of code changed in 1 file:
- reintegrated branch 'cxx11'
1 lines of code changed in 1 file:
- rename
1 lines of code changed in 1 file:
* [8567] failed on WCs where shared libs were up-to-date, but not yet present in $ARBHOME/lib
- link libs directly in $ARBHOME/lib
* no longer create 'SHARED.a' in shared-library-dirs
* unit tests caused build of 'SHARED.so' (instead of 'libSHARED.so'). Every library existed twice.
- changed test-target-names for shared libaries (e.g. ARBDB/ARBDB.test -> ARBDB/libARBDB.test)
- added failing stopper targets to main-Makefile and shared-lib-Makefiles
* changed all dependencies to shared libs
* fixed dependency scripts to perform correct translations from lib/libUNIT.so <-> UNIT/UNIT.(dummy|a). omg :/
* updated predefined RESTRICT_LIB entries in UNIT_TESTER/Makefile.setup.template
- check whether RESTRICT_LIB uses obsolete test-names (e.g. ARBDB instead of libARBDB) and fail if.
1 lines of code changed in 1 file:
* global define for "no tree selected"
3 lines of code changed in 2 files:
* moved some tree admin functions into SL/TREE_ADMIN
- use them from 'Tree admin' and from 'Merge trees'
329 lines of code changed in 4 files: