Directory PRIMER_DESIGN/

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westram 2022-08-03 15:52 Rev.: 19206

* reintegrates 'ali' into 'trunk'
* adds: log:branches/ali@19183:19205

22 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+22 -11)

westram 2022-03-04 16:20 Rev.: 18964

* remove parameter {{{fallback2default}}} from
- {{{create_selection_list}}}
- {{{create_list}}}
- {{{awt_create_TREE_selection_list}}}
- {{{awt_create_CONFIG_selection_list}}}
- {{{awt_create_SAI_selection_list}}}
* remove some - now unused - locals.

1 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+1 -1)

westram 2022-03-04 12:26 Rev.: 18959

* reintegrates 'progress' into 'trunk'
- implements #789
* adds: log:branches/progress@18885:18958

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1)

westram 2021-09-15 13:52 Rev.: 18730

* remove trailing whitespace from c source.

8 lines of code changed in 2 files:

• PRIMER_DESIGN: PRD_Design.hxx (+1 -1), primer_design.cxx (+7 -7)

westram 2021-09-15 13:39 Rev.: 18725

* rename {{{CPP_OBJECTS}}} -> {{{OBJECTS}}}.

5 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+5 -5)

westram 2021-09-15 13:00 Rev.: 18720

* select units using {{{wildcard}}}.

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1 -9)

westram 2021-09-15 12:58 Rev.: 18719

* eliminate test code (CLI).

0 lines of code changed in 2 files:

• PRIMER_DESIGN: Makefile (-3), PRD_main.cxx (del)

westram 2021-08-17 15:15 Rev.: 18665

* change many WARN_TODO triggered warnings into todo markers.

1 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+1 -4)

westram 2019-04-01 17:41 Rev.: 17724

* partial merge from 'fts' into 'trunk'
- {{{ConfigMapping}}}:
* cleanup
* add missing tests
* fix config bug: trailing backslash at end of values did cause wrong read of data
* adds: log:branches/fts@17718:17723

2 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+2)

westram 2018-07-23 16:52 Rev.: 17262

* partial merge from 'group' into 'trunk'
- fixes to arb_progress
* adds:
- log:branches/group@17191:17218,17220:17260
- log:branches/progress@17195:17216,17218:17259

1 lines of code changed in 1 file:

• PRIMER_DESIGN: PRD_Design.cxx (+1 -1)

westram 2017-11-28 19:22 Rev.: 16766

* reintegrates 'gcc' into 'trunk'
- mostly cosmetics changes
* adds: log:branches/gcc@16655,16741:16743,16752:16765

69 lines of code changed in 10 files:

• PRIMER_DESIGN: PRD_Design.cxx (+27 -50), PRD_Globals.hxx (+3 -6), PRD_Item.cxx (+5 -10), PRD_Node.cxx (+6 -12), PRD_Node.hxx (+3 -3), PRD_Pair.cxx (+5 -10), PRD_Range.cxx (+4 -8), PRD_SearchFIFO.cxx (+12 -22), PRD_SequenceIterator.cxx (+4 -8), primer_design.cxx (-1)

westram 2017-11-28 18:09 Rev.: 16763

* partial merge from 'gcc' into 'trunk'
- use {{{nullptr}}} in Cxx11 (with backward compatibility)
* adds: log:branches/gcc@16683:16740,16744:16746,16751

119 lines of code changed in 6 files:

• PRIMER_DESIGN: PRD_Design.cxx (+42 -42), PRD_Item.cxx (+1 -1), PRD_Node.cxx (+5 -5), PRD_Pair.cxx (+8 -8), PRD_SearchFIFO.cxx (+43 -43), primer_design.cxx (+20 -21)

westram 2017-08-09 14:59 Rev.: 16223

* reintegrates 'cover' into 'trunk'
- fixes compilation with COVERAGE
* ARB perl module failed to load (since [13739])
* linking executables broken (apparently since [14038])
* adds: log:branches/cover@16213:16222

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1 -1)

westram 2016-08-11 11:05 Rev.: 15176

* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: log:branches/fixres@15127:15175

14 lines of code changed in 3 files:

• PRIMER_DESIGN: Makefile (+4), PRD_Item.cxx (+5 -2), PRD_Pair.cxx (+5 -4)

westram 2016-04-16 14:52 Rev.: 14731

* mark code binding callbacks to non-button-widgets (probably incomplete; see #559 for details)

2 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+2 -2)

westram 2015-11-04 10:57 Rev.: 14453

* do not cast AW_POPDOWN

2 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+2 -2)

westram 2015-10-28 19:12 Rev.: 14434

* use typed callbacks in AWTI, PRIMER_DESIGN, SEQ_QUALITY and REFENTRIES

17 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+17 -18)

westram 2015-07-31 17:33 Rev.: 14122

* document primer design result window

1 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+1 -1)

westram 2015-04-03 17:51 Rev.: 13665

* added less custom ways to install config-managers:
- using fixed mapping ({{{AWT_config_mapping_def}}})
- using a setup-callback for {{{AWT_config_definition}}}
* replaced all config-managers by less custom versions where possible. Exceptions:
- NDS (does some custom conversion from older data-format)
- merge-tool/gene-species (uses user-defined definitions-sets)

1 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+1 -11)

westram 2015-04-03 13:27 Rev.: 13662

* replace manual/widget-bound by awar-bound update-callbacks (motivation: eliminate custom call in {{{primer_design_restore_config}}})
* display memory estimation non-editable
* allow explicit primer length (no reason to insist on a length-range>1)

56 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+56 -57)

westram 2015-04-03 13:20 Rev.: 13661

- fix progress counter

1 lines of code changed in 1 file:

• PRIMER_DESIGN: PRD_Design.cxx (+1 -1)

westram 2015-01-23 15:19 Rev.: 13443

* reintegrates 'vectorize' into 'trunk'
- adds vectorization check for gcc 4.9.x / NDEBUG compile
* adds:
- log:branches/vectorize@13428:13442

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1 -1)

westram 2014-09-11 13:27 Rev.: 12848

* reintegrates 'fix' into 'trunk'
- removes calls to {{{aw_string_selection}}} and {{{aw_string_selection2awar}}} (implementing another step for #179)
* adds:
- log:branches/fix@12839:12847

11 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+11 -11)

epruesse 2014-09-02 17:51 Rev.: 12815

fix common typos reported by lintian
- splitted -> split (irregular verb)
- ressources -> resources
- explicitely -> explicitly

1 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+1 -1)

westram 2014-09-01 14:10 Rev.: 12803

* merge from 'alilink' into 'trunk'
* adds:
- log:branches/alilink@12801:12802

2 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+2 -2)

westram 2014-05-09 15:43 Rev.: 12186

* AW_window::create_selection_list expects new parameter 'fallback2default'
- change calls outside WINDOW (pass 'true' everywhere, which previous default behavior in gtk)

1 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+1 -1)

westram 2014-04-25 11:04 Rev.: 12085

* use typed callbacks in
- PROBE_DESIGN (complete)
- AWT (incomplete; several need deeper changes)

4 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+4 -4)

westram 2014-01-28 18:13 Rev.: 11512

* merge [11502,11504,11505] from 'dist' into 'trunk'
* adds:
- log:branches/dist@11502,11504:11505

3 lines of code changed in 2 files:

• PRIMER_DESIGN: primer_design.cxx (+2 -3), primer_design.hxx (+1 -1)

westram 2014-01-10 20:16 Rev.: 11464

- un-dummy-fied transaction (renames only)

3 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+3 -3)

westram 2013-11-27 19:55 Rev.: 11248

- need cb.h in awt_sel_boxes.hxx

0 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (-1)

westram 2013-11-03 15:42 Rev.: 11060

* reintegrates 'ptsfix' into 'trunk':
* adds:
- log:branches/ptsdump@8966:9000
- log:branches/ptsfix@8965:9012,9014:9017,9019:9023,9025:9046,9048:9089,9091:9114,9116:9132,9134:9139,9141:9145,9147:9151,9153:9158,9160:9379,9381:11059
- log:branches/ptsstartup@9160:9235,9237:9278,9280:9336,9339:9361,9363:9446
- log:branches/ptsundef@9061:9358

2 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+2 -2)

westram 2013-11-02 17:41 Rev.: 11034

* depends for [11033]

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1)

westram 2013-10-31 18:14 Rev.: 11007

* prototype for GBK_terminate differed between arb_core.h and arb_msg.h

6 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+6)

westram 2013-10-31 16:40 Rev.: 11002

* 'class { public' -> struct

2 lines of code changed in 1 file:

• PRIMER_DESIGN: PRD_Globals.hxx (+2 -4)

westram 2013-10-31 15:10 Rev.: 10996

* use cflags before cxxflags

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1 -1)

westram 2013-10-30 16:58 Rev.: 10974

* renamed include variables

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1 -1)

westram 2013-10-29 13:55 Rev.: 10956

* made A_CC and A_CXX consistent
- A_CXX previously contained cxxflags
- cxxflags are now passed down and used separately

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1 -1)

westram 2013-10-29 13:23 Rev.: 10955

- renamed
* ACC -> A_CC
* CPP -> A_CXX (misleading atm, since it contains c++flags)

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1 -1)

westram 2013-10-29 12:43 Rev.: 10954

- document mechanism used by ARB to export variables to submakefiles
- document most important variables

1 lines of code changed in 1 file:

• PRIMER_DESIGN: Makefile (+1 -1)

westram 2013-10-21 14:16 Rev.: 10863

* replaced usage of untyped AW_POPUP_HELP

2 lines of code changed in 1 file:

• PRIMER_DESIGN: primer_design.cxx (+2 -2)

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