Directory lib/import/nonformats/

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westram 2009-07-01 17:19 Rev.: 6096

* Again allow display of hidden files in filter list (reverts part of [6082])
* renamed all rarely-used import filters into .importfilter
- user has to click on 'Show hidden files' to show these filters or to use them in AUTODETECT
* moved a few sub-filters to nonformats
* added .fasta_contextual_data_1_03.ift (thx to Renzo, Joerg and Frank Oliver)
* added fasta_wacc import/export filters (thx to Harald)

173 lines of code changed in 4 files:

• lib/import/nonformats: dssp_2nd_struct.ift (new 50), dssp_all.ift (new 54), dssp_sequence.ift (new 50), nexus.ift (new 19)

westram 2009-07-01 14:38 Rev.: 6092

* import filters mostly SILVA compatible (thx to Frank Oliver)
* moved feature-table into separate filter which is included by longebi.ift and longgenbank.ift
* added AUTOTAGging (commented out)

376 lines of code changed in 3 files:

• lib/import/nonformats: feature_table.ift (new 259), longebi.ift (+54 -288), longgenbank.ift (+63 -308)

westram 2009-06-13 14:49 Rev.: 6053

* Errors about undefined variables in inport-formats had some meaning for the writer of the input-format, but none for the user of the format.
* new command IFNOTSET for ift
- each 'SETVAR x' expects a corresponding 'IFNOTSET x msg' (and vv.)
* undef error prints reason defined by IFNOTSET
* fixed import filters
* checked feature table sections in longebi.ift and longgenbank.ift for similarity
- typo 'secimen_voucher'
* updated help

113 lines of code changed in 2 files:

• lib/import/nonformats: longebi.ift (+65 -52), longgenbank.ift (+48 -41)

westram 2008-06-06 14:23 Rev.: 5390

- TAB-Ex

628 lines of code changed in 2 files:

• lib/import/nonformats: longebi.ift (+322 -322), longgenbank.ift (+306 -306)

westram 2007-12-07 14:57 Rev.: 4986

- latest fixes from WL

3 lines of code changed in 1 file:

• lib/import/nonformats: longgenbank.ift (+3 -3)

westram 2007-12-06 13:58 Rev.: 4973

- various keywords changed

41 lines of code changed in 1 file:

• lib/import/nonformats: longgenbank.ift (+41 -38)

westram 2007-12-06 13:58 Rev.: 4972

- typo, OC->OS

5 lines of code changed in 1 file:

• lib/import/nonformats: longebi.ift (+5 -5)

westram 2007-11-30 20:13 Rev.: 4962

- some changes by WL

75 lines of code changed in 1 file:

• lib/import/nonformats: longebi.ift (+75 -65)

westram 2007-11-21 17:17 Rev.: 4954

- moved from ../genbank.ift
- feature table parsing identical with longebi.ift

397 lines of code changed in 1 file:

• lib/import/nonformats: longgenbank.ift (new 397)

westram 2007-11-21 17:17 Rev.: 4953

- modified embl import-filter (WL)
- feature table parsing identical with longgenbank.ift

170 lines of code changed in 1 file:

• lib/import/nonformats: longebi.ift (+170 -126)

westram 2007-01-27 14:30 Rev.: 4300

- 'medline'->'medline_id', 'gene_pos'->'nuc_rp', 'pubmed'->'pubmed_id'

3 lines of code changed in 1 file:

• lib/import/nonformats: longebi.ift (+3 -3)

westram 2005-03-17 17:29 Rev.: 3771

- new version; runs after embl_gen_long_features.pl; will be modified by WL

356 lines of code changed in 1 file:

• lib/import/nonformats: longebi.ift (new 356)