Directory PERL_SCRIPTS/ARBTOOLS/IFTHELP/

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westram 2014-09-19 15:09 Rev.: 12892

* generally do not link scripts in
- PERL_SCRIPTS/ARBTOOLS/IFTHELP
- PERL_SCRIPTS/ARBTOOLS/TESTS
into bin

8 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: README (new 8)

westram 2010-01-12 20:00 Rev.: 6345

- fixed hard readable '} else {'

2 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: format_dssp.pl (+2 -1)

westram 2009-06-13 09:50 Rev.: 6046

* use faster method reading input

1 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: embl_gen_long_features.pl (+1 -1)

westram 2009-05-23 15:02 Rev.: 5937

* patch http://bugs.arb-home.de/attachment/ticket/172/gb_multi_perl from Elmar (thx)
* fixes #172

1 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: genbank_gen_long_features.pl (+1 -1)

westram 2009-04-24 13:25 Rev.: 5858

* fixed errors and warnings in perl scripts

3 lines of code changed in 3 files:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: embl_gen_long_features.pl (+1 -1), format_dssp.pl (+1 -1), genbank_gen_long_features.pl (+1 -1)

westram 2008-12-25 14:03 Rev.: 5675

- removed automatic timestamps (the best they were good for, were vc-conflicts)

0 lines of code changed in 2 files:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: embl_gen_long_features.pl (-1), genbank_gen_long_features.pl (-2)

westram 2008-06-06 14:23 Rev.: 5390

- TAB-Ex

68 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: format_dssp.pl (+68 -68)

murban 2008-02-08 20:13 Rev.: 5044

added functions for protein structure comparison; added import filters and perl script for dssp files; added menu entry in EDIT4 for choosing the active protein structure SAI

104 lines of code changed in 2 files:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: dssp2fasta.pl (del), format_dssp.pl (new 104)

westram 2007-12-07 14:33 Rev.: 4985

- reset mode at end of sequence data.
Now files with multiple entries work as well

4 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: genbank_gen_long_features.pl (+4 -1)

westram 2007-12-06 19:58 Rev.: 4982

- converts secondary structure into 2nd species

5 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: dssp2fasta.pl (+5 -1)

murban 2007-12-06 17:06 Rev.: 4978

- dssp -> fasta converter

37 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: dssp2fasta.pl (new 37)

westram 2007-11-21 17:17 Rev.: 4951

- unwrap long qualifiers
- prefix with FT and FTx. Makes feature table
compatible with EMBL format

76 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: genbank_gen_long_features.pl (new 76)

westram 2007-11-06 16:43 Rev.: 4924

- fixed perl path

1 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: embl_gen_long_features.pl (+1 -1)

westram 2005-03-18 16:28 Rev.: 3772

- fix for feature names (may also contain non-identifier characters)

4 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: embl_gen_long_features.pl (+4 -3)

westram 2005-03-17 17:28 Rev.: 3768

- perl script to change embl feature table for more simple
ift-parsing

64 lines of code changed in 1 file:

• PERL_SCRIPTS/ARBTOOLS/IFTHELP: embl_gen_long_features.pl (new 64)