Directory BINDEP/

Lines of Code

Developers

Most Recent Commits

westram 2020-04-06 15:18 Rev.: 18437

* reintegrates 'io' into 'trunk'
* adds: log:branches/io@18428:18436

4 lines of code changed in 1 file:

• BINDEP: needs_libs.arb_export_newick (new 4)

westram 2018-04-25 11:08 Rev.: 16919

* reintegrates 'pvp' into 'trunk'
- adds {{{arb_calc_pvp}}} (CLI tool to calculate posvar)
* adds: log:branches/pvp@16906:16918

10 lines of code changed in 2 files:

• BINDEP: needs_libs.arb_calc_pvp (new 7), needs_libs.arb_sub2ascii (new 3)

westram 2017-10-03 18:26 Rev.: 16469

* reintegrates 'textedit' into 'trunk'
- fixes #586
* editor now always started asynchronously
* uses inotify to track file changes
- ~~also use inotify to track directory updates (in order to update file selections when needed)~~\\(./) by [16515] ff.; merged by [16551]
* adds: log:branches/textedit@16448:16468

0 lines of code changed in 1 file:

• BINDEP: needs_libs.arb_notify (del)

westram 2017-07-12 11:08 Rev.: 16127

* reintegrates 'fix' into 'trunk'
- misc. minor fixes + cleanups
* adds: log:branches/fix@16121:16126

47 lines of code changed in 10 files:

• BINDEP: README (new 10), needs_libs.arb_2_ascii (new 3), needs_libs.arb_2_bin (new 4), needs_libs.arb_export_seq_filtered (new 5), needs_libs.arb_export_sequences (new 5), needs_libs.arb_flush_mem (new 4), needs_libs.arb_probe_match (new 5), needs_libs.arb_proto_2_xsub (new 4), needs_libs.arb_replace (new 3), needs_libs.arb_write_tree_comment (new 4)

westram 2013-09-12 18:02 Rev.: 10577

- added a bunch of small arb tools into dependency decls

45 lines of code changed in 12 files:

• BINDEP: needs_libs.arb_a2ps (new 3), needs_libs.arb_consensus_tree (new 4), needs_libs.arb_dnarates (new 4), needs_libs.arb_export_rates (new 4), needs_libs.arb_export_tree (new 4), needs_libs.arb_gene_probe (new 3), needs_libs.arb_help2xml (new 4), needs_libs.arb_message (new 4), needs_libs.arb_notify (new 4), needs_libs.arb_primer (new 4), needs_libs.arb_probe (new 4), needs_libs.arb_read_tree (new 3)

westram 2013-06-12 12:54 Rev.: 10137

- removes PGT (sacrificed to gtk port)

0 lines of code changed in 1 file:

• BINDEP: needs_libs.arb_pgt (del)

westram 2011-12-01 12:41 Rev.: 8273

- removed dead ALIV3

0 lines of code changed in 1 file:

• BINDEP: needs_libs.aliv3 (del)

westram 2011-08-25 23:30 Rev.: 7895

* added arb_rnacma (correlated mutation analysis) written by Breno Faria
- fixed compilation and runtime errors

5 lines of code changed in 1 file:

• BINDEP: needs_libs.arb_rnacma (new 5)

westram 2011-08-08 10:22 Rev.: 7819

merge from dev [7774] [7778] [7779] [7780] [7781] [7782] [7783] [7784] [7785] [7786] [7787] [7788] [7789] [7790] [7791] [7792] [7793] [7794] [7795] [7796] [7817]
* fixes/improvements to build ARB on multicores
- made dependencies between targets explicit (let make resolve them)
- fixed several failures caused by async calls ('dep_graph', 'up', tests)
- try to make 'perl' 1st ("big target")
* other changes
- ctags (bug in 5.8; tag-order)
- removed obsolete things from Makefiles
- added SOURCE_TOOLS/remake_after_change.pl (call from ARB subdirs, knows what to do)
- tests use own ARB_PID (no clash with running ARB)

8 lines of code changed in 3 files:

• BINDEP: needs_libs.arb_convert_aln (new 4), needs_libs.arb_dist (+1), needs_libs.arb_pt_server (+3 -1)

westram 2010-02-17 10:30 Rev.: 6448

- added library dependency declarations

68 lines of code changed in 13 files:

• BINDEP: needs_libs.aliv3 (new 6), needs_libs.arb_db_server (new 5), needs_libs.arb_dist (new 5), needs_libs.arb_edit4 (new 5), needs_libs.arb_naligner (new 5), needs_libs.arb_name_server (new 6), needs_libs.arb_ntree (new 4), needs_libs.arb_pars (new 5), needs_libs.arb_pgt (new 5), needs_libs.arb_phylo (new 5), needs_libs.arb_pt_server (new 7), needs_libs.arb_treegen (new 5), needs_libs.arb_wetc (new 5)