ARB
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#include <arbtools.h>
Inherited by AISC_Object, ALI_ALIGNER [private, virtual]
, ali_aligner_column [virtual]
, ali_aligner_dellist [virtual]
, ali_aligner_last_cell [virtual]
, ali_aligner_result [virtual]
, ALI_ARBDB [private, virtual]
, ALI_MAP [private, virtual]
, ALI_NORM_SEQUENCE [private, virtual]
, ALI_PATHMAP [private, virtual]
, ALI_PREALIGNER [private, virtual]
, ali_prealigner_approx_element [virtual]
, ali_prealigner_approximation [virtual]
, ali_prealigner_column [virtual]
, ALI_PROFILE [private, virtual]
, ALI_PT [private, virtual]
, ali_pt_member [virtual]
, ALI_sellst_spec [private, virtual]
, ALI_SEQUENCE [private, virtual]
, ALI_SUB_SOLUTION [private, virtual]
, ALI_TARRAY< T > [private, virtual]
, ALI_TARRAY< ali_pathmap_up_pointer > [private, virtual]
, ALI_TLIST< T > [private, virtual]
, ALI_TLIST< ali_aligner_dellist_elem * > [private, virtual]
, ALI_TLIST< ALI_MAP * > [private, virtual]
, ALI_TLIST< ali_pathmap_up_pointer > [private, virtual]
, ALI_TLIST< ali_prealigner_approx_element * > [private, virtual]
, ALI_TLIST< ali_pt_member * > [private, virtual]
, ALI_TSTACK< T > [private, virtual]
, AliCompositeCommand [private, virtual]
, AlignBuffer [private, virtual]
, Aligner [private, virtual]
, AlignmentReference [private, virtual]
, AP_main [private, virtual]
, AP_matrix [private, virtual]
, AP_pos_var [private, virtual]
, AP_rates [virtual]
, AP_sequence [private, virtual]
, AP_tree_edge [private, virtual]
, arb_prm_struct [virtual]
, arb_progress [private, virtual]
, arb_r2a_pro_2_nuc [virtual]
, arb_r2a_pro_2_nucs [virtual]
, arb_suppress_progress [private, virtual]
, arb_test::asserter [private, virtual]
, ArbDBWriter [private, virtual]
, ArbImporter [private, virtual]
, ArbProgress::counter [private, virtual]
, ArbProgress::nestable [private, virtual]
, ArbStringCache [private, virtual]
, ArbTcpDat [private, virtual]
, ArgParser [private, virtual]
, auto_delete_array_ptr< T > [private, virtual]
, auto_delete_ptr< T > [private, virtual]
, auto_free_ptr< T > [private, virtual]
, AW_awar [private, virtual]
, AW_buttons_struct [virtual]
, AW_cb [private, virtual]
, AW_click_cd [private, virtual]
, AW_GC [private, virtual]
, AW_gc_manager [private, virtual]
, AW_GC_set [private, virtual]
, AW_root [private, virtual]
, AW_root_cblist [private, virtual]
, AW_root_Motif [private, virtual]
, AW_selection [private, virtual]
, AW_selection_list [private, virtual]
, AW_selection_list_entry [private, virtual]
, AW_stylable [private, virtual]
, AW_timer_cb_struct [private, virtual]
, AW_widget_refresh_cb [virtual]
, AW_widget_value_pair [virtual]
, AW_window [private, virtual]
, AW_window_Motif [private, virtual]
, aw_xargs [private, virtual]
, AW_xfig [private, virtual]
, AWT_canvas [private, virtual]
, AWT_config [private, virtual]
, AWT_config_definition [private, virtual]
, AWT_distance_meter [private, virtual]
, AWT_graphic_event [private, virtual]
, AWT_graphic_parsimony [private, virtual]
, AWT_graphic_tree [private, virtual]
, awt_hotkeys [private, virtual]
, awt_input_mask_global [private, virtual]
, awt_linked_to_item [private, virtual]
, AWT_translator [private, virtual]
, BackTraceInfo [private, virtual]
, Bakt_Info [private, virtual]
, BaseFrequencies [private, virtual]
, BasePosition [private, virtual]
, BasicStatus [private, virtual]
, BI_helix [private, virtual]
, Bitvector [private, virtual]
, BoundActionTracker [private, virtual]
, BoundTreeAwarCallback [private, virtual]
, BoundWindowCallback [private, virtual]
, BranchLinewidthScaler [private, virtual]
, BranchWindow [private, virtual]
, cache::CacheHandle< SMARTPTR > [private, virtual]
, cache::CacheHandle< SmartCharPtr > [private, virtual]
, cache::CacheHandle< SmartIntPtr > [private, virtual]
, ChainEntryBuffer [private, virtual]
, ChainIteratorStage1 [private, virtual]
, ChainIteratorStage2 [private, virtual]
, CharPtrArray [private, virtual]
, chartable::SepBaseFreq [private, virtual]
, CheckedConsistencies [private, virtual]
, CLI [private, virtual]
, CLI [private, virtual]
, CLI [private, virtual]
, Cluster [private, virtual]
, ClustersData [private, virtual]
, Column [virtual]
, ColumnStat [private, virtual]
, CombinableSeq [private, virtual]
, CommandOutput [private, virtual]
, CompactedSequence [private, virtual]
, ConfigDefinition [private, virtual]
, ConfigModifier [virtual]
, CursorPos [private, virtual]
, custom_dealloc_ptr< T, DEALLOC > [private, virtual]
, Data [private, virtual]
, Data [virtual]
, db_interrupt_data [virtual]
, DBwriter [private, virtual]
, DecisionTree [private, virtual]
, DeconstructedTree [private, virtual]
, DefinedCommands [private, virtual]
, DelayReshade [private, virtual]
, DesignTargets [private, virtual]
, DI_ENTRY [private, virtual]
, DI_GLOBAL_MATRIX [private, virtual]
, DI_MATRIX [private, virtual]
, di_protdist [private, virtual]
, Dict [private, virtual]
, difflineMode [private, virtual]
, DisplayFormat [private, virtual]
, Dots [private, virtual]
, ED4_base [private, virtual]
, ED4_block [private, virtual]
, ED4_block_operator [private, virtual]
, ED4_container [private, virtual]
, ED4_cursor [private, virtual]
, ED4_Edit_String [private, virtual]
, ED4_foldable [private, virtual]
, ED4_folding_line [private, virtual]
, ED4_host [private, virtual]
, ED4_list< T > [private, virtual]
, ED4_list_elem< T > [private, virtual]
, ED4_MostRecentWinContext [private, virtual]
, ED4_objspec, ED4_objspec_registry [private, virtual]
, ED4_reference [private, virtual]
, ED4_reference_terminals [private, virtual]
, ED4_remap [private, virtual]
, ED4_root [private, virtual]
, ED4_scrolled_rectangle [private, virtual]
, ED4_SearchResults [private, virtual]
, ED4_species_pointer [private, virtual]
, EdgeChain [private, virtual]
, EditedTerminal [private, virtual]
, EG2PS_data [virtual]
, EntryRemover [private, virtual]
, ExecutingMacro [private, virtual]
, export_format [virtual]
, export_sequence_data [private, virtual]
, ExportFieldTracker [private, virtual]
, Expression [private, virtual]
, FamilyFinder [private, virtual]
, FamilyList [private, virtual]
, FamilyStat [private, virtual]
, FastAlignInsertion [private, virtual]
, FastAlignReport [private, virtual]
, FastSearchOccurrence [private, virtual]
, FastSearchSequence [private, virtual]
, FieldTransfer::ItemClonedByRuleSet [private, virtual]
, FileContent [private, virtual]
, FileWatch [private, virtual]
, FileWriter [private, virtual]
, FilteredExport [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FINAL_TYPE< SEQTYPE > [private, virtual]
, FormattedFile [private, virtual]
, FormatTester [private, virtual]
, gb_cache [virtual]
, GB_DbScanner [virtual]
, gb_local_data [private, virtual]
, GB_MAIN_TYPE [private, virtual]
, GB_securityLevel [private, virtual]
, GB_shell4perl [virtual]
, GB_transaction [private, virtual]
, GBENTRY_memory [private, virtual]
, GBL_call_env [private, virtual]
, GBL_command_arguments [private, virtual]
, GBL_command_lookup_table [private, virtual]
, GBL_env [private, virtual]
, GBS_strstruct [private, virtual]
, GBT_config [private, virtual]
, GBT_config_item [virtual]
, GBT_config_parser [private, virtual]
, GEN_graphic [private, virtual]
, GEN_map_manager [private, virtual]
, GEN_root [private, virtual]
, Generation [private, virtual]
, GenerationDuplicates [private, virtual]
, Globals [virtual]
, GroupBuilder [private, virtual]
, GroupSearch [private, virtual]
, GroupSearchCommon [private, virtual]
, GroupUIdata [private, virtual]
, hash [private, virtual]
, Header [private, virtual]
, HeaderList [private, virtual]
, HelixAlignmentQuality [private, virtual]
, Hit [private, virtual]
, hits_sort_params [virtual]
, Hs_struct [virtual]
, import_format [virtual]
, import_match [virtual]
, Importer [private, virtual]
, ImportSession [virtual]
, ImportTestData [virtual]
, InfoWindow [private, virtual]
, InputFormat [private, virtual]
, Interpreter [private, virtual]
, Item [virtual]
, KeyInfo [private, virtual]
, KeySorter [private, virtual]
, Label [private, virtual]
, LazyAliData [private, virtual]
, LikelihoodRanges [private, virtual]
, LineBuf [private, virtual]
, LineQueue [private, virtual]
, LineReader [private, virtual]
, List< Type > [private, virtual]
, List< char > [private, virtual]
, List< result_struct > [private, virtual]
, List< Sondentopf > [private, virtual]
, List< void * > [private, virtual]
, list_elem< Type > [private, virtual]
, list_elem< char > [private, virtual]
, list_elem< result_struct > [private, virtual]
, list_elem< Sondentopf > [private, virtual]
, list_elem< void * > [private, virtual]
, ListDisplayRow [private, virtual]
, LocallyModify< T > [private, virtual]
, LocallyModify< int > [private, virtual]
, Location, LocationEditor [private, virtual]
, MackeReader [private, virtual]
, MarkerIdentifier [private, virtual]
, MatchRequest [private, virtual]
, MatrixOrder [private, virtual]
, MemBlock [private, virtual]
, MemBlockManager [private, virtual]
, Memory [private, virtual]
, merge_scheme [virtual]
, MessageSpamFilter [private, virtual]
, MetaInfo [private, virtual]
, MetaTagTranslator [private, virtual]
, MG_remap [private, virtual]
, MG_remaps [private, virtual]
, MO_Liste [private, virtual]
, MostUsedPos [private, virtual]
, MP_Main [private, virtual]
, MP_Window [private, virtual]
, MutationsPerSite [private, virtual]
, Mutex [private, virtual]
, NA_Alignment [virtual]
, NamedCommand [private, virtual]
, NameInformation [private, virtual]
, NameServerConnection [private, virtual]
, Node [private, virtual]
, NodeState [virtual]
, NodeTextBuilder [private, virtual]
, NT_global [virtual]
, NT_TreeShader [private, virtual]
, NtreeCommandLine [private, virtual]
, OrgInfo [virtual]
, OutgroupMatcher [private, virtual]
, Output [private, virtual]
, Package [private, virtual]
, Pair [virtual]
, ParentCache [private, virtual]
, ParentGroupNameQueryKey [private, virtual]
, ParsedProbeMatch [private, virtual]
, Parser [private, virtual]
, Parser [private, virtual]
, PARSIMONY_testenv< SEQTYPE > [private, virtual]
, PartQueue [private, virtual]
, PartRegistry [private, virtual]
, PH_filter [private, virtual]
, PH_NEIGHBOURJOINING [private, virtual]
, PH_root [private, virtual]
, PHDATA [private, virtual]
, PrimerDesign [private, virtual]
, PrintMaybe [private, virtual]
, probe_combi_statistic [private, virtual]
, probe_input_data [private, virtual]
, probe_tabs [private, virtual]
, ProbeMatch_impl [private, virtual]
, ProbeMatchEventParam [virtual]
, ProbeMatchParser [private, virtual]
, ProbeValuation [private, virtual]
, PromptData [virtual]
, PS_BitMap [private, virtual]
, PS_BitSet [private, virtual]
, PS_Candidate [private, virtual]
, PS_FileBuffer [private, virtual]
, PS_Node [private, virtual]
, PT_compressed [private, virtual]
, QUERY::DbQuery [private, virtual]
, QueryExpr [private, virtual]
, QueryTarget [private, virtual]
, RandomNumberGenerator [private, virtual]
, RDP_comments [virtual]
, Reader [private, virtual]
, RealignAttempt [private, virtual]
, RecordingMacro [private, virtual]
, RefEntries::RefSelector [private, virtual]
, References [private, virtual]
, Refs< REF > [private, virtual]
, Refs< Emblref > [private, virtual]
, Refs< GenbankRef > [private, virtual]
, RegExpr [private, virtual]
, RNA3D_Global [virtual]
, RNA3D_Graphics [virtual]
, SAI_graphic [virtual]
, SAI_sellst_spec [private, virtual]
, SaiCalcEnv [private, virtual]
, SaiCalculator [private, virtual]
, saiProbeData [private, virtual]
, search_windows, SearchFIFO [private, virtual]
, SearchRelativeParams [virtual]
, SearchSettings [private, virtual]
, SearchTree [private, virtual]
, SearchTreeNode [private, virtual]
, SEC_base [private, virtual]
, SEC_base_part [private, virtual]
, SEC_db_interface [private, virtual]
, SEC_drawn_positions [private, virtual]
, SEC_region [private, virtual]
, SEC_root [private, virtual]
, SEC_seq_data [private, virtual]
, SelectedDatabase [private, virtual]
, Seq [private, virtual]
, SeqInfo [virtual]
, SequenceBuffer [private, virtual]
, SequenceHandler [private, virtual]
, SlaveCanvas [private, virtual]
, Smoother [private, virtual]
, Sonde [private, virtual]
, Sondentopf [private, virtual]
, SortByTopo [private, virtual]
, SortedFreq [private, virtual]
, SpeciesSelector [private, virtual]
, SpeciesSpace [private, virtual]
, SpecificAliData< T > [private, virtual]
, SpecificAliData< char > [private, virtual]
, SpecSet [private, virtual]
, SpecSetRegistry [private, virtual]
, SQ_helix [private, virtual]
, st_check_cb_data, ST_Container [virtual]
, ST_ML [private, virtual]
, StackFrameData [private, virtual]
, startsWithBlanks [private, virtual]
, Store_species [private, virtual]
, StrictlyAliased_BasePtrRef< DERIVED, BASE > [private, virtual]
, Structure3D [virtual]
, StrUniquifier [private, virtual]
, SuppressOutput [private, virtual]
, symmetric_matrix< T > [private, virtual]
, symmetric_matrix< AP_FLOAT > [private, virtual]
, symmetric_matrix< int > [private, virtual]
, SymmetricMatrixMapper [private, virtual]
, TargetGroup [private, virtual]
, Token [private, virtual]
, TokenList [private, virtual]
, TokenListBlock [private, virtual]
, TokenMatcher [private, virtual]
, TrackedFile, TrackedFiles [private, virtual]
, TreeAwarRegistry [private, virtual]
, TreeNode [virtual]
, TreeReader [private, virtual]
, TreeRoot [private, virtual]
, TripleOffset [private, virtual]
, UniqueNameDetector [private, virtual]
, UserActionTracker [private, virtual]
, VarUpdateInfo [private, virtual]
, Warnings [private, virtual]
, WeightedFilter [private, virtual]
, WrapMode [private, virtual]
, Writer [private, virtual]
, XML_Node [private, virtual]
, and XString [private, virtual]
.
Public Member Functions | |
Noncopyable () | |
Definition at line 39 of file arbtools.h.
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inline |
Definition at line 43 of file arbtools.h.