SEC_seq_data Class Reference

#include <SEC_db.hxx>

Inheritance diagram for SEC_seq_data:

Collaboration diagram for SEC_seq_data:

Public Member Functions
	SEC_seq_data (GBDATA *gb_item, const char *aliname, const SEC_dbcb *reload_item)
	~SEC_seq_data ()
bool	valid () const
size_t	length () const
char	data (size_t abspos) const
const char *	sequence () const

Detailed Description

Definition at line 55 of file SEC_db.hxx.

Constructor & Destructor Documentation

SEC_seq_data::SEC_seq_data	(	GBDATA *	gb_item,
		const char *	aliname,
		const SEC_dbcb *	reload_item
	)

Definition at line 52 of file SEC_db.cxx.

References cb, GB_add_callback(), GB_CB_CHANGED_OR_DELETED, GB_FIND, GB_read_string(), GB_read_string_count(), GB_search(), GBT_find_sequence(), and sec_dbcb().

SEC_seq_data::~SEC_seq_data

(

)

Definition at line 63 of file SEC_db.cxx.

References GB_CB_CHANGED_OR_DELETED, GB_remove_callback(), and sec_dbcb().

Member Function Documentation

bool SEC_seq_data::valid ( ) const

inline

Definition at line 66 of file SEC_db.hxx.

Referenced by length(), and sequence().

size_t SEC_seq_data::length ( ) const

inline

Definition at line 67 of file SEC_db.hxx.

References sec_assert, and valid().

Referenced by data().

char SEC_seq_data::data ( size_t  abspos ) const

inline

Definition at line 68 of file SEC_db.hxx.

References length(), and sec_assert.

Referenced by SEC_db_interface::baseAt(), and SEC_db_interface::update_shown_positions().

const char* SEC_seq_data::sequence ( ) const

inline

Definition at line 73 of file SEC_db.hxx.

References sec_assert, and valid().

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The documentation for this class was generated from the following files:

• SECEDIT/SEC_db.hxx
• SECEDIT/SEC_db.cxx