ARB: probe_combi_statistic Class Reference

ARB

#include <MP_probe.hxx>

Inheritance diagram for probe_combi_statistic:

Inheritance graph

Collaboration diagram for probe_combi_statistic:

Collaboration graph

Public Member Functions
void	set_probe_combi (int j, probe *f)

probe *	get_probe_combi (int j)

double	get_fitness ()

double	get_expected_children ()

int	sub_expected_children (double val)

void	init_stats ()

void	scale (double a, double b)

bool	ok_for_next_gen (int &len_roul_wheel)

void	sub_life_counter ()

void	init_life_counter ()

bool	is_dead ()

void	sigma_truncation (double average_fit, double dev)

double	calc_fitness (int len_of_field)

double	calc_expected_children (double average_fitness)

void	mutate_Probe ()

void	crossover_Probes (probe_combi_statistic *pcombi2)

void	swap (probe a, probe b)

void	sort (long feld_laenge)

probe_combi_statistic *	duplicate ()

probe_combi_statistic *	check_duplicates (GenerationDuplicates *dup_tree=NULp)

int	calc_index_system3 (int *field)

void	print ()

void	print (probe *p)

void	print (probe **arr, int length)

	probe_combi_statistic (probe *pc=NULp, probe_tabs ps=NULp, double exp=0, double fit=0, int lifec=MAXLIFEFORCOMBI)

	~probe_combi_statistic ()

Detailed Description

Definition at line 45 of file MP_probe.hxx.

Constructor & Destructor Documentation

probe_combi_statistic::probe_combi_statistic	(	probe **	pc = `NULp`,
		probe_tabs *	ps = `NULp`,
		double	exp = `0`,
		double	fit = `0`,
		int	lifec = `MAXLIFEFORCOMBI`
	)

Definition at line 14 of file MP_probe_combi_statistic.cxx.

References mp_gl_awars, awar_vars::no_of_probes, and NULp.

Referenced by duplicate().

probe_combi_statistic::~probe_combi_statistic ( )

Definition at line 35 of file MP_probe_combi_statistic.cxx.

Member Function Documentation

void probe_combi_statistic::set_probe_combi	(	int	j,
		probe *	f
	)

inline

Definition at line 63 of file MP_probe.hxx.

Referenced by Generation::gen_determ_combis(), and Generation::init_valuation().

probe* probe_combi_statistic::get_probe_combi ( int j )

inline

Definition at line 64 of file MP_probe.hxx.

Referenced by Generation::gen_determ_combis(), GenerationDuplicates::insert(), and ProbeValuation::insert_in_result_list().

double probe_combi_statistic::get_fitness ( )

inline

Definition at line 66 of file MP_probe.hxx.

Referenced by Generation::calcFitness(), and ProbeValuation::insert_in_result_list().

double probe_combi_statistic::get_expected_children ( )

inline

Definition at line 67 of file MP_probe.hxx.

Referenced by ok_for_next_gen().

int probe_combi_statistic::sub_expected_children ( double val )

Definition at line 143 of file MP_probe_combi_statistic.cxx.

References MULTROULETTEFACTOR, and result.

void probe_combi_statistic::init_stats ( )

Definition at line 252 of file MP_probe_combi_statistic.cxx.

References MAXLIFEFORCOMBI.

Referenced by crossover_Probes(), and mutate_Probe().

void probe_combi_statistic::scale	(	double	a,
		double	b
	)

inline

Definition at line 70 of file MP_probe.hxx.

Referenced by Generation::calcFitness().

bool probe_combi_statistic::ok_for_next_gen ( int & len_roul_wheel )

Definition at line 40 of file MP_probe_combi_statistic.cxx.

References get_expected_children(), get_random(), is_dead(), and MULTROULETTEFACTOR.

void probe_combi_statistic::sub_life_counter ( )

inline

Definition at line 74 of file MP_probe.hxx.

Referenced by Generation::create_next_generation().

void probe_combi_statistic::init_life_counter ( )

Definition at line 55 of file MP_probe_combi_statistic.cxx.

References MAXLIFEFORCOMBI.

Referenced by Generation::create_next_generation().

bool probe_combi_statistic::is_dead ( )

inline

Definition at line 76 of file MP_probe.hxx.

Referenced by ok_for_next_gen().

void probe_combi_statistic::sigma_truncation	(	double	average_fit,
		double	dev
	)

Definition at line 201 of file MP_probe_combi_statistic.cxx.

References SIGMATRUNCATION_CONST.

double probe_combi_statistic::calc_fitness ( int len_of_field )

Definition at line 273 of file MP_probe_combi_statistic.cxx.

References ST_Container::Auswahlliste, ST_Container::Bakterienliste, Sondentopf::fill_Stat_Arrays(), FITNESSSCALEFACTOR, probe_tabs::get_group_tab(), probe_tabs::get_len_group_tabs(), probe_tabs::get_non_group_tab(), MP_Main::get_p_eval(), ProbeValuation::get_sondenarray(), MP_Main::get_stc(), mp_gl_awars, mp_main, awar_vars::no_of_probes, awar_vars::outside_mismatches_difference, Sondentopf::put_Sonde(), and awar_vars::qualityborder_best.

Referenced by Generation::calcFitness().

double probe_combi_statistic::calc_expected_children ( double average_fitness )

Definition at line 323 of file MP_probe_combi_statistic.cxx.

Referenced by Generation::calcFitness().

void probe_combi_statistic::mutate_Probe ( )

Definition at line 168 of file MP_probe_combi_statistic.cxx.

References check_duplicates(), MP_Main::get_p_eval(), ProbeValuation::get_pool_length(), ProbeValuation::get_probe_pool(), get_random(), init_stats(), mp_gl_awars, mp_main, MUTATION_WS, and awar_vars::no_of_probes.

Referenced by Generation::create_next_generation().

void probe_combi_statistic::crossover_Probes ( probe_combi_statistic * pcombi2 )

Definition at line 209 of file MP_probe_combi_statistic.cxx.

References check_duplicates(), get_random(), init_stats(), mp_gl_awars, awar_vars::no_of_probes, and swap().

Referenced by Generation::create_next_generation().

void probe_combi_statistic::swap	(	probe **	a,
		probe **	b
	)

inline

Definition at line 66 of file MP_probe_combi_statistic.cxx.

References help().

Referenced by crossover_Probes().

void probe_combi_statistic::sort ( long feld_laenge )

Definition at line 59 of file MP_probe_combi_statistic.cxx.

Referenced by check_duplicates().

probe_combi_statistic * probe_combi_statistic::duplicate ( )

Definition at line 159 of file MP_probe_combi_statistic.cxx.

References probe_tabs::duplicate(), NULp, and probe_combi_statistic().

Referenced by Generation::create_next_generation(), Generation::insert(), and ProbeValuation::insert_in_result_list().

probe_combi_statistic * probe_combi_statistic::check_duplicates ( GenerationDuplicates * dup_tree = NULp )

Definition at line 110 of file MP_probe_combi_statistic.cxx.

References GenerationDuplicates::insert(), mp_gl_awars, awar_vars::no_of_probes, NULp, result, and sort().

Referenced by crossover_Probes(), Generation::init_valuation(), and mutate_Probe().

int probe_combi_statistic::calc_index_system3 ( int * field )

Definition at line 259 of file MP_probe_combi_statistic.cxx.

References mp_gl_awars, awar_vars::no_of_probes, result, and system3_tab.

void probe_combi_statistic::print ( )

Definition at line 130 of file MP_probe_combi_statistic.cxx.

References mp_gl_awars, awar_vars::no_of_probes, and probe_tabs::print().

Referenced by print().

void probe_combi_statistic::print ( probe * p )

Definition at line 126 of file MP_probe_combi_statistic.cxx.

References probe::allowed_mismatches, and probe::probe_index.

void probe_combi_statistic::print	(	probe **	arr,
		int	length
	)

Definition at line 138 of file MP_probe_combi_statistic.cxx.

References length, and print().

The documentation for this class was generated from the following files:

MULTI_PROBE/MP_probe.hxx
MULTI_PROBE/MP_probe_combi_statistic.cxx