RealignAttempt Class Reference

Inheritance diagram for RealignAttempt:

Collaboration diagram for RealignAttempt:

Public Member Functions
	RealignAttempt (const TransTables &allowed_, const char *compressed_dna_, size_t compressed_len_, const char *aligned_protein_, char *target_dna_, size_t target_len_, bool cutoff_dna_)
const TransTables &	get_remaining_tables () const
const FailedAt &	failed () const

Detailed Description

Definition at line 483 of file TranslateRealign.cxx.

Constructor & Destructor Documentation

RealignAttempt::RealignAttempt ( const TransTables &  allowed_, const char *  compressed_dna_, size_t  compressed_len_, const char *  aligned_protein_, char *  target_dna_, size_t  target_len_, bool  cutoff_dna_  )

inline

Definition at line 496 of file TranslateRealign.cxx.

References ali_assert.

Member Function Documentation

const TransTables& RealignAttempt::get_remaining_tables ( ) const

inline

Definition at line 507 of file TranslateRealign.cxx.

Referenced by Realigner::realign_seq().

const FailedAt& RealignAttempt::failed ( ) const

inline

Definition at line 508 of file TranslateRealign.cxx.

Referenced by Realigner::realign_seq().

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The documentation for this class was generated from the following file:

• SL/ALILINK/TranslateRealign.cxx