SequenceBuffer Class Reference

#include <SequenceBuffer.h>

Inheritance diagram for SequenceBuffer:

Collaboration diagram for SequenceBuffer:

Public Member Functions
	SequenceBuffer (size_t expectedSize)
	~SequenceBuffer ()
void	addLine (const std::string &line)
const BaseCounter &	getBaseCounter () const
BaseCounter &	getBaseCounter ()
const char *	getSequence () const

Detailed Description

Definition at line 70 of file SequenceBuffer.h.

Constructor & Destructor Documentation

SequenceBuffer::SequenceBuffer ( size_t  expectedSize )

inline

Definition at line 76 of file SequenceBuffer.h.

References BaseCounter::startLineCounter().

SequenceBuffer::~SequenceBuffer

(

)

Definition at line 122 of file SequenceBuffer.cxx.

References seq.

Member Function Documentation

void SequenceBuffer::addLine ( const std::string &  line )

inline

Definition at line 85 of file SequenceBuffer.h.

References BaseCounter::addLine().

const BaseCounter& SequenceBuffer::getBaseCounter ( ) const

inline

Definition at line 90 of file SequenceBuffer.h.

Referenced by Importer::check_base_counters().

BaseCounter& SequenceBuffer::getBaseCounter ( )

inline

Definition at line 91 of file SequenceBuffer.h.

const char * SequenceBuffer::getSequence

(

)

const

Definition at line 126 of file SequenceBuffer.cxx.

References BC_ALL, gi_assert, and seq.

Referenced by DBwriter::writeSequence().

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The documentation for this class was generated from the following files:

• GENOM_IMPORT/SequenceBuffer.h
• GENOM_IMPORT/SequenceBuffer.cxx