PH_NEIGHBOURJOINING Class Reference

#include <NJ.hxx>

Inheritance diagram for PH_NEIGHBOURJOINING:

Collaboration diagram for PH_NEIGHBOURJOINING:

Public Member Functions
	PH_NEIGHBOURJOINING (const AP_smatrix &smatrix)
	~PH_NEIGHBOURJOINING ()
void	join_nodes (long i, long j, AP_FLOAT &leftl, AP_FLOAT &rightlen)
AP_FLOAT	get_min_ij (long &i, long &j)
void	get_last_ij (long &i, long &j)
AP_FLOAT	get_dist (long i, long j)

Detailed Description

Definition at line 50 of file NJ.hxx.

Constructor & Destructor Documentation

PH_NEIGHBOURJOINING::PH_NEIGHBOURJOINING

(

const AP_smatrix &

smatrix

)

Definition at line 91 of file NJ.cxx.

References ARB_calloc(), symmetric_matrix< T >::fast_get(), symmetric_matrix< T >::get_max_value(), PH_NEIGHBOUR_DIST::i, PH_NEIGHBOUR_DIST::j, symmetric_matrix< T >::size(), and PH_NEIGHBOUR_DIST::val.

PH_NEIGHBOURJOINING::~PH_NEIGHBOURJOINING

(

)

Definition at line 121 of file NJ.cxx.

Member Function Documentation

void PH_NEIGHBOURJOINING::join_nodes	(	long	i,
		long	j,
		AP_FLOAT &	leftl,
		AP_FLOAT &	rightlen
	)

Definition at line 161 of file NJ.cxx.

References get_dist(), and PH_NEIGHBOUR_DIST::val.

Referenced by neighbourjoining().

AP_FLOAT PH_NEIGHBOURJOINING::get_min_ij	(	long &	i,
		long &	j
	)

Definition at line 129 of file NJ.cxx.

References get_last_ij(), PH_NEIGHBOUR_DIST::i, PH_NEIGHBOUR_DIST::j, PH_NEIGHBOUR_DIST::next, and PH_NEIGHBOUR_DIST::val.

Referenced by neighbourjoining().

void PH_NEIGHBOURJOINING::get_last_ij	(	long &	i,
		long &	j
	)

Definition at line 195 of file NJ.cxx.

Referenced by get_min_ij(), and neighbourjoining().

AP_FLOAT PH_NEIGHBOURJOINING::get_dist	(	long	i,
		long	j
	)

Definition at line 200 of file NJ.cxx.

References PH_NEIGHBOUR_DIST::val.

Referenced by join_nodes(), and neighbourjoining().

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The documentation for this class was generated from the following files:

• SL/NEIGHBOURJOIN/NJ.hxx
• SL/NEIGHBOURJOIN/NJ.cxx