Public Member Functions | List of all members
AP_pos_var Class Reference

#include <AP_pos_var.h>

Inheritance diagram for AP_pos_var:
Inheritance graph
Collaboration diagram for AP_pos_var:
Collaboration graph

Public Member Functions

 AP_pos_var (GBDATA *gb_main_, const char *ali_name_, long ali_len_, bool is_nuc_, const char *tree_name_)
 ~AP_pos_var ()
GB_ERROR retrieve (TreeNode *tree)
GB_ERROR delete_aliEntry_from_SAI (const char *sai_name)
GB_ERROR save_aliEntry_to_SAI (const char *sai_name)

Detailed Description

Definition at line 25 of file AP_pos_var.h.

Constructor & Destructor Documentation

AP_pos_var::AP_pos_var ( GBDATA gb_main_,
const char ali_name_,
long  ali_len_,
bool  is_nuc_,
const char tree_name_ 

Definition at line 23 of file AP_pos_var.cxx.

References NULp.

AP_pos_var::~AP_pos_var ( )

Definition at line 43 of file AP_pos_var.cxx.

Member Function Documentation

GB_ERROR AP_pos_var::retrieve ( TreeNode tree)
GB_ERROR AP_pos_var::delete_aliEntry_from_SAI ( const char sai_name)

Definition at line 202 of file AP_pos_var.cxx.

References GB_delete(), GB_FIND, GB_search(), GBT_find_SAI(), and NULp.

Referenced by PVP_calculate().

GB_ERROR AP_pos_var::save_aliEntry_to_SAI ( const char sai_name)

The documentation for this class was generated from the following files: