GEN_root Class Reference

#include <GEN_gene.hxx>

Inheritance diagram for GEN_root:

Collaboration diagram for GEN_root:

Public Member Functions
	GEN_root (const char *organism_name_, const char *gene_name_, GBDATA *gb_main_, AW_root *aw_root, GEN_graphic *gen_graphic_)
	~GEN_root ()
const std::string &	GeneName () const
const std::string &	OrganismName () const
GBDATA *	GbMain () const
void	set_GeneName (const std::string &gene_name_)
void	paint (AW_device *device)
void	reinit_NDS () const
const AW::Rectangle &	get_selected_range () const

Detailed Description

Definition at line 84 of file GEN_gene.hxx.

Constructor & Destructor Documentation

GEN_root::GEN_root	(	const char *	organism_name_,
		const char *	gene_name_,
		GBDATA *	gb_main_,
		AW_root *	aw_root,
		GEN_graphic *	gen_graphic_
	)

Definition at line 165 of file GEN_gene.cxx.

References ARB_HIDDEN, ARB_strdup(), aw_message(), AW_root::awar(), AWAR_GENMAP_SHOW_HIDDEN, GB_await_error(), GB_entry(), gb_main, GB_read_byte(), GB_read_count(), GBS_global_string(), GBS_global_string_copy(), GBT_find_sequence(), GBT_find_species(), GEN_find_gene_data(), GEN_first_gene_rel_gene_data(), GEN_global_gene_identifier(), GEN_next_gene(), GENOM_ALIGNMENT, length, loadPositions4gene(), NULp, GEN_position::parts, AW_awar::read_int(), ta, and warning().

GEN_root::~GEN_root ( )

inline

Definition at line 113 of file GEN_gene.hxx.

Member Function Documentation

const std::string& GEN_root::GeneName ( ) const

inline

Definition at line 115 of file GEN_gene.hxx.

Referenced by GEN_graphic::reinit_gen_root().

const std::string& GEN_root::OrganismName ( ) const

inline

Definition at line 116 of file GEN_gene.hxx.

Referenced by GEN_graphic::reinit_gen_root().

GBDATA* GEN_root::GbMain ( ) const

inline

Definition at line 118 of file GEN_gene.hxx.

void GEN_root::set_GeneName ( const std::string &  gene_name_ )

inline

Definition at line 120 of file GEN_gene.hxx.

Referenced by GEN_graphic::reinit_gen_root().

void GEN_root::paint

(

AW_device *

device

)

Definition at line 180 of file GEN_graphic.cxx.

References AW_root::awar(), AWAR_GENMAP_ARROW_SIZE, AWAR_GENMAP_BOOK_BASES_PER_LINE, AWAR_GENMAP_BOOK_LINE_HEIGHT, AWAR_GENMAP_BOOK_LINE_SPACE, AWAR_GENMAP_BOOK_WIDTH_FACTOR, AWAR_GENMAP_RADIAL_INSIDE, AWAR_GENMAP_RADIAL_OUTSIDE, AWAR_GENMAP_SHOW_ALL_NDS, AWAR_GENMAP_VERTICAL_FACTOR_X, AWAR_GENMAP_VERTICAL_FACTOR_Y, GEN_DISPLAY_STYLE_BOOK, GEN_DISPLAY_STYLE_RADIAL, GEN_DISPLAY_STYLE_VERTICAL, GEN_GC_DEFAULT, GEN_graphic::get_aw_root(), GEN_graphic::get_display_style(), getDrawGcs(), M_PI, PAINT_MAX, PAINT_MIN, AW_awar::read_float(), AW_awar::read_int(), AW_device::text(), xi, and y.

Referenced by GEN_graphic::show().

void GEN_root::reinit_NDS

(

)

const

Definition at line 236 of file GEN_gene.cxx.

Referenced by reinit_NDS_4_window().

const AW::Rectangle& GEN_root::get_selected_range ( ) const

inline

Definition at line 126 of file GEN_gene.hxx.

Referenced by GEN_jump_cb().

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The documentation for this class was generated from the following files:

• GENOM/GEN_gene.hxx
• GENOM/GEN_gene.cxx
• GENOM/GEN_graphic.cxx