PARSIMONY_testenv< SEQTYPE > Class Template Reference

#include <test_env.h>

Inheritance diagram for PARSIMONY_testenv< SEQTYPE >:

Collaboration diagram for PARSIMONY_testenv< SEQTYPE >:

Public Member Functions
	PARSIMONY_testenv (const char *dbname)
	PARSIMONY_testenv (const char *dbname, const char *aliName)
	~PARSIMONY_testenv ()
AP_tree_nlen *	root_node ()
AP_pars_root *	tree_root ()
GB_ERROR	load_tree (const char *tree_name)
void	push ()
void	push_whole_tree ()
void	pop ()
void	accept ()
void	accept_if (bool cond)
Validity	pop_will_produce_valid_tree ()
Validity	all_available_pops_will_produce_valid_trees ()
Level	get_frame_level ()
Level	get_user_push_counter ()
AWT_graphic_parsimony *	graphic_tree ()
GBDATA *	gbmain () const
long	combines_performed ()
void	compute_tree ()
KL_Settings &	get_KL_settings ()

Detailed Description

template<typename SEQTYPE>
class PARSIMONY_testenv< SEQTYPE >

Definition at line 45 of file test_env.h.

Constructor & Destructor Documentation

template<typename SEQTYPE>

PARSIMONY_testenv< SEQTYPE >::PARSIMONY_testenv ( const char *  dbname )

inline

Definition at line 66 of file test_env.h.

References ap_main, and AP_main::get_gb_main().

template<typename SEQTYPE>

PARSIMONY_testenv< SEQTYPE >::PARSIMONY_testenv	(	const char *	dbname,
		const char *	aliName
	)

template<typename SEQTYPE>

PARSIMONY_testenv< SEQTYPE >::~PARSIMONY_testenv ( )

inline

Definition at line 74 of file test_env.h.

References ap_assert, ap_main, AP_combinableSeq::combine_count(), AP_tree_edge::destroy(), NULp, PARSIMONY_testenv< SEQTYPE >::root_node(), and TEST_EXPECT_EQUAL.

Member Function Documentation

template<typename SEQTYPE>

AP_tree_nlen* PARSIMONY_testenv< SEQTYPE >::root_node ( )

inline

Definition at line 88 of file test_env.h.

References ap_assert, and PARSIMONY_testenv< SEQTYPE >::graphic_tree().

Referenced by PARSIMONY_testenv< SEQTYPE >::compute_tree(), PARSIMONY_testenv< SEQTYPE >::load_tree(), and PARSIMONY_testenv< SEQTYPE >::~PARSIMONY_testenv().

template<typename SEQTYPE>

AP_pars_root* PARSIMONY_testenv< SEQTYPE >::tree_root ( )

inline

Definition at line 93 of file test_env.h.

template<typename SEQTYPE>

GB_ERROR PARSIMONY_testenv< SEQTYPE >::load_tree ( const char *  tree_name )

inline

Definition at line 95 of file test_env.h.

References ap_assert, ap_main, ASSERT_VALID_TREE, error(), gb_main, AP_main::get_gb_main(), AP_tree_edge::initialize(), PARSIMONY_testenv< SEQTYPE >::root_node(), rootEdge(), rootNode(), and ta.

template<typename SEQTYPE>

void PARSIMONY_testenv< SEQTYPE >::push ( )

inline

Definition at line 111 of file test_env.h.

References AP_main::remember().

template<typename SEQTYPE>

void PARSIMONY_testenv< SEQTYPE >::push_whole_tree ( )

inline

Definition at line 112 of file test_env.h.

template<typename SEQTYPE>

void PARSIMONY_testenv< SEQTYPE >::pop ( )

inline

Definition at line 113 of file test_env.h.

References AP_main::revert().

template<typename SEQTYPE>

void PARSIMONY_testenv< SEQTYPE >::accept ( )

inline

Definition at line 114 of file test_env.h.

References AP_main::accept().

template<typename SEQTYPE>

void PARSIMONY_testenv< SEQTYPE >::accept_if ( bool  cond )

inline

Definition at line 115 of file test_env.h.

References AP_main::accept_if().

template<typename SEQTYPE>

Validity PARSIMONY_testenv< SEQTYPE >::pop_will_produce_valid_tree ( )

inline

Definition at line 118 of file test_env.h.

References AP_main::revert_will_produce_valid_tree().

template<typename SEQTYPE>

Validity PARSIMONY_testenv< SEQTYPE >::all_available_pops_will_produce_valid_trees ( )

inline

Definition at line 119 of file test_env.h.

References AP_main::all_available_reverts_will_produce_valid_trees().

template<typename SEQTYPE>

Level PARSIMONY_testenv< SEQTYPE >::get_frame_level ( )

inline

Definition at line 122 of file test_env.h.

References AP_main::get_frameLevel().

template<typename SEQTYPE>

Level PARSIMONY_testenv< SEQTYPE >::get_user_push_counter ( )

inline

Definition at line 123 of file test_env.h.

References AP_main::get_user_push_counter().

template<typename SEQTYPE>

AWT_graphic_parsimony* PARSIMONY_testenv< SEQTYPE >::graphic_tree ( )

inline

Definition at line 125 of file test_env.h.

Referenced by PARSIMONY_testenv< SEQTYPE >::root_node().

template<typename SEQTYPE>

GBDATA* PARSIMONY_testenv< SEQTYPE >::gbmain ( ) const

inline

Definition at line 127 of file test_env.h.

References AP_main::get_gb_main().

template<typename SEQTYPE>

long PARSIMONY_testenv< SEQTYPE >::combines_performed ( )

inline

Definition at line 129 of file test_env.h.

References AP_combinableSeq::combine_count().

template<typename SEQTYPE>

void PARSIMONY_testenv< SEQTYPE >::compute_tree ( )

inline

Definition at line 135 of file test_env.h.

References PARSIMONY_testenv< SEQTYPE >::root_node().

template<typename SEQTYPE>

KL_Settings& PARSIMONY_testenv< SEQTYPE >::get_KL_settings ( )

inline

Definition at line 137 of file test_env.h.

References ap_assert.

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The documentation for this class was generated from the following file:

• PARSIMONY/test_env.h