Public Member Functions | Public Attributes | List of all members
NA_Alignment Struct Reference

#include <GDE_def.h>

Inheritance diagram for NA_Alignment:
Inheritance graph
Collaboration diagram for NA_Alignment:
Collaboration graph

Public Member Functions

 NA_Alignment (GBDATA *gb_main_)
 ~NA_Alignment ()
- Public Member Functions inherited from Noncopyable
 Noncopyable ()

Public Attributes

size_t numelements
int maxnumelements
int maxlen
int rel_offset
size_t numgroups
NA_Sequence ** group
int format
GB_alignment_type alignment_type

Detailed Description

Definition at line 116 of file GDE_def.h.

Constructor & Destructor Documentation

NA_Alignment::NA_Alignment ( GBDATA gb_main_)
NA_Alignment::~NA_Alignment ( )

Definition at line 222 of file GDE_event.cxx.

References alignment_name, authority, description, element, GDE_freesequ(), and numelements.

Member Data Documentation

char* NA_Alignment::id

Definition at line 117 of file GDE_def.h.

char* NA_Alignment::description

Definition at line 118 of file GDE_def.h.

Referenced by ~NA_Alignment().

char* NA_Alignment::authority

Definition at line 119 of file GDE_def.h.

Referenced by ~NA_Alignment().

size_t NA_Alignment::numelements
int NA_Alignment::maxnumelements

Definition at line 121 of file GDE_def.h.

Referenced by Arbdb_get_curelem().

int NA_Alignment::maxlen

Definition at line 122 of file GDE_def.h.

Referenced by InsertDatainGDE(), NormalizeOffset(), ReadGen(), and ReadNA_Flat().

int NA_Alignment::rel_offset

Definition at line 123 of file GDE_def.h.

Referenced by NormalizeOffset(), WriteGDE(), and WriteNA_Flat().

NA_Sequence* NA_Alignment::element
size_t NA_Alignment::numgroups

Definition at line 125 of file GDE_def.h.

Referenced by Regroup().

NA_Sequence** NA_Alignment::group

Definition at line 126 of file GDE_def.h.

int NA_Alignment::format

Definition at line 127 of file GDE_def.h.

Referenced by LoadFile().

GBDATA* NA_Alignment::gb_main

Definition at line 129 of file GDE_def.h.

Referenced by GDE_startaction_cb(), InsertDatainGDE(), NA_Alignment(), and ReadArbdb().

char* NA_Alignment::alignment_name

Definition at line 130 of file GDE_def.h.

Referenced by export_to_DB(), InsertDatainGDE(), NA_Alignment(), ReadArbdb(), and ~NA_Alignment().

GB_alignment_type NA_Alignment::alignment_type

Definition at line 131 of file GDE_def.h.

Referenced by export_to_DB(), and NA_Alignment().

The documentation for this struct was generated from the following files: