ProbeValuation Class Reference

#include <MP_probe.hxx>

Inheritance diagram for ProbeValuation:

Collaboration diagram for ProbeValuation:

Public Member Functions
void	set_act_gen (Generation *g)
int	get_max_init_for_gen ()
int	get_pool_length ()
probe **	get_probe_pool ()
int	get_size_sondenarray ()
char **	get_sondenarray ()
void	insert_in_result_list (probe_combi_statistic *pcs)
void	init_valuation ()
void	evolution ()
	ProbeValuation (char **sonden_array, int no_of_sonden, int *bewertung, int *single_mismatch)
	~ProbeValuation ()

Detailed Description

Definition at line 154 of file MP_probe.hxx.

Constructor & Destructor Documentation

ProbeValuation::ProbeValuation	(	char **	sonden_array,
		int	no_of_sonden,
		int *	bewertung,
		int *	single_mismatch
	)

Definition at line 232 of file MP_probe.cxx.

References k_chosenFrom_n(), MAXINITPOPULATION, mp_gl_awars, and awar_vars::no_of_probes.

ProbeValuation::~ProbeValuation

(

)

Definition at line 259 of file MP_probe.cxx.

References List< Type >::get_first(), List< Type >::remove_first(), and result_struct::view_string.

Member Function Documentation

void ProbeValuation::set_act_gen ( Generation *  g )

inline

Definition at line 171 of file MP_probe.hxx.

Referenced by MP_Main::new_probe_eval().

int ProbeValuation::get_max_init_for_gen ( )

inline

Definition at line 172 of file MP_probe.hxx.

Referenced by MP_Main::new_probe_eval().

int ProbeValuation::get_pool_length ( )

inline

Definition at line 173 of file MP_probe.hxx.

Referenced by Generation::gen_determ_combis(), Generation::init_valuation(), and probe_combi_statistic::mutate_Probe().

probe** ProbeValuation::get_probe_pool ( )

inline

Definition at line 174 of file MP_probe.hxx.

Referenced by Generation::gen_determ_combis(), Generation::init_valuation(), and probe_combi_statistic::mutate_Probe().

int ProbeValuation::get_size_sondenarray ( )

inline

Definition at line 175 of file MP_probe.hxx.

Referenced by Generation::Generation().

char** ProbeValuation::get_sondenarray ( )

inline

Definition at line 176 of file MP_probe.hxx.

Referenced by probe_combi_statistic::calc_fitness().

void ProbeValuation::insert_in_result_list

(

probe_combi_statistic *

pcs

)

Definition at line 69 of file MP_probe.cxx.

References probe::allowed_mismatches, AW_selection_list::clear(), probe_combi_statistic::duplicate(), probe::e_coli_pos, List< Type >::get_first(), probe_combi_statistic::get_fitness(), List< Type >::get_next(), probe_combi_statistic::get_probe_combi(), AW_selection_list::insert(), List< Type >::insert_as_first(), List< Type >::insert_as_last(), List< Type >::insert_before_current(), AW_selection_list::insert_default(), mp_gl_awars, awar_vars::no_of_probes, probe::probe_index, result_struct::ps, result_probes_list, SEPARATOR, AW_selection_list::update(), and result_struct::view_string.

Referenced by Generation::check_for_results().

void ProbeValuation::init_valuation

(

)

Definition at line 164 of file MP_probe.cxx.

References probe::allowed_mismatches, probe::e_coli_pos, evolution(), MP_Main::get_mp_window(), MP_Window::get_result_window(), MP_Main::get_stc(), AW_scalar::get_string(), AW_selection_list_iterator::get_value(), Generation::init_valuation(), MAXINITPOPULATION, MAXSONDENHASHSIZE, MP_get_comment(), mp_main, new_pt_server, NULp, probe::probe_index, pt_server_different, selected_list, and MP_Main::set_stc().

Referenced by MP_compute().

void ProbeValuation::evolution

(

)

Definition at line 22 of file MP_probe.cxx.

References arb_progress::aborted(), aw_message(), Generation::calcFitness(), Generation::check_for_results(), Generation::create_next_generation(), arb_progress::done(), Generation::get_avg_fit(), Generation::get_generation(), arb_progress::inc(), k_chosenFrom_n(), MAXINITPOPULATION, MAXPOPULATION, MP_aborted(), mp_gl_awars, awar_vars::no_of_probes, and NULp.

Referenced by init_valuation().

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The documentation for this class was generated from the following files:

• MULTI_PROBE/MP_probe.hxx
• MULTI_PROBE/MP_probe.cxx