Here is a list of all file members with links to the files they belong to:

- m -

M : mem.cxx
M_PI : RNA3D_Global.hxx
ma_assert : recmac.hxx , trackers.hxx , macro_gui.cxx
MacInit() : macinit.c
MACKE : fun.h
macke_abbrev() : macke.cxx
macke_continue_line() : macke.cxx
macke_is_genbank_entry_comment() : macke.cxx
macke_key_word() : macke.cxx , prototypes.h
macke_one_entry_in() : macke.cxx
macke_origin() : macke.cxx , prototypes.h
macke_out_header() : macke.cxx , prototypes.h
macke_print_keyword_rem() : macke.cxx
macke_print_line() : macke.cxx
macke_print_prefixed_line() : macke.cxx
macke_print_prefixed_line_if_content() : macke.cxx
macke_read_seq() : macke.cxx
macke_seq_data_out() : macke.cxx , prototypes.h
macke_seq_display_out() : macke.cxx , prototypes.h
macke_seq_info_out() : macke.cxx , prototypes.h
macke_to_gcg() : gcg.cxx
MACKELIMIT : macke.cxx
MACKEMAXLINE : defs.h
macro_execution_finished() : macro_gui.cxx
MACRO_INTERRUPT_ID : macros_local.hxx
macro_name : mkptypes.cxx
MACRO_PLAYBACK_ID : macros_local.hxx
MACRO_PLAYBACK_MARKED_ID : macros_local.hxx
MACRO_RECORD_ID : macros_local.hxx
macro_recording_changed_cb() : macro_gui.cxx
macro_terminated() : trackers.cxx
MACRO_TRIGGER_CONTAINER : arbdbt.h
MACRO_TRIGGER_ERROR : arbdbt.h
MACRO_TRIGGER_RECORDING : arbdbt.h
MACRO_TRIGGER_TERMINATED : arbdbt.h
MACRO_TRIGGER_TRACKED : arbdbt.h
MACRO_WINDOW_ID : macros_local.hxx
main() : nostd.cxx , arb_calc_pvp.cxx , arb_export_newick.cxx , arb_export_seq_filtered.cxx , arb_export_sequences.cxx , arb_export_tree.cxx , arb_read_tree.cxx , arb_write_tree_comment.cxx , TestEnvironment.cxx , aisc.c , i-hopper.cxx , perlmain_source.c , ps_arb2asciipaths.cxx , ps_convert_db.cxx , ps_detect_weak_differences.cxx , ps_eval_candidates.cxx , ps_find_probes.cxx , ps_get_probes.cxx , ps_make_sample_db.cxx , ps_merge_my_dbs.cxx , ps_my2ascii.cxx , ps_my2asciipaths.cxx , ps_show_result.cxx , macinit.c , readseq.c , arb_main.cxx , c0x.cxx
MAIN_ADMIN : AliAdmin.h
main_manager_spec : ED4_manager.cxx
maintain_timer_callback : AW_inotify.cxx
Make : defs.h
make_alnum() : names.cxx
make_alpha() : names.cxx
make_async_call() : servercntrl.cxx
MAKE_CLONABLE : test_unit.h
make_counter() : arb_progress.cxx
make_limit_string() : field_shader.cxx
make_macro_recording_tracker() : trackers.cxx
make_pamo() : ClustalV.cxx
make_PT_family_list() : PT_family.cxx
make_valgrinded_call : ut_valgrinded.h
makeAliData() : insdel.cxx
makeAliSeqData() : insdel.cxx
makeEdge() : ap_main.hxx
makeFromConfigRule() : saiop.cxx
makeHelpCallback() : aw_window.hxx
MakeInteger : defs.h
makeItemFieldShader() : field_shader.cxx , field_shader.h
MakeList : defs.h
MAKEREL() : admap.cxx
makeSymPart() : mkptypes.cxx
makeTitle() : ColumnStat_2_gnuplot.cxx
makeUniqueShortName() : AW_rename.cxx
makeUserRates() : arb_dnarates.cxx
makevalues() : arb_dnarates.cxx
makeweights() : arb_dnarates.cxx
MAN_LINES : arb_a2ps.c
MANAGED_CONFIGSET_ENTRY : NT_edconf.cxx
MANAGED_CONFIGSET_SECTION : NT_edconf.cxx
manyout : readseq.c
MAP_ARAM : aw_window_Xm.hxx
map_awXKey() : AW_xkey.cxx
map_extended() : MG_extendeds.cxx
map_item_cb() : info_window.cxx
map_SAI_to_scanner() : ad_ext.cxx
MAP_SAI_TO_STRUCTURE : RNA3D_StructureData.hxx
MAP_SEARCH_STRINGS_BACKBONE : RNA3D_StructureData.hxx
MAP_SEARCH_STRINGS_TO_STRUCTURE : RNA3D_StructureData.hxx
MAP_SPECIES_BASE_A : RNA3D_StructureData.hxx
MAP_SPECIES_BASE_C : RNA3D_StructureData.hxx
MAP_SPECIES_BASE_DIFFERENCE : RNA3D_StructureData.hxx
MAP_SPECIES_BASE_DIFFERENCE_POS : RNA3D_StructureData.hxx
MAP_SPECIES_BASE_DIFFERENCE_POS_ANCHOR : RNA3D_StructureData.hxx
MAP_SPECIES_BASE_G : RNA3D_StructureData.hxx
MAP_SPECIES_BASE_U : RNA3D_StructureData.hxx
MAP_SPECIES_DELETION : RNA3D_StructureData.hxx
MAP_SPECIES_INSERTION_BASES : RNA3D_StructureData.hxx
MAP_SPECIES_INSERTION_BASES_ANCHOR : RNA3D_StructureData.hxx
MAP_SPECIES_INSERTION_POINTS : RNA3D_StructureData.hxx
MAP_SPECIES_MISSING : RNA3D_StructureData.hxx
map_viewkey() : nds.cxx
map_viewkeys() : nds.cxx
MapDisplayParameters() : RNA3D_OpenGLEngine.cxx , RNA3D_OpenGLEngine.hxx
MapMatrixType : Cma.h
MAPPED_KEYS : AWT_map_key.cxx , AW_xkey.cxx
mappedFiles : admap.cxx
mappedKeys : AW_xkey.cxx
mapping_awar_name() : AWT_map_key.cxx
MapSaiToEcoliTemplateChanged_CB() : RNA3D_OpenGLEngine.cxx , RNA3D_OpenGLEngine.hxx
MapSearchStringsToEcoliTemplateChanged_CB() : RNA3D_OpenGLEngine.cxx , RNA3D_OpenGLEngine.hxx
MapSelectedSpeciesChanged_CB() : RNA3D_OpenGLEngine.cxx , RNA3D_OpenGLEngine.hxx
mapTree() : NT_taxonomy.cxx
MapVecType : Cma.h
MARGIN : arb_a2ps.c
MARK : GEN_map.cxx , NT_taxonomy.cxx , db_query.cxx
mark_action() : NT_taxonomy.cxx
mark_as_macro_executor() : adtools.cxx
mark_cluster() : DI_clusters.cxx
mark_clusters() : DI_clusters.cxx
mark_colored_cb() : db_query.cxx
mark_deep_leafs_automark_cb() : NT_branchAnalysis.cxx
mark_deep_leafs_cb() : NT_branchAnalysis.cxx
mark_degenerated_branches_automark_cb() : NT_branchAnalysis.cxx
mark_degenerated_branches_cb() : NT_branchAnalysis.cxx
MARK_EXTENSION_FLAG_DEFAULT : ali_global.cxx
MARK_FAMILY_FLAG_DEFAULT : ali_global.cxx
mark_gene_species() : GEN_map.cxx
mark_gene_species_of_marked_genes() : GEN_map.cxx
mark_gene_species_using_current_alignment() : GEN_map.cxx
mark_genes_of_marked_gene_species() : GEN_map.cxx
mark_long_branches_automark_cb() : NT_branchAnalysis.cxx
mark_long_branches_cb() : NT_branchAnalysis.cxx
mark_mode : db_query.cxx
MARK_MODE_LOWER_BITS : TreeCallbacks.cxx
MARK_MODE_UPPER_BITS : TreeCallbacks.cxx
MARK_NONFINAL__INTERNAL : cxxforward.h
MARK_NONFINAL_CLASS : cxxforward.h , reader.h , arb_strarray.h , BufferedFileReader.h , ed4_class.hxx , AP_Tree.hxx , ARB_Tree.hxx , TreeDisplay.hxx , aw_window.hxx
MARK_NONFINAL_DTOR : cxxforward.h , reader.h
MARK_NONFINAL_FUNCTION : cxxforward.h , BufferedFileReader.h , ed4_class.hxx , AP_Tree.hxx , ARB_Tree.hxx , TreeDisplay.hxx
MARK_NONFINAL_METHOD : cxxforward.h , TreeNode.h , ed4_class.hxx , AP_Tree.hxx , aw_device.hxx
mark_nontree_cb() : TreeCallbacks.cxx
mark_organisms() : GEN_map.cxx
mark_organisms_with_marked_genes() : GEN_map.cxx
mark_pipe_broken() : AW_status.cxx
mark_queried_cb() : db_query.cxx
mark_referred_species() : NT_extern.cxx
mark_species() : NT_edconf.cxx
mark_tree_cb() : TreeCallbacks.cxx
MARK_UNMARK_REST : GEN_map.cxx
MarkCommand : GEN_map.cxx
MARKER_COLORS : TreeDisplay.cxx
MarkerGC : TreeDisplay.cxx
markerThresholdChanged_cb() : TreeDisplay.cxx
MASK : GDE_def.h
mask_command : AWT_input_mask.cxx
MASK_COMMANDS : AWT_input_mask.cxx
MaskCommand : AWT_input_mask.cxx
MASTER_GAP_EXTEND : ClustalV.cxx
master_gap_extend() : ClustalV.cxx
MASTER_GAP_OPEN : ClustalV.cxx
master_gap_open() : ClustalV.cxx
master_gapAt() : ClustalV.cxx
master_gapAtWithOpenPenalty() : ClustalV.cxx
match_changed_cb() : probe_design.cxx
MATCH_COMMAND : AWTI_import.cxx
match_string() : PT_match.cxx , pt_prototypes.h
MATCHABLE_ARGS_TYPED : test_unit.h
MATCHABLE_ARGS_UNTYPED : test_unit.h
MATCHANSWER : probe.h
MATCHES_MIN_DEFAULT : ali_global.cxx
matchesSymPart() : mkptypes.cxx
matchesUsingWildcard() : ED4_block.cxx
matchingParen() : mkptypes.cxx
matptr : ClustalV.cxx
MATRIX_AWARS : saicalc.cxx
matrix_changed_cb() : DI_matr.cxx
matrix_config_changed_cb() : saicalc.cxx
matrix_gui_changed_cb() : saicalc.cxx
matrix_halfsize() : AP_matrix.hxx
matrix_needs_recalc_cb() : DI_matr.cxx
MATRIX_RULES : saicalc.cxx
matrixConfigMapping : DI_view_matrix.cxx
matrixDisplay : DI_matr.cxx
max() : seq_search.hxx , aw_rgb.hxx , f2c.h , ureadseq.h , aisc.c , global.h
MAX_AISC_SET_GET : client_privat.h
MAX_ALLOWED_ENUM : arb_help2xml.cxx
MAX_AMBIGUITY_CODES : chartable.h
MAX_AWARNAME_LENGTH : ED4_flags.cxx , NT_sync_scroll.cxx
MAX_BACKTRACE : arb_backtrace.h
MAX_BASES_TABLES : chartable.cxx
MAX_BASETYPES : ClustalV.cxx
max_breaker_value : ED4_protein_2nd_structure.cxx
MAX_BROTHERS : adoptimize.cxx
MAX_CODON_LIST_LENGTH : AP_codon_table.cxx
MAX_COMMENT_LINES : AWTI_import.cxx
MAX_COMMENT_SIZE : mkptypes.cxx
MAX_COMPR_WORD_LEN : adoptimize.cxx
MAX_COST_OF_HELIX : ali_global.cxx
MAX_COST_OF_SUB_PERCENT_DEFAULT : ali_global.cxx
MAX_CRITERIA : NT_group_search.cxx , db_query.cxx
MAX_DIFFER : adoptimize.cxx
MAX_DROPPED_GROUP_WARN : TreeRead.cxx
MAX_EMBL_TRANSL_TABLE_VALUE : AP_codon_table.cxx
MAX_EQUAL_WARNINGS : MG_gene_species.cxx
MAX_ERROR : DNAml_rates_1_0.h
MAX_EXEC_MS_ENV : UnitTester.hxx
MAX_EXEC_MS_NORMAL : UnitTester.hxx
MAX_EXEC_MS_SLOW : UnitTester.hxx
MAX_EXEC_MS_VGSYS : UnitTester.hxx
MAX_FAMILY_SIZE_DEFAULT : ali_global.cxx
MAX_FONTSIZE : aw_def.hxx
max_former_value : ED4_protein_2nd_structure.cxx
MAX_GAP_EXTEND_DISCOUNT : ClustalV.cxx
MAX_GAP_OPEN_DISCOUNT : ClustalV.cxx
MAX_GLOBAL_AWARS : AW_global_awars.cxx
MAX_GNAME_LEN : PT_main.cxx
MAX_GROUPS : adlang1.cxx
MAX_HOSTNAME : arb_a2ps.c
MAX_INAME_LEN : PT_main.cxx
MAX_INDEX_TABLES : chartable.h
max_kb_for_passes() : PT_partition.h
MAX_LINE_LENGTH : arb_help2xml.cxx , AW_button.cxx
MAX_LINE_WIDTH : aw_xfig.hxx
MAX_LINES : arb_a2ps.c
MAX_LIST_PART_SIZE : PT_etc.cxx
MAX_LONG : PRD_Globals.hxx
MAX_LONG_INDEX : adoptimize.cxx
MAX_LONGLEN : adoptimize.cxx
MAX_MISMATCHES : ed4_search.hxx
MAX_MIXED : iupac.cxx
MAX_NAME_LEN : aditem.cxx
MAX_NT_WINDOWS : NT_local.h
MAX_NT_WINDOWS_NULLINIT : NT_local.h
MAX_NUMBER : adseqcompr.cxx
MAX_NUMBER_OF_MAPS_ALIGNER_DEFAULT : ali_global.cxx
MAX_NUMBER_OF_MAPS_DEFAULT : ali_global.cxx
MAX_ONAME_LEN : PT_main.cxx
MAX_POSSIBLE_SEQ_LENGTH : ed4_defs.hxx
MAX_POSSIBLE_SPECIFIED_OBJECT_TYPES : ED4_objspec.cxx
MAX_PRINT_LEN : gb_aci.cxx
max_probes_for_passes() : PT_partition.h
MAX_QUERY_LIST_LEN : db_query.cxx
MAX_QUEUE_LEN : server.c , adcomm.cxx
MAX_REGS : arb_diff.cxx
MAX_REMOTE_APP_LEN : ad_remote.h
MAX_REMOTE_ITEM_LEN : ad_remote.h
MAX_REMOTE_PATH_LEN : ad_remote.h
MAX_SEC_WIDTH : AW_status.cxx
MAX_SEC_WIDTH_STR : AW_status.cxx
MAX_SECONDS_PER_ROW : arb_handlers.cxx
max_seq_terminal_length : ed4_defs.hxx , ED4_main.cxx
MAX_SEQUENCE_PER_MASTER : adseqcompr.cxx
MAX_SHORT_INDEX : adoptimize.cxx
MAX_SHORTLEN : adoptimize.cxx
MAX_SHOWN_DATA_SIZE : query_expr.h
MAX_SHOWN_MISSING_SPECIES : ed4_defs.hxx
MAX_SIZE_IN_FLAGS : PT_prefixtree.cxx
MAX_SPECIES_FLAGS : ED4_flags.cxx
MAX_TARGET_INDICES : chartable.h
MAX_TEXTFIELD_SIZE : AWT_input_mask.cxx
MAX_TREEDISP_RECURSION_DEPTH : TreeDisplay.hxx
MAX_TRIPLES : seq_search.hxx
MAX_TRY : names.h , PT_main.cxx
MAX_USED_BASES_TABLES : chartable.h
MAX_WORD_LEN : adoptimize.cxx
MAX_XFIG_LENGTH : aw_xfig.hxx
maxAllowedInsertions() : PARS_main.cxx
MAXBASECHAR : base.h
MAXBUTTONSPERLINE : AW_modal.cxx
maxcategories : DNAml_rates_1_0.h
MAXCHARTABLE : chartable.h
maxCompressionSteps() : adseqcompr.cxx
MAXCONFIGLINESIZE : config_parser.h
maxDepth : rns.c
MAXDIST : align.cxx
MAXEDGE : trnsprob.h
MAXERRLEN : defines.c
MAXFILENAME : arb_a2ps.c
MAXGAP : align.cxx
MAXHEIGHT : arb_handlers.cxx
MAXINFO_WIDTH : ed4_defs.hxx , ED4_main.cxx
MAXINITPOPULATION : MultiProbe.hxx
MAXIUPAC : ED4_cursor.cxx
MAXLEN : readcfg.c
MAXLENtooSmall() : ClustalV.cxx
MAXLIFEFORCOMBI : MP_probe.hxx
MAXLINELEN : adtcp.cxx
MAXLINES : ED4_cursor.cxx
MAXMISMATCHES : MultiProbe.hxx
MAXN : ClustalV.cxx
MAXNAME_WIDTH : ed4_defs.hxx , ED4_main.cxx
MAXNAMELEN : ED4_terminal.cxx , NT_main.cxx
MAXNODES : DNAml_rates_1_0.h
MAXPARAM : mkptypes.cxx
maxpatterns : DNAml_rates_1_0.h
MAXPOINTS : ED4_cursor.cxx
MAXPOPULATION : MultiProbe.hxx
MAXPROBECOMBIS : MultiProbe.hxx
MAXS : macinit.c
MAXSEQUENCECHARACTERLENGTH : ed4_defs.hxx , ED4_main.cxx
maxsites : DNAml_rates_1_0.h
MAXSONDENHASHSIZE : MultiProbe.hxx
maxsp : DNAml_rates_1_0.h
MaxTextureSize : glpng.c
MAXTOKENS : adtcp.cxx
MAXWINDOWS : ed4_defs.hxx
Mb : UnitTester.cxx
MB : adtune.cxx
md : server.c
MEM : PT_main.cxx , PT_mem.h
member_of_DB() : AW_awar.cxx
memcpy3() : Translate.cxx
memman : admalloc.cxx
memory_is_equal : test_unit.h
MEMORY_TEST : gb_memory.h
memstr() : adoptimize.cxx
menu : GDE.cxx , GDE_extglob.h
MenuHighlightType : ED4_root.cxx
MERGE : NT_main.cxx
MERGE_create_all_awars() : MG_main.cxx , mg_merge.hxx
MERGE_create_db_file_awars() : MG_main.cxx , mg_merge.hxx
MERGE_create_main_window() : MG_main.cxx , mg_merge.hxx
merge_from_cb() : NT_extern.cxx
merge_from_to() : NT_extern.cxx
merge_into_cb() : NT_extern.cxx
MERGE_sequences_simple() : MG_species.cxx , mg_merge.hxx
MERGE_SPECIES_AND_CONCAT_ALI : NT_concatenate.cxx
MERGE_SPECIES_SIMPLE : NT_concatenate.cxx
merge_startup_abort_cb() : NT_main.cxx
merge_startup_error_window() : NT_main.cxx
merge_tool_running_as_client : NT_main.cxx
mergeKnownFields() : xfergui.cxx
mergeSimilarSpecies() : NT_concatenate.cxx
MergeSpeciesType : NT_concatenate.cxx
mergeToKnownFields() : xfergui.cxx
message() : ali_main.cxx
MESSAGE_BUFFERSIZE : seq_search.cxx
message_cb() : AW_modal.cxx , aw_window_Xm.hxx
MET : AP_seq_simple_pro.hxx
MetaTagMap : MetaTag.h
MetaTagType : MetaTag.h
MG_aci_changed_cb() : MG_gene_species.cxx
MG_adaptAllCopiedAlignments() : MG_adapt_ali.cxx , MG_adapt_ali.hxx
mg_assert : merge.hxx
mg_check_field_cb() : MG_checkfield.cxx
MG_config_delete_cb() : MG_configs.cxx
MG_copy_and_check_alignments() : MG_alignment.cxx , merge.hxx
mg_count_queried() : merge.hxx , MG_checkfield.cxx
MG_create_config_awar() : MG_configs.cxx , merge.hxx
MG_CREATE_COPY_GENE : MG_gene_species.cxx
MG_CREATE_COPY_ORGANISM : MG_gene_species.cxx
MG_create_current_field_content() : MG_gene_species.cxx
MG_create_db_dependent_awars() : MG_main.cxx
MG_create_db_dependent_rename_awars() : merge.hxx , MG_names.cxx
MG_create_extendeds_awars() : merge.hxx , MG_extendeds.cxx
MG_create_field_content() : MG_gene_species.cxx
MG_create_gene_species_awars() : merge.hxx , MG_gene_species.cxx
MG_create_merge_alignment_window() : merge.hxx , MG_alignment.cxx
MG_create_merge_configs_window() : merge.hxx , MG_configs.cxx
MG_create_merge_names_window() : merge.hxx , MG_names.cxx
MG_create_merge_SAIs_window() : merge.hxx , MG_extendeds.cxx
MG_create_merge_species_window() : merge.hxx , MG_species.cxx
MG_create_merge_trees_window() : merge.hxx , MG_trees.cxx
MG_create_preserves_selection_window() : merge.hxx , MG_preserves.cxx
MG_create_remap() : MG_adapt_ali.cxx
MG_create_rename_awars() : MG_names.cxx , merge.hxx
MG_create_save_as_window() : MG_main.cxx
MG_create_species_awars() : merge.hxx , MG_species.cxx
MG_create_trees_awar() : merge.hxx , MG_trees.cxx
MG_CREATE_USING_ACI_ONLY : MG_gene_species.cxx
MG_current_field_def_changed_cb() : MG_gene_species.cxx
MG_delete_selected_field_def() : MG_gene_species.cxx
MG_dest_field_changed_cb() : MG_gene_species.cxx
MG_diff_strings() : MG_checkfield.cxx
MG_equal_alignments() : MG_species.cxx
MG_exit() : MG_main.cxx
MG_exit_cb : MG_main.cxx
MG_expect_renamed() : merge.hxx , MG_names.cxx
MG_export_fields() : merge.hxx , MG_gene_species.cxx
MG_extended_delete_cb() : MG_extendeds.cxx
MG_gene_species_create_field_transfer_def_window() : MG_gene_species.cxx , merge.hxx
mg_get_first_sai_data1() : MG_extendeds.cxx
mg_get_first_sai_data2() : MG_extendeds.cxx
mg_get_first_species_data1() : MG_species.cxx
mg_get_first_species_data2() : MG_species.cxx
mg_get_selected_sai1() : MG_extendeds.cxx
mg_get_selected_sai2() : MG_extendeds.cxx
mg_get_selected_species1() : MG_species.cxx
mg_get_selected_species2() : MG_species.cxx
mg_initialize_SAI_selectors() : MG_extendeds.cxx
mg_initialize_species_selectors() : MG_species.cxx
MG_left_AWAR_SPECIES_NAME() : MG_species.cxx , merge.hxx
MG_map_species() : MG_species.cxx
MG_merge_tagged_field_cb() : MG_species.cxx
MG_method_changed_cb() : MG_gene_species.cxx
MG_props : MG_gene_species.cxx
MG_remapsPtr : MG_species.cxx
MG_SAI_selector : MG_extendeds.cxx
MG_save_cb() : MG_main.cxx
MG_save_quick_result_cb() : MG_main.cxx
mg_select_sai1() : MG_extendeds.cxx
mg_select_sai2() : MG_extendeds.cxx
mg_select_species1() : MG_species.cxx
mg_select_species2() : MG_species.cxx
MG_set_renamed() : merge.hxx , MG_names.cxx
MG_source_field_changed_cb() : MG_gene_species.cxx
MG_species_selector : MG_species.cxx
MG_transfer_config() : MG_configs.cxx
MG_transfer_extended() : MG_extendeds.cxx
MG_transfer_fields_info() : MG_species.cxx
mg_transfer_listed_species() : MG_species.cxx
MG_transfer_one_species() : MG_species.cxx
mg_transfer_selected_species() : MG_species.cxx
MG_transfer_species() : MG_species.cxx
MG_transfer_tree() : MG_trees.cxx
MG_update_example() : MG_gene_species.cxx
MG_update_selection_list_on_field_transfers() : MG_gene_species.cxx
mg_xfer_via_fts() : MG_species.cxx
MHO : ClustalV.cxx
mid() : adlang1.cxx
MIDDLE_BUTTON : RNA3D_Interface.hxx
MIDDLE_WIDGET : aw_window_Xm.hxx
min : ureadseq.h , global.h , arb_dnarates.cxx , adoptimize.cxx , fast_aligner.cxx , f2c.h
MIN_ALIGNMENT_RANGE : fast_aligner.cxx
MIN_BOTTOM_OFFSET : AW_button.cxx
MIN_COMPR_WORD_LEN : adoptimize.cxx
MIN_DESIGN_PROBE_LENGTH : PT_new_design.cxx
MIN_FAMILY_SIZE_DEFAULT : ali_global.cxx
MIN_FONTSIZE : aw_def.hxx
min_former_value : ED4_protein_2nd_structure.cxx
MIN_INFO : DNAml_rates_1_0.h
MIN_LONGLEN : adoptimize.cxx
MIN_MARK_BOX_SIZE : ED4_text_terminals.cxx
min_mutations_initialized_for_codenr : AP_seq_protein.cxx
MIN_PROBE_LENGTH : probe.h
MIN_RIGHT_OFFSET : AW_button.cxx
MIN_SECONDS_PER_ROW : arb_handlers.cxx
MIN_SEQUENCE_LENGTH : pars_main.hxx
MIN_SHORTLEN : adoptimize.cxx
MIN_SIZE_IN_FLAGS : PT_prefixtree.cxx
MIN_TEXTFIELD_SIZE : AWT_input_mask.cxx
MIN_WEIGHT_DEFAULT : ali_global.cxx
MIN_WORD_LEN : adoptimize.cxx
minDepth : rns.c
MINDIST : align.cxx
minfit_() : eispack.cxx
mininfo : arb_dnarates.cxx
MINLENGTH : align.cxx
minmax_awar_pair_changed_cb() : probe_design.cxx
MINMAX_GRANULARITY : DI_view_matrix.cxx
MINSIZE : mem.cxx
MINUTES : UnitTester.hxx
MIO : arb_export_rates.cxx
MISSING_LEFT : NT_taxonomy.cxx
MISSING_NODE : SQ_functions.h
MISSING_RIGHT : NT_taxonomy.cxx
MISSING_TEST : test_unit.h
MissingArgumentFor() : mkptypes.cxx
MITO : di_protdist.hxx
mix() : item_shader.h
mix_floats() : ValueTuple.cxx
mixtree_and_calclengths() : PARS_main.cxx
MM : AWT_canio.cxx
mm2inch() : AWT_canio.cxx
mm_per_inch : AWT_canio.cxx
mnemonic : item_sel_list.cxx
mod_boolrule_cb() : saicalc.cxx
moddef : AW_xkey.cxx
Mode : TestEnvironment.cxx
MODE_BUTTON_OFFSET : AW_window.cxx
mode_command : TestEnvironment.cxx
mode_is_user_writeable() : arb_file.cxx
MODE_TEXT_1BUTTON : mode_text.h
MODE_TEXT_1BUTTON_KEYS : mode_text.h
MODE_TEXT_2BUTTONS : mode_text.h
MODE_TEXT_2BUTTONS_KEYS : mode_text.h
MODE_TEXT_3BUTTONS : mode_text.h
MODE_TEXT_3BUTTONS_KEYS : mode_text.h
MODE_TEXT_PLACEHOLDER : mode_text.h
MODE_TEXT_STANDARD_ZOOMMODE : mode_text.h
modes_cb() : ED4_root.cxx
MODFREE : AW_xkey.cxx
modifies_awar() : recmac.cxx
modify_configurations() : NT_edconf.cxx
modify_fields_of_queried_cb() : db_query.cxx
modify_probe_event() : probe_design.cxx
modify_target_string() : probe_design.cxx
ModMode : probe_design.cxx
MODS : AW_xkey.cxx
modsai_cb() : ED4_block.cxx
module_initialized : ClustalV.cxx
modules : TestEnvironment.cxx
MODULES : TestEnvironment.cxx
MON : date.cxx
Month : date.cxx
MONTHS : NT_userland_fixes.cxx
motion_cb() : DI_view_matrix.cxx
motion_event() : AWT_canvas.cxx
MouseButton() : macinit.c
MouseMoveEventHandler() : RNA3D_Interface.cxx
MOVE : adali.cxx
move_and_update_rectangle() : ED4_window.cxx
move_dll_header() : aisc_extern.c , aisc_extern_privat.h
MOVE_DOWN : NT_concatenate.cxx
move_field_cb() : xfergui.cxx
MOVE_RULESET : xfergui.cxx
move_son() : CT_ntree.cxx
move_species_to_extended() : ui_species.cxx
MOVE_UP : NT_concatenate.cxx
moveGroupInfo_mapping : ad_trees.cxx
moveGroupInfo_predef : ad_trees.cxx
MP_aborted() : MP_externs.hxx , MP_noclass.cxx
MP_all_species_string() : pt_prototypes.h , PT_match.cxx
mp_assert : mkptypes.cxx , MultiProbe.hxx
MP_AWAR_AUTOADVANCE : MultiProbe.hxx
MP_AWAR_COMPLEMENT : MultiProbe.hxx
MP_AWAR_ECOLIPOS : MultiProbe.hxx
MP_AWAR_EMPHASIS : MultiProbe.hxx
MP_AWAR_GREYZONE : MultiProbe.hxx
MP_AWAR_LOADLIST : MultiProbe.hxx
MP_AWAR_MISMATCHES : MultiProbe.hxx
MP_AWAR_NOOFPROBES : MultiProbe.hxx
MP_AWAR_OUTSIDEMISMATCHES : MultiProbe.hxx
MP_AWAR_PROBELIST : MultiProbe.hxx
MP_AWAR_PTSERVER : MultiProbe.hxx
MP_AWAR_QUALITY : MultiProbe.hxx
MP_AWAR_QUALITYBORDER1 : MultiProbe.hxx
MP_AWAR_RESULTPROBES : MultiProbe.hxx
MP_AWAR_RESULTPROBESCOMMENT : MultiProbe.hxx
MP_AWAR_SELECTEDPROBES : MultiProbe.hxx
MP_AWAR_SEQIN : MultiProbe.hxx
MP_AWAR_SINGLEMISMATCHES : MultiProbe.hxx
MP_AWAR_WEIGHTEDMISMATCHES : MultiProbe.hxx
MP_cache_sonden() : mp_proto.hxx , MP_noclass.cxx
MP_cache_sonden2() : MP_noclass.cxx , mp_proto.hxx
MP_close_main() : MP_noclass.cxx , MP_externs.hxx
MP_collect_probes() : MP_Window.cxx
MP_Comment() : MP_noclass.cxx , mp_proto.hxx
MP_compute() : MultiProbe.hxx , MP_noclass.cxx
MP_count_all_species() : PT_match.cxx , pt_prototypes.h
MP_delete_selected() : MP_externs.hxx , MP_noclass.cxx
mp_file2list() : MP_Window.cxx
MP_gen_quality() : mp_proto.hxx , MP_noclass.cxx
MP_gen_singleprobe() : MP_noclass.cxx , mp_proto.hxx
MP_get_comment() : MP_noclass.cxx , MP_externs.hxx
MP_get_probes() : MP_noclass.cxx
mp_gl_awars : MultiProbe.hxx , MP_main.cxx
MP_group_all_except_marked() : MP_externs.hxx , MP_noclass.cxx
MP_init_local_com_struct() : MP_externs.hxx , MP_noclass.cxx
MP_is_probe() : MP_noclass.cxx
mp_list2file() : MP_Window.cxx
mp_main : MultiProbe.hxx , MP_main.cxx
MP_mark_probes_in_tree() : MP_noclass.cxx , mp_proto.hxx
MP_match_string() : PT_match.cxx , pt_prototypes.h
MP_modify_selected() : mp_proto.hxx , MP_noclass.cxx
MP_new_sequence() : mp_proto.hxx , MP_noclass.cxx
MP_NO_PROBE : mpdefs.h
MP_normal_colors_in_tree() : MP_externs.hxx , MP_noclass.cxx
MP_popup_result_window() : MP_noclass.cxx , MP_externs.hxx
MP_PROBE1 : mpdefs.h
MP_PROBE2 : mpdefs.h
MP_PROBE3 : mpdefs.h
MP_PROBE4 : mpdefs.h
MP_PROBE5 : mpdefs.h
MP_PROBE6 : mpdefs.h
MP_PROBE7 : mpdefs.h
MP_PROBE8 : mpdefs.h
MP_probe_tab : MP_main.cxx , MultiProbe.hxx
MP_result_combination_chosen() : MP_noclass.cxx , MP_externs.hxx
MP_selected_chosen() : MP_noclass.cxx , MP_externs.hxx
MP_show_probes_in_tree() : MP_externs.hxx , MP_noclass.cxx
MP_show_probes_in_tree_move() : MP_noclass.cxx , MP_externs.hxx
mrpb_allocated : rns.c
mrpb_anz : rns.c
mrpb_Init : rns.h , rns.c
MS : arb_sleep.h
MSIZE : align.cxx
MT_BASIC : MetaTag.h
MT_CONTIG : MetaTag.h
MT_END : MetaTag.h
MT_FEATURE : MetaTag.h
MT_FEATURE_START : MetaTag.h
MT_HEADER : MetaTag.h
MT_IGNORE : MetaTag.h
MT_KEYS : mode_text.h
MT_LEFT : mode_text.h
MT_MIDDLE : mode_text.h
MT_MODE : mode_text.h
MT_REF : MetaTag.h
MT_REF_DBID : MetaTag.h
MT_REF_START : MetaTag.h
MT_RIGHT : mode_text.h
MT_SEQUENCE_START : MetaTag.h
mtoe() : prototypes.h , embl.cxx
mtog() : mg.cxx , prototypes.h
mtog_decode_ref_and_remarks() : mg.cxx
mtog_genbank_def_and_source() : mg.cxx
MULTI_DIRS : aw_file.hxx
MULTI_GAP_FACTOR_DEFAULT : ali_global.cxx
MULTI_INSERT_FACTOR_DEFAULT : ali_global.cxx
multi_name_manager_spec : ED4_manager.cxx
multi_sequence_manager_spec : ED4_manager.cxx
multi_species_man_consensus_id_starts_with() : ED4_cursor.cxx
multi_species_manager_spec : ED4_manager.cxx
multifurcation_cb() : ad_trees.cxx
MULTIROOT_SEARCH_DEPTH : NT_syncroot.cxx
multiroot_sync_subsetTrees() : NT_syncroot.cxx
MultirootPtr : SyncRoot.hxx
Multitype : f2c.h
MULTROULETTEFACTOR : MultiProbe.hxx
mutateRNS() : rns.c
MUTATION_WS : MultiProbe.hxx
mutationRate : rns.h , rns.c
mutationRatePerBase : rns.c
Mutations : AP_sequence.hxx
mutexDir() : TestEnvironment.cxx
MV_DOWN : xfergui.cxx
MV_OFF : xfergui.cxx
MV_UP : xfergui.cxx
my_perl : perlmain_source.c
my_strupr() : probe_design.cxx
mygetc() : arb_a2ps.c