#include <attributes.h>
Go to the source code of this file.
Functions | |
| AW_window * | MERGE_create_main_window (AW_root *aw_root, bool dst_is_new, void(*exit_cb)(const char *)) |
| void | MERGE_create_all_awars (AW_root *awr, AW_default aw_def) |
| void | MERGE_create_db_file_awars (AW_root *awr, AW_default aw_def, const char *src_name, const char *dst_name) |
| GB_ERROR | MERGE_sequences_simple (AW_root *awr) |
Variables | |
| GBDATA * | GLOBAL_gb_src |
| GBDATA * | GLOBAL_gb_dst |
Function Documentation
| AW_window* MERGE_create_main_window | ( | AW_root * | aw_root, |
| bool | dst_is_new, | ||
| void(*)(const char *) | exit_cb | ||
| ) |
Definition at line 153 of file MG_main.cxx.
References AW_window::activate(), AW_window::at(), AW_insert_common_property_menu_entries(), aw_message_if(), aw_question(), AW_save_properties(), AWAR_DB_DST, AWAR_DB_SRC, awm, AWM_ALL, AWM_DISABLED, AW_window::button_length(), AW_window::callback(), configure_macro_recording(), AW_window::create_button(), AW_window::create_menu(), error(), GB_change_my_security(), GB_is_server(), GB_read_clients(), GBT_mark_all(), GEN_is_genome_db(), GLOBAL_gb_dst, GLOBAL_gb_src, AW_window::help_text(), AW_window_simple_menu::init(), AW_window::insert_help_topic(), insert_macro_menu_entry(), AW_window::insert_menu_topic(), AW_window::load_xfig(), makeHelpCallback(), mg_assert, MG_create_db_dependent_awars(), MG_create_merge_alignment_window(), MG_create_merge_configs_window(), MG_create_merge_names_window(), MG_create_merge_SAIs_window(), MG_create_merge_species_window(), MG_create_merge_trees_window(), MG_create_save_as_window(), MG_exit(), MG_exit_cb, MG_save_quick_result_cb(), MG_set_renamed(), NULp, AW_window::sens_mask(), and AW_window::sep______________().
Referenced by startup_merge_main_window().
| void MERGE_create_all_awars | ( | AW_root * | awr, |
| AW_default | aw_def | ||
| ) |
Definition at line 344 of file MG_main.cxx.
References MG_create_config_awar(), MG_create_extendeds_awars(), MG_create_gene_species_awars(), MG_create_rename_awars(), MG_create_species_awars(), and MG_create_trees_awar().
Referenced by startup_gui().
| void MERGE_create_db_file_awars | ( | AW_root * | awr, |
| AW_default | aw_def, | ||
| const char * | src_name, | ||
| const char * | dst_name | ||
| ) |
Definition at line 395 of file MG_main.cxx.
References AWAR_DB_DST, AWAR_DB_SRC, and create_fileselection_and_name_awars().
Referenced by startup_merge_main_window().
Merge the sequences of two databases
Definition at line 738 of file MG_species.cxx.
References ARB_strdup(), aw_input(), aw_message_if(), aw_question(), AW_root::awar(), AWAR_SPECIES_NAME, AWTC_create_numbered_suffix(), GB_transaction::close(), error(), FALLTHROUGH, GB_await_error(), GB_copy_dropMarksAndTempstate(), GB_create_container(), GB_delete(), GB_entry(), GB_nextEntry(), GB_number_of_subentries(), GB_raise_user_flag(), GB_read_string(), GB_search(), GB_STRING, GB_USERFLAG_QUERY, GB_write_flag(), GBS_free_hash(), GBS_global_string(), GBS_read_hash(), GBS_write_hash(), GBT_create_species_hash_sized(), GBT_get_species_data(), GBT_write_string(), GLOBAL_gb_dst, GLOBAL_gb_src, mg_assert, MG_equal_alignments(), MG_transfer_fields_info(), NULp, warning(), and AW_awar::write_string().
Referenced by nt_seq_load_cb().
Variable Documentation
| GBDATA* GLOBAL_gb_src |
Definition at line 31 of file MG_main.cxx.
Referenced by calculate_preserves_cb(), create_mg_merge_tagged_fields_window(), find_SAI_candidates(), find_species_candidates(), get_gb_main(), get_global_alignments(), MERGE_create_main_window(), MERGE_sequences_simple(), mg_check_field_cb(), MG_copy_and_check_alignments(), MG_create_field_content(), MG_create_merge_configs_window(), MG_create_merge_SAIs_window(), MG_create_merge_species_window(), MG_create_merge_trees_window(), MG_create_preserves_selection_window(), MG_equal_alignments(), mg_get_first_sai_data1(), mg_get_first_species_data1(), mg_get_selected_sai1(), mg_get_selected_species1(), MG_merge_tagged_field_cb(), MG_transfer_config(), MG_transfer_extended(), MG_transfer_fields_info(), mg_transfer_listed_species(), mg_transfer_selected_species(), MG_transfer_tree(), MG_update_example(), mg_xfer_via_fts(), NT_import_sequences(), nt_seq_load_cb(), popup_single_field_transfer_window(), rename_both_databases(), MergeFieldScanner::scanFields(), startup_gui(), test_references_cb(), transfer_field_of_listed_cb(), transfer_field_of_selected_cb(), transfer_tree(), and ScopedTransporter::transferAllIn().
| GBDATA* GLOBAL_gb_dst |
Definition at line 32 of file MG_main.cxx.
Referenced by calculate_preserves_cb(), create_mg_check_fields_window(), create_mg_merge_tagged_fields_window(), find_SAI_candidates(), find_species_candidates(), get_gb_main(), get_global_alignments(), init_preserve_awars(), ScopedTransporter::markTarget(), MERGE_create_main_window(), MERGE_sequences_simple(), mg_check_field_cb(), MG_copy_and_check_alignments(), MG_create_merge_configs_window(), MG_create_merge_SAIs_window(), MG_create_merge_species_window(), MG_create_merge_trees_window(), MG_create_preserves_selection_window(), MG_create_save_as_window(), MG_equal_alignments(), mg_get_first_sai_data2(), mg_get_first_species_data2(), mg_get_selected_sai2(), mg_get_selected_species2(), MG_merge_tagged_field_cb(), MG_save_cb(), MG_transfer_config(), MG_transfer_extended(), MG_transfer_fields_info(), mg_transfer_listed_species(), MG_transfer_one_species(), mg_transfer_selected_species(), MG_transfer_tree(), mg_xfer_via_fts(), nt_seq_load_cb(), rename_both_databases(), MergeFieldScanner::scanFields(), startup_gui(), test_references_cb(), transfer_field_of_listed_cb(), transfer_field_of_selected_cb(), transfer_tree(), and ScopedTransporter::transferAllIn().
