AP_Tree.hxx File Reference

#include <ARB_Tree.hxx>
#include <AP_sequence.hxx>

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Classes
struct	AP_rates
struct	group_scaling
class	AP_tree_root
struct	AP_tree_members
class	AP_tree

Namespaces
	tree_defaults

Macros
#define	AP_F_LOADED   ((AW_active)1)
#define	AP_F_NLOADED   ((AW_active)2)
#define	AP_F_SEQUENCES   ((AW_active)4)
#define	AP_F_MATRIX   ((AW_active)8)
#define	AP_F_TREE   ((AW_active)16)
#define	AP_F_ALL   ((AW_active)-1)

Typedefs
typedef void(*	AP_rootChangedCb )(void *cd, AP_tree *old, AP_tree *newroot)
typedef void(*	AP_nodeDelCb )(void *cd, AP_tree *del)

Enumerations
enum	AP_UPDATE_FLAGS { AP_UPDATE_OK = 0, AP_UPDATE_RELINKED = -1, AP_UPDATE_RELOADED = 1, AP_UPDATE_ERROR = 2 }
enum	AWT_RemoveType {   AWT_REMOVE_MARKED = GBT_REMOVE_MARKED, AWT_REMOVE_UNMARKED = GBT_REMOVE_UNMARKED, AWT_REMOVE_ZOMBIES = GBT_REMOVE_ZOMBIES, AWT_REMOVE_NO_SEQUENCE = 8,   AWT_KEEP_MARKED = AWT_REMOVE_UNMARKED|AWT_REMOVE_ZOMBIES }

Functions
	MARK_NONFINAL_CLASS (AP_tree_root)
	MARK_NONFINAL_FUNCTION (AP_tree_root, GB_ERROR, saveToDB,(), NULp)
	MARK_NONFINAL_FUNCTION (AP_tree_root, TreeNode *, makeNode,() const, NULp)
	MARK_NONFINAL_METHOD (AP_tree_root, destroyNode,(TreeNode *) const)
	MARK_NONFINAL_FUNCTION (AP_tree_root, AP_UPDATE_FLAGS, check_update,(), AP_UPDATE_ERROR)
	MARK_NONFINAL_CLASS (AP_tree)
	MARK_NONFINAL_FUNCTION (AP_tree, AP_tree *, REMOVE,(), NULp)
	MARK_NONFINAL_METHOD (AP_tree, swap_sons,())
	MARK_NONFINAL_METHOD (AP_tree, moveNextTo,(AP_tree *, AP_FLOAT))

Variables
const float	tree_defaults::SPREAD = 1.0
const float	tree_defaults::ANGLE = 0.0
const char	tree_defaults::LINEWIDTH = 0
const float	tree_defaults::LENGTH = DEFAULT_BRANCH_LENGTH

Macro Definition Documentation

#define AP_F_LOADED   ((AW_active)1)

Definition at line 14 of file AP_Tree.hxx.

#define AP_F_NLOADED   ((AW_active)2)

Definition at line 15 of file AP_Tree.hxx.

#define AP_F_SEQUENCES   ((AW_active)4)

Definition at line 16 of file AP_Tree.hxx.

#define AP_F_MATRIX   ((AW_active)8)

Definition at line 17 of file AP_Tree.hxx.

#define AP_F_TREE   ((AW_active)16)

Definition at line 18 of file AP_Tree.hxx.

#define AP_F_ALL   ((AW_active)-1)

Definition at line 19 of file AP_Tree.hxx.

Typedef Documentation

typedef void(* AP_rootChangedCb)(void *cd, AP_tree *old, AP_tree *newroot)

Definition at line 78 of file AP_Tree.hxx.

typedef void(* AP_nodeDelCb)(void *cd, AP_tree *del)

Definition at line 79 of file AP_Tree.hxx.

Enumeration Type Documentation

enum AP_UPDATE_FLAGS

Enumerator
AP_UPDATE_OK
AP_UPDATE_RELINKED
AP_UPDATE_RELOADED
AP_UPDATE_ERROR

Definition at line 28 of file AP_Tree.hxx.

enum AWT_RemoveType

Enumerator
AWT_REMOVE_MARKED
AWT_REMOVE_UNMARKED
AWT_REMOVE_ZOMBIES
AWT_REMOVE_NO_SEQUENCE
AWT_KEEP_MARKED

Definition at line 35 of file AP_Tree.hxx.

Function Documentation

MARK_NONFINAL_CLASS

(

AP_tree_root

)

MARK_NONFINAL_FUNCTION	(	AP_tree_root	,
		GB_ERROR	,
		saveToDB	,
		()	,
		NULp
	)

MARK_NONFINAL_FUNCTION	(	AP_tree_root	,
		TreeNode *	,
		makeNode	,
		()	const,
		NULp
	)

MARK_NONFINAL_METHOD	(	AP_tree_root	,
		destroyNode	,
		(TreeNode *)	const
	)

MARK_NONFINAL_FUNCTION	(	AP_tree_root	,
		AP_UPDATE_FLAGS	,
		check_update	,
		()	,
		AP_UPDATE_ERROR
	)

MARK_NONFINAL_CLASS

(

AP_tree

)

MARK_NONFINAL_FUNCTION	(	AP_tree	,
		AP_tree *	,
		REMOVE	,
		()	,
		NULp
	)

MARK_NONFINAL_METHOD	(	AP_tree	,
		swap_sons	,
		()
	)

MARK_NONFINAL_METHOD	(	AP_tree	,
		moveNextTo	,
		(AP_tree *, AP_FLOAT)
	)