#include <aw_root.hxx>#include <aw_question.hxx>#include <aw_awars.hxx>#include <aw_window.hxx>#include "aw_msg.hxx"#include "aw_status.hxx"#include "aw_preset.hxx"#include <arbdbt.h>#include <arb_strbuf.h>#include <arb_sleep.h>#include <SigHandler.h>#include <cerrno>#include <cstdarg>#include <ctime>#include <unistd.h>
Go to the source code of this file.
Classes | |
| struct | aw_stg_struct |
Macros | |
| #define | FD_SET_TYPE |
| #define | AW_GAUGE_SIZE 40 |
| #define | AW_GAUGE_GRANULARITY 10000 |
| #define | AW_STATUS_KILL_DELAY 4000 |
| #define | AW_STATUS_LISTEN_DELAY 300 |
| #define | AW_STATUS_HIDE_DELAY 60 |
| #define | AW_STATUS_PIPE_CHECK_DELAY 1000*2 |
| #define | AWAR_STATUS "tmp/status/" |
| #define | AWAR_STATUS_TITLE AWAR_STATUS "title" |
| #define | AWAR_STATUS_TEXT AWAR_STATUS "text" |
| #define | AWAR_STATUS_GAUGE AWAR_STATUS "gauge" |
| #define | AWAR_STATUS_ELAPSED AWAR_STATUS "elapsed" |
| #define | AW_MESSAGE_LINES 500 |
| #define | FORCE_WEIGHTED_ESTIMATION |
| #define | AW_EST_BUFFER 5 |
| #define | POLL_TIMEOUT 0 |
| #define | WRITE_TIMEOUT 10000 |
| #define | MAX_SEC_WIDTH 7 |
| #define | MAX_SEC_WIDTH_STR stringize_pscan(MAX_SEC_WIDTH) |
Variables | |
| static aw_stg_struct | aw_stg |
| static time_t | status_started |
| static bool | timer_ok = false |
Macro Definition Documentation
| #define FD_SET_TYPE |
Definition at line 31 of file AW_status.cxx.
Referenced by aw_status_read_byte(), aw_status_read_int(), and aw_status_wait_for_open().
| #define AW_GAUGE_SIZE 40 |
Definition at line 34 of file AW_status.cxx.
Referenced by aw_initstatus(), and aw_status_read_command().
| #define AW_GAUGE_GRANULARITY 10000 |
Definition at line 35 of file AW_status.cxx.
Referenced by aw_status_gauge(), aw_status_read_command(), and aw_status_timer_listen_event().
| #define AW_STATUS_KILL_DELAY 4000 |
Definition at line 37 of file AW_status.cxx.
Referenced by aw_status_kill().
| #define AW_STATUS_LISTEN_DELAY 300 |
Definition at line 38 of file AW_status.cxx.
Referenced by aw_status_timer_listen_event().
| #define AW_STATUS_HIDE_DELAY 60 |
Definition at line 39 of file AW_status.cxx.
Referenced by aw_status_timer_listen_event().
| #define AW_STATUS_PIPE_CHECK_DELAY 1000*2 |
Definition at line 40 of file AW_status.cxx.
Referenced by aw_status_wait_for_open().
| #define AWAR_STATUS "tmp/status/" |
Definition at line 42 of file AW_status.cxx.
| #define AWAR_STATUS_TITLE AWAR_STATUS "title" |
Definition at line 43 of file AW_status.cxx.
Referenced by aw_initstatus(), aw_status_timer_event(), aw_status_timer_listen_event(), and create_status_awars().
| #define AWAR_STATUS_TEXT AWAR_STATUS "text" |
Definition at line 44 of file AW_status.cxx.
Referenced by aw_initstatus(), aw_status_timer_event(), aw_status_timer_listen_event(), and create_status_awars().
| #define AWAR_STATUS_GAUGE AWAR_STATUS "gauge" |
Definition at line 45 of file AW_status.cxx.
Referenced by aw_initstatus(), aw_status_timer_listen_event(), and create_status_awars().
| #define AWAR_STATUS_ELAPSED AWAR_STATUS "elapsed" |
Definition at line 46 of file AW_status.cxx.
Referenced by aw_initstatus(), aw_status_timer_listen_event(), and create_status_awars().
| #define AW_MESSAGE_LINES 500 |
Definition at line 48 of file AW_status.cxx.
Referenced by aw_clear_message_cb(), aw_insert_message_in_tmp_message_delayed(), aw_refresh_tmp_message_display(), and save_messagebox_content_to().
| #define FORCE_WEIGHTED_ESTIMATION |
Definition at line 63 of file AW_status.cxx.
| #define AW_EST_BUFFER 5 |
Definition at line 80 of file AW_status.cxx.
Referenced by aw_status_timer_listen_event().
| #define POLL_TIMEOUT 0 |
Definition at line 132 of file AW_status.cxx.
Referenced by aw_status_read_byte(), and aw_status_read_int().
| #define WRITE_TIMEOUT 10000 |
Definition at line 137 of file AW_status.cxx.
Referenced by mark_pipe_broken(), and safe_write().
| #define MAX_SEC_WIDTH 7 |
Definition at line 537 of file AW_status.cxx.
Referenced by sec2disp().
| #define MAX_SEC_WIDTH_STR stringize_pscan(MAX_SEC_WIDTH) |
Definition at line 538 of file AW_status.cxx.
Referenced by LOG_STATUS().
Enumeration Type Documentation
| enum StatusCommand |
| Enumerator | |
|---|---|
| AW_STATUS_OK | |
| AW_STATUS_ABORT | |
| AW_STATUS_CMD_INIT | |
| AW_STATUS_CMD_OPEN | |
| AW_STATUS_CMD_CLOSE | |
| AW_STATUS_CMD_NEW_TITLE | |
| AW_STATUS_CMD_TEXT | |
| AW_STATUS_CMD_GAUGE | |
| AW_STATUS_CMD_MESSAGE | |
Definition at line 66 of file AW_status.cxx.
| enum LogLevel |
| Enumerator | |
|---|---|
| LOG_ALWAYS | |
| LOG_ALWAYS_RESET_ONCE_LIMITS | |
| LOG_ALWAYS_WITH_ESTIMATION | |
| LOG_ONCE_PER_SECOND | |
| LOG_ONCE_PER_MINUTE_WITH_ESTIMATION | |
| LOG_ONCE_PER_15_MINUTES_WITH_ESTIMATION | |
Definition at line 607 of file AW_status.cxx.
Function Documentation
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Definition at line 140 of file AW_status.cxx.
References aw_stg_struct::err_no, aw_stg_struct::pipe_broken, and WRITE_TIMEOUT.
Referenced by safe_write().
Definition at line 167 of file AW_status.cxx.
References aw_assert, EXIT_FAILURE, mark_pipe_broken(), NULp, aw_stg_struct::pipe_broken, result, and WRITE_TIMEOUT.
Referenced by aw_status_gauge(), aw_status_write(), and status_write_cmd_and_text().
Definition at line 226 of file AW_status.cxx.
References safe_write().
Referenced by aw_closestatus(), aw_message(), aw_openstatus(), aw_status_gauge(), aw_status_kill(), and status_write_cmd_and_text().
Definition at line 231 of file AW_status.cxx.
References buffer, EXIT_FAILURE, FD_SET_TYPE, NULp, and POLL_TIMEOUT.
Referenced by aw_status_read_command().
Definition at line 258 of file AW_status.cxx.
References buffer, EXIT_FAILURE, FD_SET_TYPE, NULp, and POLL_TIMEOUT.
Referenced by aw_status_read_command().
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Definition at line 289 of file AW_status.cxx.
References AW_GAUGE_GRANULARITY, AW_GAUGE_SIZE, AW_STATUS_CMD_GAUGE, AW_STATUS_CMD_MESSAGE, AW_STATUS_CMD_NEW_TITLE, AW_STATUS_CMD_OPEN, AW_STATUS_CMD_TEXT, aw_status_read_byte(), aw_status_read_int(), buffer, and NULp.
Referenced by aw_status_aborted(), aw_status_timer_listen_event(), and aw_status_wait_for_open().
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Definition at line 334 of file AW_status.cxx.
References EXIT_FAILURE.
Referenced by aw_status_timer_listen_event(), and aw_status_wait_for_open().
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Definition at line 343 of file AW_status.cxx.
References aw_status_check_pipe(), AW_STATUS_CMD_INIT, AW_STATUS_OK, AW_STATUS_PIPE_CHECK_DELAY, aw_status_read_command(), FD_SET_TYPE, fflush(), aw_stg_struct::mode, and NULp.
Referenced by aw_initstatus().
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Definition at line 377 of file AW_status.cxx.
References aw_stg_struct::aws, aw_stg_struct::hide, and AW_window::show().
Referenced by aw_status_hide().
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Definition at line 385 of file AW_status.cxx.
References AW_root::add_timed_callback(), aw_status_timer_hide_event(), AW_window::get_root(), aw_stg_struct::hide, AW_window::hide(), and aw_stg_struct::hide_delay.
Referenced by aw_initstatus().
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Definition at line 402 of file AW_status.cxx.
References aw_message(), aw_message_if(), aw_question(), AW_STATUS_ABORT, AW_STATUS_OK, AW_root::awar(), AWAR_STATUS_TEXT, AWAR_STATUS_TITLE, EXIT_SUCCESS, fflush(), GBK_system(), GBS_global_string(), aw_stg_struct::mode, NULp, aw_stg_struct::pid, AW_awar::read_string(), and title.
Referenced by aw_status_kill().
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Definition at line 446 of file AW_status.cxx.
References AW_root::add_timed_callback(), aw_ask_sure(), AW_STATUS_ABORT, AW_STATUS_KILL_DELAY, AW_STATUS_OK, aw_status_timer_event(), aw_status_write(), aw_stg_struct::fd_from, fflush(), AW_window::get_root(), and aw_stg_struct::mode.
Referenced by aw_initstatus().
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Definition at line 469 of file AW_status.cxx.
References AW_MESSAGE_LINES, AW_root::awar(), AWAR_ERROR_MESSAGES, GBS_strstruct::cat(), GBS_strstruct::get_data(), aw_stg_struct::last_message_time, aw_stg_struct::last_refresh_time, aw_stg_struct::lines, aw_stg_struct::need_refresh, GBS_strstruct::put(), and AW_awar::write_string().
Referenced by aw_insert_message_in_tmp_message(), and aw_status_timer_listen_event().
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Definition at line 485 of file AW_status.cxx.
References ARB_alloc(), AW_MESSAGE_LINES, copy(), GBS_global_string_copy(), aw_stg_struct::last_message_time, aw_stg_struct::lines, message(), aw_stg_struct::need_refresh, and NULp.
Referenced by aw_insert_message_in_tmp_message(), and aw_status_timer_listen_event().
Definition at line 532 of file AW_status.cxx.
References aw_insert_message_in_tmp_message_delayed(), and aw_refresh_tmp_message_display().
Referenced by aw_message(), and aw_message_save_cb().
Definition at line 540 of file AW_status.cxx.
References arb_assert, buffer, long, MAX_SEC_WIDTH, and plural().
Referenced by aw_status_timer_listen_event(), and LOG_STATUS().
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Definition at line 616 of file AW_status.cxx.
References arb_test::nl().
Referenced by LOG_STATUS().
Definition at line 623 of file AW_status.cxx.
References fputc(), fputs(), aw_stg_struct::last_used_est, LOG_ALWAYS_RESET_ONCE_LIMITS, LOG_ALWAYS_WITH_ESTIMATION, LOG_ONCE_PER_15_MINUTES_WITH_ESTIMATION, LOG_ONCE_PER_MINUTE_WITH_ESTIMATION, LOG_ONCE_PER_SECOND, MAX_SEC_WIDTH_STR, readableTime(), sec2disp(), status_started, and timer_ok.
Referenced by aw_status_timer_listen_event().
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Definition at line 707 of file AW_status.cxx.
References AW_window::activate(), aw_assert, AW_EST_BUFFER, AW_GAUGE_GRANULARITY, aw_insert_message_in_tmp_message_delayed(), aw_refresh_tmp_message_display(), AW_STATUS_ABORT, aw_status_check_pipe(), AW_STATUS_CMD_CLOSE, AW_STATUS_CMD_GAUGE, AW_STATUS_CMD_MESSAGE, AW_STATUS_CMD_NEW_TITLE, AW_STATUS_CMD_OPEN, AW_STATUS_CMD_TEXT, AW_STATUS_HIDE_DELAY, AW_STATUS_LISTEN_DELAY, AW_STATUS_OK, aw_status_read_command(), AW_root::awar(), AWAR_STATUS_ELAPSED, AWAR_STATUS_GAUGE, AWAR_STATUS_TEXT, AWAR_STATUS_TITLE, aw_stg_struct::awm, aw_stg_struct::aws, buffer, diff(), aw_stg_struct::fd_to, fflush(), aw_stg_struct::hide, AW_window::hide(), aw_stg_struct::hide_delay, aw_stg_struct::is_child, aw_stg_struct::last_est_count, aw_stg_struct::last_estimation, aw_stg_struct::last_message_time, aw_stg_struct::last_refresh_time, aw_stg_struct::last_start, aw_stg_struct::last_used_est, LOG_ALWAYS, LOG_ALWAYS_RESET_ONCE_LIMITS, LOG_ALWAYS_WITH_ESTIMATION, LOG_ONCE_PER_15_MINUTES_WITH_ESTIMATION, LOG_ONCE_PER_MINUTE_WITH_ESTIMATION, LOG_ONCE_PER_SECOND, LOG_STATUS(), aw_stg_struct::mode, aw_stg_struct::need_refresh, NULp, AW_awar::read_char_pntr(), sec2disp(), AW_window::show(), status_started, timer_ok, and AW_awar::write_string().
Referenced by aw_initstatus().
| void aw_clear_message_cb | ( | AW_window * | aww | ) |
Definition at line 914 of file AW_status.cxx.
References AW_MESSAGE_LINES, AW_root::awar(), AWAR_ERROR_MESSAGES, AW_window::get_root(), aw_stg_struct::lines, and AW_awar::write_string().
Referenced by aw_clear_and_hide_message_cb(), aw_initstatus(), ED4_zoom_message_window(), and ED4_root::generate_window().
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Definition at line 920 of file AW_status.cxx.
References aw_clear_message_cb(), and AW_POPDOWN().
Referenced by aw_initstatus().
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Definition at line 925 of file AW_status.cxx.
References aw_message_if(), AW_MESSAGE_LINES, error(), fputc(), fputs(), GB_IO_error(), GB_path_in_HOME(), line, aw_stg_struct::lines, and NULp.
Referenced by aw_message_save_cb().
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Definition at line 945 of file AW_status.cxx.
References aw_insert_message_in_tmp_message(), AW_save_properties(), GBS_global_string_copy(), AW_window::get_root(), and save_messagebox_content_to().
Referenced by aw_initstatus().
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Definition at line 958 of file AW_status.cxx.
References AWAR_ERROR_MESSAGES, AWAR_STATUS_ELAPSED, AWAR_STATUS_GAUGE, AWAR_STATUS_TEXT, AWAR_STATUS_TITLE, and AW_root::awar_string().
Referenced by aw_initstatus().
| void aw_initstatus | ( | ) |
Definition at line 966 of file AW_status.cxx.
References AW_root::add_timed_callback_never_disabled(), aw_assert, aw_clear_and_hide_message_cb(), aw_clear_message_cb(), AW_GAUGE_SIZE, aw_message_save_cb(), AW_POPDOWN(), aw_status_hide(), aw_status_kill(), aw_status_timer_listen_event(), aw_status_wait_for_open(), AWAR_ERROR_MESSAGES, AWAR_STATUS_ELAPSED, AWAR_STATUS_GAUGE, AWAR_STATUS_TEXT, AWAR_STATUS_TITLE, awm, aw_stg_struct::awm, aw_stg_struct::aws, create_status_awars(), error(), aw_stg_struct::fd_from, aw_stg_struct::fd_to, fflush(), GB_install_pid(), GB_open_DBs(), GBK_terminate(), aw_stg_struct::hide, AW_window_menu_modes_opengl::init(), aw_stg_struct::is_child, AW_root::main_loop(), NULp, aw_stg_struct::pid, and AW_root::SINGLETON.
Referenced by ARB_main().
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Definition at line 1075 of file AW_status.cxx.
References aw_status_write(), aw_stg_struct::fd_to, and safe_write().
Referenced by aw_message(), aw_openstatus(), aw_status_subtitle(), aw_status_title(), and status_write_cmd_and_text().
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Definition at line 1079 of file AW_status.cxx.
References status_write_cmd_and_text().
| void aw_openstatus | ( | const char * | title | ) |
Definition at line 1084 of file AW_status.cxx.
References AW_STATUS_CMD_INIT, AW_STATUS_CMD_OPEN, AW_STATUS_OK, aw_status_write(), aw_stg_struct::fd_to, aw_stg_struct::mode, aw_stg_struct::status_initialized, and status_write_cmd_and_text().
| void aw_closestatus | ( | ) |
Definition at line 1093 of file AW_status.cxx.
References AW_STATUS_CMD_CLOSE, aw_status_write(), and aw_stg_struct::fd_to.
| void aw_status_title | ( | const char * | new_title | ) |
Definition at line 1097 of file AW_status.cxx.
References AW_STATUS_CMD_NEW_TITLE, and status_write_cmd_and_text().
| void aw_status_subtitle | ( | const char * | text | ) |
Definition at line 1100 of file AW_status.cxx.
References AW_STATUS_CMD_TEXT, and status_write_cmd_and_text().
| void aw_status_gauge | ( | double | gauge | ) |
Definition at line 1104 of file AW_status.cxx.
References aw_assert, AW_GAUGE_GRANULARITY, AW_STATUS_CMD_GAUGE, aw_status_write(), aw_stg_struct::fd_to, and safe_write().
| bool aw_status_aborted | ( | ) |
Definition at line 1118 of file AW_status.cxx.
References AW_STATUS_ABORT, aw_status_read_command(), aw_stg_struct::fd_from, aw_stg_struct::mode, NULp, ARB_timestamp::sec_since(), and ARB_timestamp::update().
| void aw_set_local_message | ( | ) |
Definition at line 1137 of file AW_status.cxx.
References aw_stg_struct::local_message.
Referenced by ED4_root::generate_window().
| void aw_message | ( | const char * | msg | ) |
Definition at line 1142 of file AW_status.cxx.
References aw_assert, aw_insert_message_in_tmp_message(), AW_STATUS_CMD_INIT, AW_STATUS_CMD_MESSAGE, aw_status_write(), aw_stg_struct::fd_to, aw_stg_struct::local_message, RUNNING_TEST, AW_root::SINGLETON, aw_stg_struct::status_initialized, and status_write_cmd_and_text().
Referenced by ad_move_tree_info(), add_field_cb(), adjustTreeRoot(), after_callback_guard(), SEC_region::align_helix_strands(), alignToNextRelative(), AW_window::alloc_named_data_color(), AP_user_pop_cb(), ARB_main(), askCopyMoveRuleset_cb(), AW_create_fileselection_awars(), aw_help_browse(), aw_help_edit_help(), aw_help_helpfile_changed_cb(), aw_help_search(), aw_message_and_dump_stderr(), aw_message_if(), aw_message_reload(), aw_question(), AW_reactivate_all_advices(), AW_reactivate_all_questions(), AW_save_specific_properties(), AW_server_callback(), aw_status_timer_event(), aw_window_avoid_destroy_cb(), AW_xfig::AW_xfig(), aw_xkey_2_awkey(), awt_string_handler::awar_changed(), awt_aps_go(), awt_create_input_mask(), AWT_create_mask_submenu(), AWT_initialize_input_mask(), AWT_input_mask_browse_url(), AWT_modify_managed_configs(), awt_openDefaultURL_on_selected_species(), awt_rename_cb(), AWT_show_file(), awtc_delete_names_file(), AWTC_generate_random_name(), awtc_nn_search(), awtc_nn_search_all_listed(), before_callback_guard(), boundloc_changed_cb(), build_reverse_complement(), calc_and_update_alignment_errors_cb(), FieldReader::calc_value(), ColumnStat::calculate(), DI_MATRIX::calculate(), calculate_clusters(), calculate_sai_cb(), Dict::canDecompress(), canvas_to_printer(), canvas_to_xfig_and_run_xfig(), change_constraints(), VarUpdateInfo::change_from_widget(), check_and_correct_current_field(), AWT_graphic_tree::check_for_DB_update(), check_for_remote_command(), clear_all_colors_cb(), color_group_name_changed_cb(), colorDefChanged_callback(), colstat_2_gnuplot_cb(), comment_changed_cb(), ED4_remap::compile(), concatenateAlignments(), concatenateFieldsCreateNewSpecies(), FINAL_TYPE< SEQTYPE >::configure_active_plugin(), copy_SAI_cb(), copy_SAI_to_species_cb(), QUERY::copy_selection_list_2_query_box(), AW_window::create_button(), create_macro_variables(), create_matrix_config_window(), create_modify_fields_window(), create_new_mask_cb(), create_new_species(), create_primer_design_window(), create_probe_design_variables(), createOpFromConfigAwar(), createValNameList(), del_boolrule_cb(), delete_ali_cb(), delete_cb(), delete_kept_ghostnodes(), delete_macro_cb(), delete_queried_species_cb(), delete_SAI_cb(), TreeAdmin::delete_tree_cb(), deleteColorTranslationTable(), InfoWindow::detach_selected_item(), detect_current_ref_terminal(), ArbImporter::detect_format(), detect_input_format_cb(), di_autodetect_callback(), di_calculate_tree_cb(), di_mark_by_distance(), InfoWindow::display_selected_item(), display_selected_rule_cb(), dot_missing_bases(), ed4_create_all_awars(), ED4_finish_and_show_notFoundMessage(), ED4_get_and_jump_to_current(), ED4_get_and_jump_to_selected_SAI(), ED4_get_and_jump_to_species(), ED4_get_marked_from_menu(), ED4_helix_jump_opposite(), ED4_jump_to_current_species(), ED4_jump_to_cursor_position(), ED4_menu_highlight(), ED4_pfold_select_SAI_and_update_option_menu(), ED4_remove_faligner_entries(), ED4_restore_curpos(), ED4_search_cb(), ED4_set_col_stat_threshold(), ED4_set_helixnr(), ED4_set_iupac(), ED4_set_protection(), ED4_show_protein_match_on_device(), ED4_start_editor_on_configuration(), ED4_store_curpos(), ED4_toggle_detailed_column_stats(), ED4_undo_redo(), ED4_with_whole_block(), ed_save_var_to_file(), ed_submit_info_event(), ED4_Edit_String::edit(), ProbeValuation::evolution(), exec_macro_cb(), execute_macro(), executeKeystroke(), expect_species_selected(), experiment_delete_cb(), export_go_cb(), export_nds_cb(), export_structure_to_file(), export_to_DB(), ExposeOpenGLWindow(), field_convert_commit_cb(), field_create_cb(), field_delete_cb(), fieldtype_changed_cb(), AWT_tree_selection::fill(), PT_selection::fill(), MO_Liste::fill_marked_bakts(), EDB_root_bact::fill_species(), fillSelNamList(), find_SAI_candidates(), find_species_candidates(), fit_pages(), GDE_showhelp_cb(), GDE_startaction_cb(), GEN_create_nds_vars(), gen_extract_gene_2_pseudoSpecies(), Sonde::gen_Hitliste(), GEN_make_node_text_nds(), GEN_mark_command(), GEN_perform_command(), GEN_root::GEN_root(), GEN_select_gene(), GEN_undo_cb(), gene_create_cb(), gene_delete_cb(), ED4_root::generate_window(), group_clusters(), group_species(), FormatTester::handle_action_cb(), hide_field_cb(), AW_window::hide_or_notify(), ArbImporter::import_and_continueOnSuccess(), ArbImporter::import_data(), import_structure_from_file(), PH_display::initialize_display(), input_cb(), insdel_event(), insdel_sai_event(), InsertDatainGDE(), ED4_cursor::jump_screen_pos(), jump_to_next_helix_cb(), AWT_configuration::keep_changed_fields(), ED4_terminal::kill_object(), launch_MapViewer_cb(), lintRuleset(), load_probe_collection(), load_search_paras_from_file(), LoadData(), loadsave_colorset_cb(), macro_terminated(), di_protdist::makedists(), AW_awar::map(), mark_action(), AP_tree::mark_duplicates(), mark_gene_species_using_current_alignment(), mark_nontree_cb(), mark_tree_cb(), matrix_config_changed_cb(), FastAlignReport::memorize_insertion(), mergeSimilarSpecies(), mg_check_field_cb(), MG_config_delete_cb(), MG_copy_and_check_alignments(), MG_create_db_dependent_rename_awars(), MG_create_merge_configs_window(), MG_create_merge_species_window(), MG_create_merge_trees_window(), MG_create_remap(), MG_delete_selected_field_def(), MG_export_fields(), MG_extended_delete_cb(), MG_merge_tagged_field_cb(), MG_save_cb(), MG_save_quick_result_cb(), MG_source_field_changed_cb(), MG_transfer_config(), MG_transfer_extended(), mg_transfer_listed_species(), mg_transfer_selected_species(), MG_transfer_tree(), mod_boolrule_cb(), modify_target_string(), move_species_to_extended(), MP_compute(), mp_file2list(), MP_mark_probes_in_tree(), MP_new_sequence(), MP_selected_chosen(), MP_show_probes_in_tree(), multiroot_sync_subsetTrees(), n_encode(), NDS_popup_select_srtaci_window(), nds_restore_config(), ArbImporter::next_file(), awt_input_mask_global::no_item_selected(), nt_add(), NT_alltree_remove_leafs(), NT_convert_gene_locations(), NT_count_different_chars(), nt_create_all_awars(), NT_create_main_window(), NT_create_sai_from_pfold(), NT_createConcatenationAwars(), NT_del_mark_move_REF(), nt_delete_configuration(), nt_delete_database(), NT_delete_mark_all_cb(), NT_deleteValidNames(), NT_edit_bootstrap(), nt_extract_configuration(), NT_fix_dict_compress(), NT_fix_gene_data(), NT_import_sequences(), NT_importValidNames(), NT_jump_cb(), NT_mark_all_cb(), NT_move_boot_branch(), NT_multifurcate_tree(), NT_reload_tree_event(), NT_remove_bootstrap(), NT_remove_leafs(), nt_rename_configuration(), NT_rerepair_DB(), NT_reset_branchlengths(), NT_resort_data_by_phylogeny(), NT_resort_data_by_user_criteria(), NT_save_quick_cb(), NT_scale_tree(), NT_suggestValidNames(), NT_undo_cb(), p_encode(), SEC_root::paintSearchPatternStrings(), pars_create_all_awars(), pars_start_cb(), pd_export_pt_server(), pd_kill_pt_server(), pd_start_pt_server(), awt_mask_action::perform_action(), perform_query_cb(), ph_calc_filter_cb(), popup_interrupt_macro_window_cb(), preCreateTempfile(), predef_prg(), primer_design_event_go(), primer_design_event_init(), probe_design_event(), probe_match_event(), probe_match_with_specificity_event(), PV_PrintMissingDBentryInformation(), PV_SaveData(), PV_WriteTranslatedSequenceToDB(), quick_scan_input_mask(), ReadArbdb(), ReadArbdb2(), realign_event(), AP_tree::recompute_and_write_folding(), refDbModeChanged_cb(), UserlandCheck::Register(), RegFieldSelection::registrate(), ED4_seq_colors::reload(), reload_ecoli_cb(), reload_helix_cb(), remote_command_handler(), rename_both_databases(), GroupUIdata::rename_listed_groups(), rename_SAI_cb(), renameDB(), reorder_keys(), reorder_trees_cb(), reorder_up_down(), ReplaceArgs(), restore_colorset_representation(), AP_main::revert_user_state(), rootsync_subsetTrees_vs_selected(), ruleset_awar_changed_cb(), Aligner::run(), AW_cb::run_callbacks(), saicalc_edit_method_cb(), save_search_paras_to_file(), AWT_graphic_tree::save_to_DB(), AP_tree_root::saveToDB(), QUERY::search_duplicated_field_content(), searchParamsChanged(), SearchTree::SearchTree(), SEC_delete_structure(), SEC_toggle_cb(), SEC_undo_cb(), selectValidNameFromList(), sequence_changed_cb(), set_diff_reference(), set_field_of_queried_cb(), set_protection_of_queried_cb(), show_count(), GroupChanges::show_message(), sina_cmd_changed_cb(), sina_start(), species_copy_cb(), species_delete_cb(), species_rename_join(), sq_calc_seq_quality_cb(), st_check_cb(), ST_Container::ST_Container(), st_remove_entries(), start_macro_cb(), startup_sequence_cb(), store_cb(), sync_changed_cb(), AWT_graphic_tree::toggle_group(), toggle_helix_for_SAI(), ED4_block::toggle_type(), track_ali_change_cb(), trackAlignmentChanges(), transfer_field_of_listed_cb(), transfer_field_of_selected_cb(), transl_def_changed_cb(), translate_config_changed_cb(), TranslateGeneToAminoAcidSequence(), transpro_event(), SearchSettings::update(), ED4_manager::update_bases_and_rebuild_consensi(), GroupBuilder::update_group(), update_rulesAwar(), updateValNameList(), useSelectedAlignment(), AWT_graphic_tree::warn_inappropriate_mode(), warn_unknown_awar(), warn_unrecordable(), Warning(), with_affected_clusters_do(), NodeTextBuilder::work(), AWT_config_definition::write(), write_file(), ED4_terminal::write_sequence(), AWT_config::write_to_awars(), AWT_canvas::zoom(), and EG2PS_data::~EG2PS_data().
Variable Documentation
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Definition at line 106 of file AW_status.cxx.
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Definition at line 604 of file AW_status.cxx.
Referenced by aw_status_timer_listen_event(), and LOG_STATUS().
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Definition at line 605 of file AW_status.cxx.
Referenced by aw_status_timer_listen_event(), and LOG_STATUS().
