ARB
Classes | Macros | Enumerations
RNA3D_StructureData.hxx File Reference
#include <arbdb.h>
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Classes

struct  Struct2Dplus3D
 
struct  Struct2Dinfo
 
struct  Struct3Dinfo
 
struct  HelixNrInfo
 
struct  CurrSpecies
 
struct  Insertions
 
struct  Structure3D
 

Macros

#define SAI   0
 
#define SEARCH   1
 
#define SSU_16S   1
 
#define LSU_23S   2
 
#define LSU_5S   3
 
#define _1PNU   1
 
#define _1VOR   2
 
#define _1C2W   3
 

Enumerations

enum  {
  STRUCTURE_BACKBONE = 300, STRUCTURE_BACKBONE_CLR, HELIX_NUMBERS, HELIX_NUMBERS_POINTS,
  HELIX_A, HELIX_G, HELIX_C, HELIX_U,
  UNPAIRED_HELIX_A, UNPAIRED_HELIX_G, UNPAIRED_HELIX_C, UNPAIRED_HELIX_U,
  NON_HELIX_A, NON_HELIX_G, NON_HELIX_C, NON_HELIX_U,
  STRUCTURE_POS, STRUCTURE_POS_ANCHOR, MAP_SPECIES_BASE_DIFFERENCE, MAP_SPECIES_BASE_DIFFERENCE_POS,
  MAP_SPECIES_BASE_DIFFERENCE_POS_ANCHOR, MAP_SPECIES_BASE_A, MAP_SPECIES_BASE_G, MAP_SPECIES_BASE_C,
  MAP_SPECIES_BASE_U, MAP_SPECIES_DELETION, MAP_SPECIES_MISSING, MAP_SPECIES_INSERTION_POINTS,
  MAP_SPECIES_INSERTION_BASES, MAP_SPECIES_INSERTION_BASES_ANCHOR, MAP_SAI_TO_STRUCTURE, MAP_SEARCH_STRINGS_TO_STRUCTURE,
  MAP_SEARCH_STRINGS_BACKBONE, ECOLI_CURSOR_POSITION, ECOLI_TERTIARY_INTRACTION_PSEUDOKNOTS, ECOLI_TERTIARY_INTRACTION_TRIPLE_BASES
}
 

Macro Definition Documentation

#define SAI   0

Definition at line 18 of file RNA3D_StructureData.hxx.

Referenced by Structure3D::MapSaiToEcoliTemplate(), and ValidSearchColor().

#define SEARCH   1
#define SSU_16S   1
#define LSU_23S   2
#define LSU_5S   3
#define _1PNU   1

Definition at line 25 of file RNA3D_StructureData.hxx.

Referenced by Structure3D::ReadCoOrdinateFile().

#define _1VOR   2

Definition at line 26 of file RNA3D_StructureData.hxx.

Referenced by Structure3D::ReadCoOrdinateFile().

#define _1C2W   3

Definition at line 27 of file RNA3D_StructureData.hxx.

Referenced by Structure3D::ReadCoOrdinateFile().

Enumeration Type Documentation

anonymous enum
Enumerator
STRUCTURE_BACKBONE 
STRUCTURE_BACKBONE_CLR 
HELIX_NUMBERS 
HELIX_NUMBERS_POINTS 
HELIX_A 
HELIX_G 
HELIX_C 
HELIX_U 
UNPAIRED_HELIX_A 
UNPAIRED_HELIX_G 
UNPAIRED_HELIX_C 
UNPAIRED_HELIX_U 
NON_HELIX_A 
NON_HELIX_G 
NON_HELIX_C 
NON_HELIX_U 
STRUCTURE_POS 
STRUCTURE_POS_ANCHOR 
MAP_SPECIES_BASE_DIFFERENCE 
MAP_SPECIES_BASE_DIFFERENCE_POS 
MAP_SPECIES_BASE_DIFFERENCE_POS_ANCHOR 
MAP_SPECIES_BASE_A 
MAP_SPECIES_BASE_G 
MAP_SPECIES_BASE_C 
MAP_SPECIES_BASE_U 
MAP_SPECIES_DELETION 
MAP_SPECIES_MISSING 
MAP_SPECIES_INSERTION_POINTS 
MAP_SPECIES_INSERTION_BASES 
MAP_SPECIES_INSERTION_BASES_ANCHOR 
MAP_SAI_TO_STRUCTURE 
MAP_SEARCH_STRINGS_TO_STRUCTURE 
MAP_SEARCH_STRINGS_BACKBONE 
ECOLI_CURSOR_POSITION 
ECOLI_TERTIARY_INTRACTION_PSEUDOKNOTS 
ECOLI_TERTIARY_INTRACTION_TRIPLE_BASES 

Definition at line 30 of file RNA3D_StructureData.hxx.