ps_convert_db.cxx File Reference

#include "ps_tools.hxx"
#include "ps_database.hxx"
#include "ps_pg_tree_functions.hxx"
#include "ps_pg_specmap.hxx"
#include <sys/times.h>

Include dependency graph for ps_convert_db.cxx:

Go to the source code of this file.

Functions
static void	PS_detect_probe_length (GBDATA *_ARB_node)
PS_NodePtr	PS_assert_inverse_path (const int _max_depth, const int _caller_ID, IDVector *_path)
PS_NodePtr	PS_assert_path (const int _caller_ID, IDVector *_path)
void	PS_extract_probe_data (GBDATA *_ARB_node, int _max_depth, int _depth, const int _parent_ID, IDVector *_inverse_path)
int	main (int _argc, char *_argv[])

Variables
static PS_NodePtr	__ROOT
static int	__PROBE_LENGTH
static SpeciesID	__MIN_ID
static SpeciesID	__MAX_ID

Function Documentation

static void PS_detect_probe_length ( GBDATA *  _ARB_node )

static

Definition at line 27 of file ps_convert_db.cxx.

References GB_entry(), PG_get_first_probe(), PG_read_probe(), PS_get_first_node(), and PS_get_next_node().

Referenced by main().

PS_NodePtr PS_assert_inverse_path	(	const int	_max_depth,
		const int	_caller_ID,
		IDVector *	_path
	)

Definition at line 48 of file ps_convert_db.cxx.

References __ROOT, and PS_Node::assertChild().

Referenced by PS_extract_probe_data().

PS_NodePtr PS_assert_path	(	const int	_caller_ID,
		IDVector *	_path
	)

Definition at line 70 of file ps_convert_db.cxx.

References __ROOT, and PS_Node::assertChild().

Referenced by PS_extract_probe_data().

void PS_extract_probe_data	(	GBDATA *	_ARB_node,
		int	_max_depth,
		int	_depth,
		const int	_parent_ID,
		IDVector *	_inverse_path
	)

Definition at line 93 of file ps_convert_db.cxx.

References __PROBE_LENGTH, PS_Node::addProbes(), PS_Node::addProbesInverted(), buffer, GB_entry(), GB_read_char_pntr(), NULp, PG_get_first_probe(), PG_get_next_probe(), PG_read_probe(), PS_assert_inverse_path(), PS_assert_path(), PS_get_first_node(), and PS_get_next_node().

Referenced by main().

int main	(	int	_argc,
		char *	_argv[]
	)

Definition at line 189 of file ps_convert_db.cxx.

References __ID2NAME_MAP, __NAME2ID_MAP, error(), GB_await_error(), GB_entry(), GB_export_error(), gb_main, GB_open(), GB_warning(), NULp, PG_initSpeciesMaps(), PG_NumberSpecies(), PS_detect_probe_length(), PS_extract_probe_data(), PS_get_first_node(), PS_get_next_node(), PS_print_time_diff(), and ta.

Variable Documentation

PS_NodePtr __ROOT

static

Definition at line 22 of file ps_convert_db.cxx.

Referenced by PS_assert_inverse_path(), and PS_assert_path().

int __PROBE_LENGTH

static

Definition at line 23 of file ps_convert_db.cxx.

Referenced by PS_extract_probe_data().

SpeciesID __MIN_ID

static

Definition at line 24 of file ps_convert_db.cxx.

SpeciesID __MAX_ID

static

Definition at line 25 of file ps_convert_db.cxx.