Here is a list of all file members with links to the files they belong to:

- b -

backfront_stream() : adlang1.cxx
backgroundResources : GLwDrawA.c
BadPositionsForSpecies : ED4_detect_bad_ali.cxx
BadPositionsForSpeciesConst : ED4_detect_bad_ali.cxx
bakvec_() : eispack.cxx
balanc_() : eispack.cxx
balbak_() : eispack.cxx
bandr_() : eispack.cxx
bandv_() : eispack.cxx
Base : SequenceBuffer.h
base36() : arb_dnarates.cxx
base_2_readable() : probe.h
BASE_A : base.h
BASE_C : base.h
BASE_DEL : base.h
BASE_G : base.h
base_probability() : PT_partition.h
BASE_T : base.h
BASECHARS : base.h
baseCharType : base.c , base.h
baseCmp() : ClustalV.cxx
baseMatch() : ClustalV.cxx , ClustalV.hxx
BASEQUAD : base.h
basesArePairing : base.c , base.h
BaseType : base.h
BASETYPES : base.h
basic_closestatus() : arb_handlers.cxx
basic_openstatus() : arb_handlers.cxx
basic_set_gauge() : arb_handlers.cxx
basic_set_subtitle() : arb_handlers.cxx
basic_set_title() : arb_handlers.cxx
BASIC_TYPEINFO : GDE_menu.h
basic_user_abort() : arb_handlers.cxx
BC_A : SequenceBuffer.h
BC_ALL : SequenceBuffer.h
BC_C : SequenceBuffer.h
BC_COUNTERS : SequenceBuffer.h
BC_G : SequenceBuffer.h
BC_OTHER : SequenceBuffer.h
BC_T : SequenceBuffer.h
bCursorPosDispListCreated : RNA3D_OpenGLEngine.cxx
been_inside_environment() : UnitTester.cxx
before() : insdel.cxx
before_callback_guard() : AWT_db_browser.cxx
BEG_STR1 : aisc_inline.h
BEG_STR2 : aisc_inline.h
beginsWith() : arb_stdstr.h
BEHIND : insdel.h
bEndPosStored : RNA3D_StructureData.cxx
bestki : arb_dnarates.cxx
bestLi : arb_dnarates.cxx
BETA_SHEET : ed4_protein_2nd_structure.hxx
BETA_TURN : ed4_protein_2nd_structure.hxx
BG_PAINT_BOTH : SEC_root.hxx
BG_PAINT_FIRST : SEC_root.hxx
BG_PAINT_NONE : SEC_root.hxx
BG_PAINT_SECOND : SEC_root.hxx
bHelixNrDispListCreated : RNA3D_OpenGLEngine.cxx
bi_assert : BI_basepos.hxx , BI_helix.hxx
BI_helix_check_error() : BI_helix.cxx
BI_helix_free_hash() : BI_helix.cxx
BI_PAIR_TYPE : BI_helix.hxx
BIG_BRANCHES_ALTERNATING : TreeNode.h
BIG_BRANCHES_TO_BOTTOM : TreeNode.h
BIG_BRANCHES_TO_CENTER : TreeNode.h
BIG_BRANCHES_TO_EDGE : TreeNode.h
BIG_BRANCHES_TO_TOP : TreeNode.h
big_pam : ClustalV.cxx
bind_transldef_awars() : SEC_db.cxx
bindAdmin() : MG_alignment.cxx
binop_compare() : adlang1.cxx
binop_contains() : adlang1.cxx
binop_div() : adlang1.cxx
binop_equals() : adlang1.cxx
binop_isAbove() : adlang1.cxx
binop_isBelow() : adlang1.cxx
binop_isEqual() : adlang1.cxx
binop_minus() : adlang1.cxx
binop_mult() : adlang1.cxx
binop_partof() : adlang1.cxx
binop_per_cent() : adlang1.cxx
binop_plus() : adlang1.cxx
binop_rest() : adlang1.cxx
bio2info() : arb_defs.h
bisect_() : eispack.cxx
bit1 : MP_permute.cxx
bit2 : MP_permute.cxx
bit3 : MP_permute.cxx
bit4 : MP_permute.cxx
bit5 : MP_permute.cxx
bit6 : MP_permute.cxx
bit7 : MP_permute.cxx
bit8 : MP_permute.cxx
bitcount() : CT_part.cxx
bitmap_name() : AWT_modules.cxx
BITMASK : adoptimize.cxx
Bitpos : MP_permute.cxx
BITS_FOR_SIZE : PT_prefixtree.cxx
BITS_PER_HEXCHAR : adlang1.cxx
BITS_PER_PELEM : CT_part.cxx
block : ED4_block.cxx
BLOCK : FilteredExport.h
bMapSpDispListCreated : RNA3D_OpenGLEngine.cxx
BO : ClustalV.cxx
BOLD : arb_a2ps.c
BOLD_FONT : aw_def.hxx
bOldInsertionDataExists : RNA3D_StructureData.cxx
bOldSpeciesDataExists : RNA3D_StructureData.cxx
bond_awar_name() : probe_design.cxx
bool_config_changed_cb() : saicalc.cxx
boolchain_gui_changed_cb() : saicalc.cxx
boolchain_rulesAwar_changed_cb() : saicalc.cxx
boolean : ureadseq.h
Boolean : ClustalV.cxx
boolrule_sellst : saicalc.cxx
boolVector : Location.h
boot_ARB() : perlmain_source.c
boot_DynaLoader() : perlmain_source.c
bootstrap_range_changed_cb() : TreeDisplay.cxx
BootstrapStyle : TreeDisplay.hxx
BOTH : AP_buffer.hxx
BOTTOM_WIDGET : aw_window_Xm.hxx
BoundItemSel : items.h
boundloc_changed_cb() : GEN_interface.cxx
BoundTreeAwarCallbackPtr : AWT_TreeAwars.cxx
BoundTreeAwarCallbacks : AWT_TreeAwars.cxx
bqr_() : eispack.cxx
bracket_terminal_spec : ED4_terminal.cxx
BRACKET_WIDTH : ed4_defs.hxx
branch_analysis_config_mapping : NT_branchAnalysis.cxx
BranchStyle : TreeDisplay.hxx
broadcast() : PT_main.cxx , pt_prototypes.h
BROWSE : NT_main.cxx
brute_force_find_next_species() : TreeDisplay.cxx
BS_DIAGONAL : TreeDisplay.hxx
BS_FLOAT : TreeDisplay.hxx
BS_PERCENT : TreeDisplay.hxx
BS_PERCENT_NOSIGN : TreeDisplay.hxx
BS_RECTANGULAR : TreeDisplay.hxx
BSD : arb_a2ps.c
bStartPosStored : RNA3D_StructureData.cxx
buf_size : arb_help2xml.cxx
buffer : arb_help2xml.cxx , seq_search.cxx
BUFFER_ABSOLUTE_ANGLES : SEC_split.cxx
BUFFER_CENTER_RELATIVE : SEC_split.cxx
BUFFER_SIZE : SEC_read.cxx , arb_a2ps.c
BUFFERLENGTH : defs.h
BUFFERSIZE : ED4_cursor.cxx , ED4_terminal.cxx , BufferedFileReader.h , adquery.cxx
bufferTooSmall() : fast_aligner.cxx
BUFSIZE : SaiProbeVisualization.cxx , MG_gene_species.cxx , GDE.cxx , ED4_visualizeSAI.cxx , arb_diff.cxx , arb_msg.cxx , AW_window.cxx
Build2DMipmaps() : glpng.c
build_codon() : AP_codon_table.cxx
build_consensus_tree() : arb_consensus_tree.cxx
build_dict_tree() : adoptimize.cxx
build_GBDATA_path() : adquery.cxx
build_pos_tree() : PT_buildtree.cxx
build_range_gc_number() : AW_preset.cxx
build_RangeList_from_string() : RangeList.cxx , RangeList.h
build_reverse_complement() : fast_aligner.cxx
build_rule_from_AWARs() : saicalc.cxx
build_rule_from_awars() : xfergui.cxx
build_split_id() : NT_split_ali.cxx
build_taxonomy_rek() : adlang1.cxx
buildAllowedValuesString() : adperl.cxx
buildClrTransTabNamesList() : ED4_visualizeSAI.cxx
buildColumnTranslatorFromAwars() : saicalc.cxx
buildMixedCodon() : AP_codon_table.cxx
buildNodeIdentifier() : TreeWrite.cxx
buildSonEdges() : AP_tree_edge.cxx
BUTTON_FONT : aw_def.hxx
BUTTON_GRAPHIC_PADDING : AW_button.cxx
BUTTON_TEXT_X_PADDING : AW_button.cxx
BUTTON_TEXT_Y_PADDING : AW_button.cxx
ButtonPressEventHandler() : RNA3D_Interface.cxx
ButtonReleaseEventHandler() : RNA3D_Interface.cxx
BY_BUTTON : ED4_detect_bad_ali.cxx
BY_CALLING_THE_EDITOR : NT_edconf.cxx
BY_SELECTION : ED4_detect_bad_ali.cxx
bytebitcount() : CT_part.cxx