- a -
- A_TO_I
: gb_load.h
- ABORTED
: mkptypes.cxx
- ABORTED_BY_USER
: NT_main.cxx
- abs
: f2c.h
- ACCEPT_ANY_PARAMS
: gb_aci_impl.h
- ACI
: xferset.cxx
- ACID
: fast_aligner.cxx
- AD_F_ALL
: EXP_interface.cxx
, GEN_interface.cxx
- ADD
: ali_prealigner.cxx
- add_config
: MG_gene_species.cxx
- ADD_LEN
: arb_primer.cxx
- addarg
: macinit.c
- ADMAP_BYTE_ORDER
: admap.cxx
- ADMAP_ID
: gb_map.h
- ADMAP_ID_LEN
: gb_map.h
- ADMAP_VERSION
: gb_map.h
- AF
: ClustalV.cxx
- af_assert
: AP_filter.hxx
- aint
: DNAml_rates_1_0.h
- aisc_assert
: aisc_def.h
, aisc_global.h
, client.c
, server.c
- AISC_ATTR_MASK
: aisc_global.h
- AISC_CASTSIG
: aisc_global.h
- AISC_COMMON
: aisc_global.h
- AISC_DUMP
: trace.h
- AISC_DUMP_SEP
: trace.h
- AISC_INDEX
: aisc_global.h
- AISC_MAGIC_NUMBER
: client_privat.h
- AISC_MAGIC_NUMBER_FILTER
: client.c
, server.c
- AISC_MAX_ATTR
: client_privat.h
- AISC_MAX_STRING_LEN
: client_privat.h
- AISC_MESSAGE_BUFFER_LEN
: client_privat.h
- AISC_NO_ANSWER
: aisc_global.h
- AISC_OBJ_TYPE_MASK
: aisc_global.h
- AISC_SERVER_FAULT
: server.c
- AISC_SERVER_OK
: server.c
- aisc_talking_func_proto_double
: aisc_func_types.h
- aisc_talking_func_proto_long
: aisc_func_types.h
- aisc_talking_func_proto_longp
: aisc_func_types.h
- aisc_talking_func_proto_void
: aisc_func_types.h
- AISC_TYPE_BYTES
: aisc_global.h
- AISC_TYPE_COMMON
: aisc_global.h
- AISC_TYPE_DOUBLE
: aisc_global.h
- AISC_TYPE_INT
: aisc_global.h
- AISC_TYPE_NONE
: aisc_global.h
- AISC_TYPE_STRING
: aisc_global.h
- AISC_VAR_TYPE_MASK
: aisc_global.h
- ALI_A_CODE
: ali_misc.hxx
- ALI_ALIGNER_DEL
: ali_aligner.hxx
- ALI_ALIGNER_INS
: ali_aligner.hxx
- ALI_ALIGNER_MULTI_FLAG
: ali_aligner.hxx
- ALI_ALIGNER_SUB
: ali_aligner.hxx
- ali_assert
: AliAdmin.h
, TranslateRealign.cxx
- ALI_C_CODE
: ali_misc.hxx
- ALI_CONSENSUS
: ali_main.cxx
- ALI_DIAG
: ali_pathmap.hxx
- ALI_DOT_CODE
: ali_misc.hxx
- ALI_ERROR
: ali_main.cxx
- ALI_G_CODE
: ali_misc.hxx
- ALI_GAP_CODE
: ali_misc.hxx
- ALI_INTERVALS
: ali_main.cxx
- ALI_LEFT
: ali_pathmap.hxx
- ALI_LUP
: ali_pathmap.hxx
- ALI_N_CODE
: ali_misc.hxx
- ALI_PREALIGNER_DEL
: ali_prealigner.hxx
- ALI_PREALIGNER_INS
: ali_prealigner.hxx
- ALI_PREALIGNER_MULTI_FLAG
: ali_prealigner.hxx
- ALI_PREALIGNER_SUB
: ali_prealigner.hxx
- ALI_PROFILE_BORDER_LEFT
: ali_profile.hxx
- ALI_PROFILE_BORDER_RIGHT
: ali_profile.hxx
- ALI_U_CODE
: ali_misc.hxx
- ALI_UNDEF
: ali_pathmap.hxx
- ALI_UNDEF_CODE
: ali_misc.hxx
- ALI_UP
: ali_pathmap.hxx
- ALIGN
: admap.cxx
- ALIGN_BITS
: admap.cxx
- ALL
: GDE_def.h
, defs.h
- ALL_DISPLAY_TYPES
: GEN_map.cxx
- ALL_FONTS_ID
: AW_preset.cxx
- ALL_TABLES_MASK
: AP_codon_table.hxx
- ALLOWED_DATES
: gb_main.h
- ALLOWED_KEYS
: gb_main.h
- ALPHA
: glpng.c
- ANY_SETUP
: test_unit.h
- ap_assert
: AP_TreeShader.hxx
, AP_matrix.cxx
, AP_matrix.hxx
, AP_pos_var.cxx
, AP_sequence.hxx
- AP_F_ALL
: AP_Tree.hxx
- AP_F_LOADED
: AP_Tree.hxx
- AP_F_MATRIX
: AP_Tree.hxx
- AP_F_NLOADED
: AP_Tree.hxx
- AP_F_SEQUENCES
: AP_Tree.hxx
- AP_F_TREE
: AP_Tree.hxx
- APIENTRY
: glpng.h
- APPEARS_IN_HEADER
: arb_export_rates.cxx
- appendcbtype
: ad_cb.cxx
- APREFIX_DIFF_SAVE
: ED4_seq_colors.cxx
- APREFIX_DIFF_TEMP
: ED4_seq_colors.cxx
- arb_assert
: arb_assert.h
- arb_assert_backtrace_and_crash
: arb_assert.h
- arb_assert_backtrace_and_stop
: arb_assert.h
- arb_assert_crash
: arb_assert.h
- arb_assert_stop
: arb_assert.h
- ARB_BUILD_DATE
: arb_build.h
- ARB_BUILD_HOST
: arb_build.h
- ARB_BUILD_USER
: arb_build.h
- ARB_BUILD_YEAR
: arb_build.h
- ARB_CHECK_DB_TIMER
: dbserver.cxx
- ARB_CRASH_CODE
: arb_backtrace.h
- arb_forward_list
: arb_forward_list.h
- ARB_GENE_REF
: DBwriter.cxx
- ARB_HIDDEN
: adGene.h
- ARB_INPUT_MASK_ID
: AWT_input_mask.cxx
- ARB_PATH_LOWER_LIMIT
: arb_pathlen.h
- ARB_PATH_MAX
: arb_pathlen.h
- ARB_PATH_UPPER_LIMIT
: arb_pathlen.h
- ARB_SERVE_DB_TIMER
: dbserver.cxx
- ARB_SIGSEGV
: arb_assert.h
- ARB_STOP
: arb_assert.h
- ARB_SVN_BRANCH
: svn_revision.h
- ARB_SVN_BRANCH_IS_TAG
: svn_revision.h
- ARB_SVN_REVISION
: svn_revision.h
- arb_unordered_map
: arb_unordered_map.h
- ARB_VERSION
: arb_build.h
- ARB_VERSION_DETAILED
: arb_build.h
- ARRAY_ELEMS
: arb_defs.h
- ARROW_LENGTH
: ED4_terminal.cxx
- ASS
: SEC_main.cxx
- ASS_EOF
: SEC_main.cxx
- ASS_EOS
: SEC_main.cxx
- ASS_START
: SEC_main.cxx
- assert
: arb_dnarates.cxx
, defines.h
- assert_alphanumeric
: names.cxx
- ASSERT_FALSE
: arb_assert.h
- assert_no_auto_refresh_for
: awt_canvas.hxx
- ASSERT_NO_ERROR
: arb_assert.h
- ASSERT_NONE
: arb_assert.h
- ASSERT_NULL_RESULT
: arb_assert.h
- assert_or_exit
: arb_assert.h
- ASSERT_RESULT
: arb_assert.h
- ASSERT_RESULT_PREDICATE
: arb_assert.h
- ASSERT_TRUE
: arb_assert.h
- ASSERT_VALID_TREE
: TreeNode.h
- ASSERT_VALID_TREE_OR_NULL
: TreeNode.h
- ASSERT_VIA_IS
: static_assert.h
- ASSERTING_CONSTEXPR_INLINE
: arb_assert.h
- ASSERTING_CONSTEXPR_INLINE_Cxx14
: arb_assert.h
- at_assert
: ARB_Tree.hxx
- ATOLPARAM
: trnsprob.h
- ATPL_GC_LOCAL
: AW_preset.cxx
- ATPL_GCMAN_LOCAL
: AW_preset.cxx
- ATTRIBLIST_SIZE
: GLwDrawA.c
- AUTHOR
: defs.h
- AUTO_FLUSH
: aw_device.hxx
- AUTODETECT_STARTPOS
: TranslateRealign.h
- av_assert
: AliView.cxx
- aw_assert
: aw_position.hxx
, aw_rgb.hxx
, aw_root.hxx
, aw_scalar.hxx
, AW_xkey.cxx
- aw_awar_name_height
: AW_window.cxx
- aw_awar_name_posx
: AW_window.cxx
- aw_awar_name_posy
: AW_window.cxx
- aw_awar_name_reset
: AW_window.cxx
- aw_awar_name_width
: AW_window.cxx
- AW_CALC_OFFSET_ON_EXPOSE
: aw_window_Xm.hxx
- AW_COLOR_GROUP_NAME_LEN
: aw_color_groups.hxx
- AW_COLOR_GROUP_PREFIX
: aw_color_groups.hxx
- AW_COLOR_GROUPS
: aw_color_groups.hxx
- AW_EST_BUFFER
: AW_status.cxx
- AW_FILE_SELECT_BASE
: AW_modal.cxx
- AW_FILE_SELECT_DIR_AWAR
: AW_modal.cxx
- AW_FILE_SELECT_FILE_AWAR
: AW_modal.cxx
- AW_FILE_SELECT_FILTER_AWAR
: AW_modal.cxx
- AW_FILE_SELECT_TITLE_AWAR
: AW_modal.cxx
- AW_FONT_GROUP_MAX_GC
: aw_font_group.hxx
- AW_FONTINFO_CHAR_ASCII_MAX
: aw_common.hxx
- AW_FONTINFO_CHAR_ASCII_MIN
: aw_common.hxx
- AW_GAUGE_GRANULARITY
: AW_status.cxx
- AW_GAUGE_SIZE
: AW_status.cxx
- AW_HEADER_MAIN
: aw_window.hxx
- AW_INPUT_AWAR
: AW_modal.cxx
- AW_INPUT_TITLE_AWAR
: AW_modal.cxx
- AW_INT
: aw_device.hxx
- AW_JUSTIFY_LABEL
: aw_window_Xm.hxx
- AW_MAX_MENU_DEEP
: aw_window_Xm.hxx
- AW_MESSAGE_LINES
: AW_status.cxx
- AW_MESSAGE_LISTEN_DELAY
: aw_window_Xm.hxx
- AW_MESSAGE_TIME
: aw_window.hxx
- AW_MOTIF_LABEL
: aw_window_Xm.hxx
- AW_NO_COLOR
: aw_base.hxx
- AW_PLANAR_COLORS
: aw_color_groups.hxx
- AW_RANGE_COLORS
: aw_color_groups.hxx
- AW_RENAME_SKIP_GUI
: DBwriter.cxx
, GenomeImport.cxx
- AW_ROOT_DEFAULT
: aw_base.hxx
- AW_SCROLL_MAX
: aw_window_Xm.hxx
- AW_SPATIAL_COLORS
: aw_color_groups.hxx
- AW_STATUS_HIDE_DELAY
: AW_status.cxx
- AW_STATUS_KILL_DELAY
: AW_status.cxx
- AW_STATUS_LISTEN_DELAY
: AW_status.cxx
- AW_STATUS_PIPE_CHECK_DELAY
: AW_status.cxx
- AWAR_3D_23S_RRNA_MOL
: RNA3D_Global.hxx
- AWAR_3D_BASES_HELIX
: RNA3D_Global.hxx
- AWAR_3D_BASES_MODE
: RNA3D_Global.hxx
- AWAR_3D_BASES_NON_HELIX
: RNA3D_Global.hxx
- AWAR_3D_BASES_UNPAIRED_HELIX
: RNA3D_Global.hxx
- AWAR_3D_CURSOR_POSITION
: RNA3D_Global.hxx
- AWAR_3D_DISPLAY_BASES
: RNA3D_Global.hxx
- AWAR_3D_DISPLAY_HELIX
: RNA3D_Global.hxx
- AWAR_3D_DISPLAY_MASK
: RNA3D_Global.hxx
- AWAR_3D_DISPLAY_SIZE
: RNA3D_Global.hxx
- AWAR_3D_DISPLAY_TERTIARY_INTRACTIONS
: RNA3D_Global.hxx
- AWAR_3D_HELIX_BACKBONE
: RNA3D_Global.hxx
- AWAR_3D_HELIX_FROM
: RNA3D_Global.hxx
- AWAR_3D_HELIX_MIDPOINT
: RNA3D_Global.hxx
- AWAR_3D_HELIX_NUMBER
: RNA3D_Global.hxx
- AWAR_3D_HELIX_SIZE
: RNA3D_Global.hxx
- AWAR_3D_HELIX_TO
: RNA3D_Global.hxx
- AWAR_3D_MAP_ENABLE
: RNA3D_Global.hxx
- AWAR_3D_MAP_SAI
: RNA3D_Global.hxx
- AWAR_3D_MAP_SEARCH_STRINGS
: RNA3D_Global.hxx
- AWAR_3D_MAP_SPECIES
: RNA3D_Global.hxx
- AWAR_3D_MAP_SPECIES_DISP_BASE
: RNA3D_Global.hxx
- AWAR_3D_MAP_SPECIES_DISP_DELETIONS
: RNA3D_Global.hxx
- AWAR_3D_MAP_SPECIES_DISP_INSERTIONS
: RNA3D_Global.hxx
- AWAR_3D_MAP_SPECIES_DISP_INSERTIONS_INFO
: RNA3D_Global.hxx
- AWAR_3D_MAP_SPECIES_DISP_MISSING
: RNA3D_Global.hxx
- AWAR_3D_MAP_SPECIES_DISP_POS
: RNA3D_Global.hxx
- AWAR_3D_MOL_BACKBONE
: RNA3D_Global.hxx
- AWAR_3D_MOL_COLORIZE
: RNA3D_Global.hxx
- AWAR_3D_MOL_DISP_POS
: RNA3D_Global.hxx
- AWAR_3D_MOL_POS_INTERVAL
: RNA3D_Global.hxx
- AWAR_3D_MOL_ROTATE
: RNA3D_Global.hxx
- AWAR_3D_MOL_SIZE
: RNA3D_Global.hxx
- AWAR_3D_SAI_SELECTED
: RNA3D_Global.hxx
- AWAR_3D_SELECTED_SPECIES
: RNA3D_Global.hxx
- AWAR_3D_SHAPES_HELIX
: RNA3D_Global.hxx
- AWAR_3D_SHAPES_NON_HELIX
: RNA3D_Global.hxx
- AWAR_3D_SHAPES_UNPAIRED_HELIX
: RNA3D_Global.hxx
- AWAR_ACI
: field_shader.cxx
- AWAR_ADDID_DST
: MG_names.cxx
- AWAR_ADDID_MATCH
: MG_names.cxx
- AWAR_ADDID_SRC
: MG_names.cxx
- AWAR_ADVICE_DISABLED
: AW_advice.cxx
- AWAR_ADVICE_SHOWN
: AW_advice.cxx
- AWAR_ADVICE_TEXT
: AW_advice.cxx
- AWAR_ADVICE_TMP
: AW_advice.cxx
- AWAR_ADVICE_UNDERSTOOD
: AW_advice.cxx
- AWAR_ALIGNMENT
: ap_main.hxx
- AWAR_ALLOW_DUPS
: MG_names.cxx
- AWAR_APPEND
: MG_species.cxx
- AWAR_APRINT
: awt_asciiprint.hxx
- AWAR_APRINT_DX
: awt_asciiprint.hxx
- AWAR_APRINT_DY
: awt_asciiprint.hxx
- AWAR_APRINT_FILE
: awt_asciiprint.hxx
- AWAR_APRINT_MAGNIFICATION
: awt_asciiprint.hxx
- AWAR_APRINT_ORIENTATION
: awt_asciiprint.hxx
- AWAR_APRINT_PAGES
: awt_asciiprint.hxx
- AWAR_APRINT_PAPER_SIZE
: awt_asciiprint.hxx
- AWAR_APRINT_PRINTER
: awt_asciiprint.hxx
- AWAR_APRINT_PRINTTO
: awt_asciiprint.hxx
- AWAR_APRINT_SX
: awt_asciiprint.hxx
- AWAR_APRINT_SY
: awt_asciiprint.hxx
- AWAR_APRINT_TEXT
: awt_asciiprint.hxx
- AWAR_APRINT_TITLE
: awt_asciiprint.hxx
- AWAR_ARB_TREE_RENAMED
: aw_global_awars.hxx
- AWAR_AW_FOCUS_FOLLOWS_MOUSE
: aw_global_awars.hxx
- AWAR_AWM_MASK
: aw_awar_defs.hxx
- AWAR_BA_AUTOMARK_FORMAT
: NT_branchAnalysis.cxx
- AWAR_BA_DEGENERATION
: NT_branchAnalysis.cxx
- AWAR_BA_MIN_ABS_DIFF
: NT_branchAnalysis.cxx
- AWAR_BA_MIN_DEPTH
: NT_branchAnalysis.cxx
- AWAR_BA_MIN_REL_DIFF
: NT_branchAnalysis.cxx
- AWAR_BA_MIN_ROOTDIST
: NT_branchAnalysis.cxx
- AWAR_BADALI_BASE
: ED4_detect_bad_ali.cxx
- AWAR_BADALI_FIELD
: ED4_detect_bad_ali.cxx
- AWAR_BADALI_HELIXLIST
: ED4_detect_bad_ali.cxx
- AWAR_BADALI_SPECIES
: ED4_detect_bad_ali.cxx
- AWAR_BADALI_SYMBOLS
: ED4_detect_bad_ali.cxx
- AWAR_BADALI_TEMP
: ED4_detect_bad_ali.cxx
- AWAR_BEST_PARSIMONY
: ap_main.hxx
- AWAR_BRANCH_ANALYSIS
: NT_branchAnalysis.cxx
- AWAR_BRANCH_ANALYSIS_TMP
: NT_branchAnalysis.cxx
- AWAR_CANIO
: AWT_canio.cxx
- AWAR_CANIO_BORDERSIZE
: AWT_canio.cxx
- AWAR_CANIO_CLIP
: AWT_canio.cxx
- AWAR_CANIO_COLOR
: AWT_canio.cxx
- AWAR_CANIO_DEST
: AWT_canio.cxx
- AWAR_CANIO_F2DBUG
: AWT_canio.cxx
- AWAR_CANIO_FILE_BASE
: AWT_canio.cxx
- AWAR_CANIO_FILE_DIR
: AWT_canio.cxx
- AWAR_CANIO_FILE_FILTER
: AWT_canio.cxx
- AWAR_CANIO_FILE_NAME
: AWT_canio.cxx
- AWAR_CANIO_GFX_SX
: AWT_canio.cxx
- AWAR_CANIO_GFX_SY
: AWT_canio.cxx
- AWAR_CANIO_HANDLES
: AWT_canio.cxx
- AWAR_CANIO_LANDSCAPE
: AWT_canio.cxx
- AWAR_CANIO_MAGNIFICATION
: AWT_canio.cxx
- AWAR_CANIO_OUT_SX
: AWT_canio.cxx
- AWAR_CANIO_OUT_SY
: AWT_canio.cxx
- AWAR_CANIO_OVERLAP
: AWT_canio.cxx
- AWAR_CANIO_OVERLAP_PERCENT
: AWT_canio.cxx
- AWAR_CANIO_OVERLAP_WANTED
: AWT_canio.cxx
- AWAR_CANIO_PAGE_SX
: AWT_canio.cxx
- AWAR_CANIO_PAGE_SY
: AWT_canio.cxx
- AWAR_CANIO_PAGELOCK
: AWT_canio.cxx
- AWAR_CANIO_PAGES
: AWT_canio.cxx
- AWAR_CANIO_PAPER
: AWT_canio.cxx
- AWAR_CANIO_PAPER_SX
: AWT_canio.cxx
- AWAR_CANIO_PAPER_SY
: AWT_canio.cxx
- AWAR_CANIO_PAPER_USABLE
: AWT_canio.cxx
- AWAR_CANIO_PRINTER
: AWT_canio.cxx
- AWAR_CANIO_TMP
: AWT_canio.cxx
- AWAR_CHANGE_DUMP
: AW_awar.cxx
- AWAR_CHECK
: MG_checkfield.cxx
- AWAR_CL_DISPLAY_CONFIG_MARKERS
: NT_edconf.cxx
- AWAR_CL_SELECTED_CONFIGS
: NT_edconf.cxx
- AWAR_CLUSTER_AUTOMARK
: DI_clusters.cxx
- AWAR_CLUSTER_GROUP_EXAMPLE
: DI_clusters.cxx
- AWAR_CLUSTER_GROUP_EXISTING
: DI_clusters.cxx
- AWAR_CLUSTER_GROUP_IDENTITY
: DI_clusters.cxx
- AWAR_CLUSTER_GROUP_NOTFOUND
: DI_clusters.cxx
- AWAR_CLUSTER_GROUP_PARTSEP
: DI_clusters.cxx
- AWAR_CLUSTER_GROUP_PREFIX
: DI_clusters.cxx
- AWAR_CLUSTER_GROUP_PREFIX_MATCH
: DI_clusters.cxx
- AWAR_CLUSTER_GROUP_SUFFIX
: DI_clusters.cxx
- AWAR_CLUSTER_GROUP_WHAT
: DI_clusters.cxx
- AWAR_CLUSTER_GRP_PREFIX
: DI_clusters.cxx
- AWAR_CLUSTER_GRP_PREFIX_TMP
: DI_clusters.cxx
- AWAR_CLUSTER_MARKREP
: DI_clusters.cxx
- AWAR_CLUSTER_MAXDIST
: DI_clusters.cxx
- AWAR_CLUSTER_MINSIZE
: DI_clusters.cxx
- AWAR_CLUSTER_ORDER
: DI_clusters.cxx
- AWAR_CLUSTER_PREFIX
: DI_clusters.cxx
- AWAR_CLUSTER_PREFIX_TEMP
: DI_clusters.cxx
- AWAR_CLUSTER_RESTORE_LABEL
: DI_clusters.cxx
- AWAR_CLUSTER_SELECTED
: DI_clusters.cxx
- AWAR_CLUSTER_SELECTREP
: DI_clusters.cxx
- AWAR_COLOR_GROUPS_PREFIX
: AW_preset.cxx
- AWAR_COLOR_GROUPS_USE
: AW_preset.cxx
- AWAR_COLOR_LOADSAVE_NAME
: db_query.cxx
- AWAR_COLORIZE
: db_query.cxx
- AWAR_COLUMNSTAT_BASE
: PARS_main.cxx
- AWAR_COLUMNSTAT_NAME
: PARS_main.cxx
- AWAR_COMBINED_EXPERIMENT_NAME
: EXP_local.hxx
- AWAR_COMBINED_GENE_NAME
: GEN_local.hxx
- AWAR_COMPARE_FIELD
: MG_checkfield.cxx
- AWAR_CON_ALIGNMENT_SEPARATOR
: NT_concatenate.cxx
- AWAR_CON_ALLOW_OVERWRITE_ALI
: NT_concatenate.cxx
- AWAR_CON_INSGAPS_FOR_MISS_ALIS
: NT_concatenate.cxx
- AWAR_CON_MERGE_FIELD
: NT_concatenate.cxx
- AWAR_CON_NEW_ALIGNMENT_NAME
: NT_concatenate.cxx
- AWAR_CON_SELECTED_ALI
: NT_concatenate.cxx
- AWAR_CON_SEQUENCE_TYPE
: NT_concatenate.cxx
- AWAR_CON_STORE_SIM_SP_NO
: NT_concatenate.cxx
- AWAR_CONFIG_COMMENT
: NT_edconf.cxx
- AWAR_CONFIG_NAME
: MG_configs.cxx
- AWAR_CONFIG_NAME_DST
: MG_configs.cxx
- AWAR_CONFIG_NAME_SRC
: MG_configs.cxx
- AWAR_CONFIGURATION
: aw_awar_defs.hxx
- AWAR_CONSENSUS_ALIGNMENT
: AP_consensus.cxx
- AWAR_CONSENSUS_CONSIDBOUND
: AP_consensus.cxx
- AWAR_CONSENSUS_COUNTGAPS
: AP_consensus.cxx
- AWAR_CONSENSUS_GAPBOUND
: AP_consensus.cxx
- AWAR_CONSENSUS_GROUP
: AP_consensus.cxx
- AWAR_CONSENSUS_LOWER
: AP_consensus.cxx
- AWAR_CONSENSUS_MARKED_ONLY
: AP_consensus.cxx
- AWAR_CONSENSUS_NAME
: AP_consensus.cxx
- AWAR_CONSENSUS_PREFIX
: AP_consensus.cxx
- AWAR_CONSENSUS_PREFIX_TMP
: AP_consensus.cxx
- AWAR_CONSENSUS_UPPER
: AP_consensus.cxx
- AWAR_CORRECT
: MG_checkfield.cxx
- AWAR_CS2GP
: ColumnStat_2_gnuplot.cxx
- AWAR_CS2GP_DIRECTORY
: ColumnStat_2_gnuplot.cxx
- AWAR_CS2GP_FILENAME
: ColumnStat_2_gnuplot.cxx
- AWAR_CS2GP_FILTER_NAME
: ColumnStat_2_gnuplot.cxx
- AWAR_CS2GP_GNUPLOT_OVERLAY_POSTFIX
: ColumnStat_2_gnuplot.cxx
- AWAR_CS2GP_GNUPLOT_OVERLAY_PREFIX
: ColumnStat_2_gnuplot.cxx
- AWAR_CS2GP_NAME
: ColumnStat_2_gnuplot.cxx
- AWAR_CS2GP_SMOOTH_GNUPLOT
: ColumnStat_2_gnuplot.cxx
- AWAR_CS2GP_SMOOTH_VALUES
: ColumnStat_2_gnuplot.cxx
- AWAR_CS2GP_SUFFIX
: ColumnStat_2_gnuplot.cxx
- AWAR_CURSOR_POSITION
: aw_awar_defs.hxx
- AWAR_CURSOR_POSITION_LOCAL
: aw_awar_defs.hxx
- AWAR_CV_B
: AW_preset.cxx
- AWAR_CV_G
: AW_preset.cxx
- AWAR_CV_H
: AW_preset.cxx
- AWAR_CV_R
: AW_preset.cxx
- AWAR_CV_S
: AW_preset.cxx
- AWAR_CV_V
: AW_preset.cxx
- AWAR_DB_COMMENT
: aw_awar_defs.hxx
- AWAR_DB_COMPRESSION
: NT_extern.cxx
- AWAR_DB_DIRECTORY
: NT_main.cxx
- AWAR_DB_DST
: merge.hxx
- AWAR_DB_FILTER
: NT_main.cxx
- AWAR_DB_NAME
: aw_awar_defs.hxx
- AWAR_DB_OPTI_TREENAME
: NT_extern.cxx
- AWAR_DB_PATH
: aw_awar_defs.hxx
- AWAR_DB_SRC
: merge.hxx
- AWAR_DB_TYPE
: NT_extern.cxx
- AWAR_DBBASE
: aw_awar_defs.hxx
- AWAR_DEFAULT_ALIGNMENT
: aw_awar_defs.hxx
- AWAR_DIFF_GAPTYPES
: ED4_seq_colors.cxx
- AWAR_DIFF_MINDCASE
: ED4_seq_colors.cxx
- AWAR_DIFF_MINDGAPTYPE
: ED4_seq_colors.cxx
- AWAR_DIFF_NAME
: ED4_seq_colors.cxx
- AWAR_DIFF_TYPE
: ED4_seq_colors.cxx
- AWAR_DIM_ACTIVE
: field_shader.cxx
- AWAR_DIST_ALIGNMENT
: di_awars.hxx
- AWAR_DIST_BOOTSTRAP_COUNT
: DI_matr.cxx
- AWAR_DIST_CANCEL_CHARS
: DI_matr.cxx
- AWAR_DIST_COLUMN_STAT_NAME
: DI_matr.cxx
- AWAR_DIST_COLUMN_STAT_PREFIX
: di_awars.hxx
- AWAR_DIST_CORR_TRANS
: di_matr.hxx
- AWAR_DIST_DIST_PREFIX
: di_matr.hxx
- AWAR_DIST_FILTER_ALIGNMENT
: di_awars.hxx
- AWAR_DIST_FILTER_FILTER
: di_awars.hxx
- AWAR_DIST_FILTER_NAME
: di_awars.hxx
- AWAR_DIST_FILTER_PREFIX
: di_awars.hxx
- AWAR_DIST_FILTER_SIMPLIFY
: di_awars.hxx
- AWAR_DIST_MATRIX_AUTO_CALC_TREE
: DI_matr.cxx
- AWAR_DIST_MATRIX_AUTO_RECALC
: DI_matr.cxx
- AWAR_DIST_MATRIX_DNA_BASE
: di_awars.hxx
- AWAR_DIST_MATRIX_DNA_ENABLED
: di_awars.hxx
- AWAR_DIST_MAX_DIST
: di_matr.hxx
- AWAR_DIST_MIN_DIST
: di_matr.hxx
- AWAR_DIST_PREFIX
: di_awars.hxx
, di_matr.hxx
- AWAR_DIST_SAVE_MATRIX_BASE
: di_matr.hxx
- AWAR_DIST_SAVE_MATRIX_FILENAME
: DI_matr.cxx
- AWAR_DIST_SAVE_MATRIX_TYPE
: DI_matr.cxx
- AWAR_DIST_TREE_COMP_NAME
: DI_matr.cxx
- AWAR_DIST_TREE_CURR_NAME
: di_awars.hxx
- AWAR_DIST_TREE_PREFIX
: di_awars.hxx
- AWAR_DIST_TREE_SORT_NAME
: DI_matr.cxx
- AWAR_DIST_TREE_STD_NAME
: DI_matr.cxx
- AWAR_DIST_WHICH_SPECIES
: di_awars.hxx
- AWAR_DOT_BASE
: ED4_dots.cxx
- AWAR_DOT_MARKED
: ED4_dots.cxx
- AWAR_DOT_SAI
: ED4_dots.cxx
- AWAR_DOT_SAI_CHARS
: ED4_dots.cxx
- AWAR_DTREE_ATTACH_GROUP
: TreeDisplay.hxx
- AWAR_DTREE_ATTACH_LEN
: TreeDisplay.hxx
- AWAR_DTREE_ATTACH_SIZE
: TreeDisplay.hxx
- AWAR_DTREE_AUTO_JUMP
: TreeDisplay.hxx
- AWAR_DTREE_AUTO_JUMP_TREE
: TreeDisplay.hxx
- AWAR_DTREE_AUTO_UNFOLD
: TreeDisplay.hxx
- AWAR_DTREE_BASELINEWIDTH
: TreeDisplay.hxx
- AWAR_DTREE_BOOTSTRAP_MAX
: TreeDisplay.hxx
- AWAR_DTREE_BOOTSTRAP_MIN
: TreeDisplay.hxx
- AWAR_DTREE_BOOTSTRAP_SHOW
: TreeDisplay.hxx
- AWAR_DTREE_BOOTSTRAP_STYLE
: TreeDisplay.hxx
- AWAR_DTREE_BRANCH_STYLE
: TreeDisplay.hxx
- AWAR_DTREE_CIRCLE_ELLIPSE
: TreeDisplay.hxx
- AWAR_DTREE_CIRCLE_FILL
: TreeDisplay.hxx
- AWAR_DTREE_CIRCLE_LIMIT
: TreeDisplay.hxx
- AWAR_DTREE_CIRCLE_SHOW
: TreeDisplay.hxx
- AWAR_DTREE_CIRCLE_ZOOM
: TreeDisplay.hxx
- AWAR_DTREE_DENDRO_XPAD
: TreeDisplay.hxx
- AWAR_DTREE_DENDRO_ZOOM_TEXT
: TreeDisplay.hxx
- AWAR_DTREE_GREY_LEVEL
: TreeDisplay.hxx
- AWAR_DTREE_GROUP_DOWNSCALE
: TreeDisplay.hxx
- AWAR_DTREE_GROUP_MARKED_THRESHOLD
: TreeDisplay.hxx
- AWAR_DTREE_GROUP_ORIENT
: TreeDisplay.hxx
- AWAR_DTREE_GROUP_PARTIALLY_MARKED_THRESHOLD
: TreeDisplay.hxx
- AWAR_DTREE_GROUP_SCALE
: TreeDisplay.hxx
- AWAR_DTREE_GROUP_STYLE
: TreeDisplay.hxx
- AWAR_DTREE_GROUPCOUNTMODE
: TreeDisplay.hxx
- AWAR_DTREE_GROUPINFOPOS
: TreeDisplay.hxx
- AWAR_DTREE_MARKER_WIDTH
: TreeDisplay.hxx
- AWAR_DTREE_PARTIAL_GREYLEVEL
: TreeDisplay.hxx
- AWAR_DTREE_RADIAL_XPAD
: TreeDisplay.hxx
- AWAR_DTREE_RADIAL_ZOOM_TEXT
: TreeDisplay.hxx
- AWAR_DTREE_SHOW_BRACKETS
: TreeDisplay.hxx
- AWAR_DTREE_VERICAL_DIST
: TreeDisplay.hxx
- AWAR_DUP_EXCLUDED_WORDS
: NT_group_search.cxx
- AWAR_DUP_IGNORE_CASE
: NT_group_search.cxx
- AWAR_DUP_MIN_CLUSTER_SIZE
: NT_group_search.cxx
- AWAR_DUP_MIN_WORDS
: NT_group_search.cxx
- AWAR_DUP_NAME_MATCH
: NT_group_search.cxx
- AWAR_DUP_TREE_MODE
: NT_group_search.cxx
- AWAR_DUP_WORD_SEPARATORS
: NT_group_search.cxx
- AWAR_DUPLICATE_MODE
: NT_group_search.cxx
- AWAR_EDIT_BASE_POSITION
: ed4_defs.hxx
- AWAR_EDIT_CONFIGURATION
: ed4_defs.hxx
- AWAR_EDIT_ECOLI_POSITION
: ed4_defs.hxx
- AWAR_EDIT_HELIX_SPACING
: ed4_defs.hxx
- AWAR_EDIT_HELIXNR
: ed4_defs.hxx
- AWAR_EDIT_IUPAC
: ed4_defs.hxx
- AWAR_EDIT_MODE
: ed4_defs.hxx
- AWAR_EDIT_RIGHTWARD
: ed4_extern.hxx
- AWAR_EDIT_SECURITY_LEVEL
: ed4_defs.hxx
- AWAR_EDIT_SECURITY_LEVEL_ALIGN
: ed4_defs.hxx
- AWAR_EDIT_SECURITY_LEVEL_CHANGE
: ed4_defs.hxx
- AWAR_EDIT_SEQ_POSITION
: ed4_defs.hxx
- AWAR_EDIT_TERMINAL_SPACING
: ed4_defs.hxx
- AWAR_EDIT_TITLE_MODE
: ed4_defs.hxx
- AWAR_EPS
: AW_awar.cxx
- AWAR_ERROR_MESSAGES
: aw_awar_defs.hxx
- AWAR_ETAG
: MG_checkfield.cxx
- AWAR_EX_NAME
: MG_extendeds.cxx
- AWAR_EX_NAME_DST
: MG_extendeds.cxx
- AWAR_EX_NAME_SRC
: MG_extendeds.cxx
- AWAR_EXCLUDE
: MG_checkfield.cxx
- AWAR_EXPERIMENT_NAME
: EXP.hxx
- AWAR_EXPERT
: aw_awar_defs.hxx
- AWAR_EXPORT_COMPRESS
: awti_exp_local.hxx
- AWAR_EXPORT_CUTSTOP
: awti_exp_local.hxx
- AWAR_EXPORT_FILEBASE
: awti_exp_local.hxx
- AWAR_EXPORT_FILENAME
: awti_exp_local.hxx
- AWAR_EXPORT_FILESUFFIX
: awti_exp_local.hxx
- AWAR_EXPORT_FILTER_NAME
: awti_exp_local.hxx
- AWAR_EXPORT_FORMAT_DESC
: awti_exp_local.hxx
- AWAR_EXPORT_FORMATBASE
: awti_exp_local.hxx
- AWAR_EXPORT_FORMATNAME
: awti_exp_local.hxx
- AWAR_EXPORT_FTS
: awti_exp_local.hxx
- AWAR_EXPORT_MARKED
: awti_exp_local.hxx
- AWAR_EXPORT_MULTIPLE_FILES
: awti_exp_local.hxx
- AWAR_EXPORT_NDS
: NT_extern.cxx
- AWAR_EXPORT_NDS_SEPARATOR
: NT_extern.cxx
- AWAR_FIELD
: field_shader.cxx
- AWAR_FIELD_CHOSEN
: ed4_defs.hxx
- AWAR_FIELD_CONVERT_SOURCE_TMPL
: ui_species.cxx
- AWAR_FIELD_CONVERT_TYPE_TMPL
: ui_species.cxx
- AWAR_FIELD_CREATE_NAME_TMPL
: ui_species.cxx
- AWAR_FIELD_CREATE_TYPE_TMPL
: ui_species.cxx
- AWAR_FIELD_DELETE_TMPL
: ui_species.cxx
- AWAR_FIELD_DST
: MG_species.cxx
- AWAR_FIELD_REORDER_DEST_TMPL
: ui_species.cxx
- AWAR_FIELD_REORDER_ORDER
: ui_species.cxx
- AWAR_FIELD_REORDER_SOURCE_TMPL
: ui_species.cxx
- AWAR_FIELD_SRC
: MG_species.cxx
- AWAR_FILTER_NAME
: ap_main.hxx
- AWAR_FLAG_ENABLE_TEMPLATE
: ED4_flags.cxx
- AWAR_FLAG_FIELD_TEMPLATE
: ED4_flags.cxx
- AWAR_FLAG_HEADER_TEMPLATE
: ED4_flags.cxx
- AWAR_FLAG_PREFIX_TEMPLATE
: ED4_flags.cxx
- AWAR_FLAGS_ENABLED
: ED4_flags.cxx
- AWAR_FLAGS_PREFIX
: ED4_flags.cxx
- AWAR_FOOTER
: aw_awar_defs.hxx
- AWAR_FOOTER_MAX_LEN
: aw_awar_defs.hxx
- AWAR_GDE_ALIGNMENT
: GDE.cxx
- AWAR_GDE_COMPRESSION
: GDE_awars.h
- AWAR_GDE_CUTOFF_STOPCODON
: GDE_awars.h
- AWAR_GDE_EXPORT_FILTER
: aw_awar_defs.hxx
- AWAR_GDE_FILTER
: aw_awar_defs.hxx
- AWAR_GDE_FILTER_NAME
: GDE.cxx
- AWAR_GDE_SPECIES
: GDE_awars.h
- AWAR_GENE_CONTENT
: aw_awar_defs.hxx
- AWAR_GENE_DEST
: GEN_interface.cxx
- AWAR_GENE_NAME
: GEN.hxx
- AWAR_GENMAP_ARROW_SIZE
: GEN_local.hxx
- AWAR_GENMAP_AUTO_JUMP
: GEN_local.hxx
- AWAR_GENMAP_BOOK_BASES_PER_LINE
: GEN_local.hxx
- AWAR_GENMAP_BOOK_LINE_HEIGHT
: GEN_local.hxx
- AWAR_GENMAP_BOOK_LINE_SPACE
: GEN_local.hxx
- AWAR_GENMAP_BOOK_WIDTH_FACTOR
: GEN_local.hxx
- AWAR_GENMAP_DISPLAY_TYPE
: GEN_local.hxx
- AWAR_GENMAP_RADIAL_INSIDE
: GEN_local.hxx
- AWAR_GENMAP_RADIAL_OUTSIDE
: GEN_local.hxx
- AWAR_GENMAP_SHOW_ALL_NDS
: GEN_local.hxx
- AWAR_GENMAP_SHOW_HIDDEN
: GEN_local.hxx
- AWAR_GENMAP_VERTICAL_FACTOR_X
: GEN_local.hxx
- AWAR_GENMAP_VERTICAL_FACTOR_Y
: GEN_local.hxx
- AWAR_GROUP
: ad_trees.h
- AWAR_GROUP_HIT_COUNT
: NT_group_search.cxx
- AWAR_GROUPXFER_ACI
: ad_trees.cxx
- AWAR_GROUPXFER_INGROUP_ABS
: ad_trees.cxx
- AWAR_GROUPXFER_INGROUP_LIM
: ad_trees.cxx
- AWAR_GROUPXFER_INGROUP_REL
: ad_trees.cxx
- AWAR_GROUPXFER_KEELING
: ad_trees.cxx
- AWAR_GROUPXFER_OUTGROUP_ABS
: ad_trees.cxx
- AWAR_GROUPXFER_OUTGROUP_LIM
: ad_trees.cxx
- AWAR_GROUPXFER_OUTGROUP_REL
: ad_trees.cxx
- AWAR_GROUPXFER_OVERWRITE_MODE
: ad_trees.cxx
- AWAR_GROUPXFER_SAV
: ad_trees.cxx
- AWAR_GROUPXFER_SOURCE
: ad_trees.cxx
- AWAR_GROUPXFER_UNKNOWN_ABS
: ad_trees.cxx
- AWAR_GUI_OVERLAY_GROUPS
: item_shader.cxx
- AWAR_GUI_OVERLAY_MARKED
: item_shader.cxx
- AWAR_GUI_PHASE_ALTER
: item_shader.cxx
- AWAR_GUI_PHASE_FREQ
: item_shader.cxx
- AWAR_GUI_PHASE_POSTSHIFT
: item_shader.cxx
- AWAR_GUI_PHASE_PRESHIFT
: item_shader.cxx
- AWAR_GUI_RANGE
: item_shader.cxx
- AWAR_HELIX_ENABLE
: AW_helix.cxx
- AWAR_HELIX_NAME
: aw_awar_defs.hxx
- AWAR_HELIX_REFRESH
: AW_helix.cxx
- AWAR_HELP
: AW_help.cxx
- AWAR_HELPFILE
: AW_help.cxx
- AWAR_HELPSEARCH
: AW_help.cxx
- AWAR_HELPTEXT
: AW_help.cxx
- AWAR_IMPORT_ALI
: awti_imp_local.hxx
- AWAR_IMPORT_ALI_PROTECTION
: awti_imp_local.hxx
- AWAR_IMPORT_ALI_TYPE
: awti_imp_local.hxx
- AWAR_IMPORT_AUTOCONF
: awti_import.hxx
- AWAR_IMPORT_FILEBASE
: awti_imp_local.hxx
- AWAR_IMPORT_FILENAME
: awti_imp_local.hxx
- AWAR_IMPORT_FORMAT_DESC
: awti_imp_local.hxx
- AWAR_IMPORT_FORMATBASE
: awti_imp_local.hxx
- AWAR_IMPORT_FORMATDIR
: awti_imp_local.hxx
- AWAR_IMPORT_FORMATFILTER
: awti_imp_local.hxx
- AWAR_IMPORT_FORMATNAME
: awti_imp_local.hxx
- AWAR_IMPORT_FTS
: awti_imp_local.hxx
- AWAR_IMPORT_GENOM_DB
: awti_import.hxx
- AWAR_IMPORT_PREFIX
: awti_import.hxx
- AWAR_IMPORT_TMP_PREFIX
: awti_import.hxx
- AWAR_INFO_BUTTON_TEXT
: aw_awar_defs.hxx
- AWAR_INPUT_INITIALS
: NT_validManual.cxx
- AWAR_INPUT_MASK_BASE
: AWT_input_mask.cxx
- AWAR_INPUT_MASK_HIDDEN
: AWT_input_mask.cxx
- AWAR_INPUT_MASK_ITEM
: AWT_input_mask.cxx
- AWAR_INPUT_MASK_NAME
: AWT_input_mask.cxx
- AWAR_INPUT_MASK_SCOPE
: AWT_input_mask.cxx
- AWAR_INPUT_MASKS_EDIT_ENABLED
: AWT_input_mask.cxx
- AWAR_INSDEL
: NT_ins_col.cxx
- AWAR_INSDEL_AFFECTED
: NT_ins_col.cxx
- AWAR_INSDEL_AMOUNT
: NT_ins_col.cxx
- AWAR_INSDEL_CONTAINS
: NT_ins_col.cxx
- AWAR_INSDEL_DELETABLE
: NT_ins_col.cxx
- AWAR_INSDEL_DIRECTION
: NT_ins_col.cxx
- AWAR_INSDEL_RANGE
: NT_ins_col.cxx
- AWAR_INSDEL_SAI
: NT_ins_col.cxx
- AWAR_INSDEL_SAI_CHARS
: NT_ins_col.cxx
- AWAR_INSDEL_WHAT
: NT_ins_col.cxx
- AWAR_INSERT_MODE
: ed4_defs.hxx
- AWAR_ITARGET_STRING
: probe_design.cxx
- AWAR_KEYMAPPING_ENABLE
: AWT_map_key.cxx
- AWAR_KL_DYNAMIC_ENABLED
: pars_awars.h
- AWAR_KL_DYNAMIC_MAXX
: pars_awars.h
- AWAR_KL_DYNAMIC_MAXY
: pars_awars.h
- AWAR_KL_DYNAMIC_START
: pars_awars.h
- AWAR_KL_FUNCTION_TYPE
: pars_awars.h
- AWAR_KL_INCDEPTH
: pars_awars.h
- AWAR_KL_MAXDEPTH
: pars_awars.h
- AWAR_KL_STATIC_DEPTH1
: pars_awars.h
- AWAR_KL_STATIC_DEPTH2
: pars_awars.h
- AWAR_KL_STATIC_DEPTH3
: pars_awars.h
- AWAR_KL_STATIC_DEPTH4
: pars_awars.h
- AWAR_KL_STATIC_DEPTH5
: pars_awars.h
- AWAR_KL_STATIC_ENABLED
: pars_awars.h
- AWAR_LIST
: ED4_search.cxx
- AWAR_LOCAL_GENE_LOCK
: GEN_local.hxx
- AWAR_LOCAL_GENE_NAME
: GEN_local.hxx
- AWAR_LOCAL_ORGANISM_LOCK
: GEN_local.hxx
- AWAR_LOCAL_ORGANISM_NAME
: GEN_local.hxx
- AWAR_MACRO_BASE
: macros_local.hxx
- AWAR_MACRO_INTERRUPT_PROMPT
: macro_gui.cxx
- AWAR_MACRO_RECORDING_EXPAND
: macro_gui.cxx
- AWAR_MACRO_RECORDING_MACRO_TEXT
: macro_gui.cxx
- AWAR_MACRO_RECORDING_RUNB4
: macro_gui.cxx
- AWAR_MARK_TARGET
: NT_group_search.cxx
- AWAR_MARKBYREF
: refentries.cxx
- AWAR_MARKBYREF_ALL
: refentries.cxx
- AWAR_MARKBYREF_CONTENT
: refentries.cxx
- AWAR_MARKBYREF_FIELD
: refentries.cxx
- AWAR_MARKBYREF_FILTER
: refentries.cxx
- AWAR_MARKBYREF_IGNORE_MISSING
: refentries.cxx
- AWAR_MARKBYREF_IGNORE_UNKNOWN
: refentries.cxx
- AWAR_MARKBYREF_RESULT
: refentries.cxx
- AWAR_MARKBYREF_SELECTED
: refentries.cxx
- AWAR_MARKBYREF_TEMP
: refentries.cxx
- AWAR_MARKED_SPECIES_COUNTER
: NT_extern.cxx
- AWAR_MATCH_MODE
: NT_group_search.cxx
- AWAR_MATRIX
: DI_view_matrix.cxx
- AWAR_MATRIX_DIGITS
: DI_view_matrix.cxx
- AWAR_MATRIX_NAMECHARS_LEFT
: DI_view_matrix.cxx
- AWAR_MATRIX_NAMECHARS_TOP
: DI_view_matrix.cxx
- AWAR_MATRIX_PADDINGX
: DI_view_matrix.cxx
- AWAR_MATRIX_PADDINGY
: DI_view_matrix.cxx
- AWAR_MATRIX_SHOWZERO
: DI_view_matrix.cxx
- AWAR_MAX_FREQ_IGNORE_GAPS
: AP_consensus.cxx
- AWAR_MAX_FREQ_PREFIX
: AP_consensus.cxx
- AWAR_MAX_FREQ_SAI_NAME
: AP_consensus.cxx
- AWAR_MAX_MISMATCHES
: aw_awar_defs.hxx
- AWAR_MAYBE_INVALID_GROUP
: NT_group_search.cxx
- AWAR_MERGE_GENE_SPECIES_ACI
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_CREATE_FIELDS
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_CURRENT_FIELD
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_DEST
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_EXAMPLE
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_FIELDS_DEFS
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_FIELDS_SAVE
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_METHOD
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_SAV
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_SOURCE
: MG_gene_species.cxx
- AWAR_MERGE_GENE_SPECIES_TMP
: MG_gene_species.cxx
- AWAR_MERGE_SAV
: merge.hxx
- AWAR_MERGE_TMP
: merge.hxx
- AWAR_MERGE_TMP_DST
: merge.hxx
- AWAR_MERGE_TMP_SRC
: merge.hxx
- AWAR_MFURC
: ad_trees.cxx
- AWAR_MFURC_BOOTSTRAP_LIMIT
: ad_trees.cxx
- AWAR_MFURC_CONSIDER_BOOTSTRAP
: ad_trees.cxx
- AWAR_MFURC_CONSIDER_LENGTH
: ad_trees.cxx
- AWAR_MFURC_CONSIDER_TERMINALS
: ad_trees.cxx
- AWAR_MFURC_LENGTH_LIMIT
: ad_trees.cxx
- AWAR_MOD_SAI_SCRIPT
: ED4_block.cxx
- AWAR_NAME
: ED4_search.cxx
- AWAR_NAMESERVER_ADDID
: AW_rename.hxx
- AWAR_NAMESERVER_STATUS
: AW_names_admin.cxx
- AWAR_NDS_PAGE
: nds.cxx
- AWAR_NDS_USE_ALL
: nds.cxx
- AWAR_NN_BASE
: awtc_next_neighbours.hxx
- AWAR_NN_BASE_LISTED
: ui_species.cxx
- AWAR_NN_BASE_SELECTED
: ui_species.cxx
- AWAR_NN_COMPLEMENT
: ui_species.cxx
- AWAR_NN_FAST_MODE
: awtc_next_neighbours.hxx
- AWAR_NN_LISTED_DEST_FIELD
: ui_species.cxx
- AWAR_NN_LISTED_SCORED_ENTRIES
: ui_species.cxx
- AWAR_NN_MAX_HITS
: ui_species.cxx
- AWAR_NN_MIN_SCORE
: ui_species.cxx
- AWAR_NN_MISMATCHES
: awtc_next_neighbours.hxx
- AWAR_NN_OLIGO_LEN
: awtc_next_neighbours.hxx
- AWAR_NN_RANGE_END
: ui_species.cxx
- AWAR_NN_RANGE_START
: ui_species.cxx
- AWAR_NN_REL_MATCHES
: awtc_next_neighbours.hxx
- AWAR_NN_REL_SCALING
: awtc_next_neighbours.hxx
- AWAR_NN_SELECTED_AUTO_MARK
: ui_species.cxx
- AWAR_NN_SELECTED_AUTO_SEARCH
: ui_species.cxx
- AWAR_NN_SELECTED_HIT_COUNT
: ui_species.cxx
- AWAR_NODIFF_INDICATOR
: ED4_seq_colors.cxx
- AWAR_NTREE_MAIN_WINDOW_COUNT
: NT_local.h
- AWAR_NTREE_TITLE_MODE
: NT_extern.cxx
- AWAR_OPTI_MARKED_ONLY
: pars_awars.h
- AWAR_OPTI_SKIP_FOLDED
: pars_awars.h
- AWAR_ORGANISM_NAME
: aw_awar_defs.hxx
- AWAR_OVERRIDE
: MG_names.cxx
- AWAR_PARS_TYPE
: ap_main.hxx
- AWAR_PARSIMONY
: ap_main.hxx
- AWAR_PC_AUTO_MATCH
: probe_design.cxx
- AWAR_PC_CURRENT_COLLECTION
: probe_design.cxx
- AWAR_PC_MATCH_BIAS
: probe_design.cxx
- AWAR_PC_MATCH_NHITS
: probe_design.cxx
- AWAR_PC_MATCH_WEIGHTS
: probe_design.cxx
- AWAR_PC_MATCH_WIDTH
: probe_design.cxx
- AWAR_PC_MISMATCH_THRESHOLD
: probe_design.cxx
- AWAR_PC_SELECTED_PROBE
: probe_design.cxx
- AWAR_PC_TARGET_NAME
: probe_design.cxx
- AWAR_PC_TARGET_STRING
: probe_design.cxx
- AWAR_PD_COMMON_EXP_BONDS_FORMAT
: probe_design.cxx
- AWAR_PD_COMMON_EXP_SPLIT
: probe_design.cxx
- AWAR_PD_DESIGN_CLIPRESULT
: probe_design.cxx
- AWAR_PD_DESIGN_EXP_DT
: probe_design.cxx
- AWAR_PD_DESIGN_EXP_DTEDGE
: probe_design.cxx
- AWAR_PD_DESIGN_GENE
: probe_design.cxx
- AWAR_PD_DESIGN_MAX_ECOLIPOS
: probe_design.cxx
- AWAR_PD_DESIGN_MAX_GC
: probe_design.cxx
- AWAR_PD_DESIGN_MAX_LENGTH
: probe_design.cxx
- AWAR_PD_DESIGN_MAX_TEMP
: probe_design.cxx
- AWAR_PD_DESIGN_MAXBOND
: probe_design.cxx
- AWAR_PD_DESIGN_MIN_ECOLIPOS
: probe_design.cxx
- AWAR_PD_DESIGN_MIN_GC
: probe_design.cxx
- AWAR_PD_DESIGN_MIN_LENGTH
: probe_design.cxx
- AWAR_PD_DESIGN_MIN_TEMP
: probe_design.cxx
- AWAR_PD_DESIGN_MINTARGETS
: probe_design.cxx
- AWAR_PD_DESIGN_MISHIT
: probe_design.cxx
- AWAR_PD_MATCH_ALSO_REVCOMP
: probe_design.cxx
- AWAR_PD_MATCH_AUTOMATCH
: probe_design.cxx
- AWAR_PD_MATCH_LIM_NMATCH
: probe_design.cxx
- AWAR_PD_MATCH_MARKHITS
: probe_design.cxx
- AWAR_PD_MATCH_MAX_RES
: probe_design.cxx
- AWAR_PD_MATCH_NHITS
: probe_design.cxx
- AWAR_PD_MATCH_NMATCHES
: probe_design.cxx
- AWAR_PD_MATCH_RESOLVE
: probe_design.cxx
- AWAR_PD_MATCH_SORTBY
: probe_design.cxx
- AWAR_PD_MATCH_WRITE2TMP
: probe_design.cxx
- AWAR_PD_SELECTED_MATCH
: probe_design.cxx
- AWAR_PHYLO_ALIGNMENT
: phylo.hxx
- AWAR_PHYLO_FILTER_AMBIG
: phylo.hxx
- AWAR_PHYLO_FILTER_AUTOCALC
: phylo.hxx
- AWAR_PHYLO_FILTER_DOT
: phylo.hxx
- AWAR_PHYLO_FILTER_FILTER
: phylo.hxx
- AWAR_PHYLO_FILTER_LOWER
: phylo.hxx
- AWAR_PHYLO_FILTER_MAXHOM
: phylo.hxx
- AWAR_PHYLO_FILTER_MINHOM
: phylo.hxx
- AWAR_PHYLO_FILTER_MINUS
: phylo.hxx
- AWAR_PHYLO_FILTER_STARTCOL
: phylo.hxx
- AWAR_PHYLO_FILTER_STOPCOL
: phylo.hxx
- AWAR_PHYLO_MARKERLINENAME
: phylo.hxx
- AWAR_PLUGIN_OVERLAY_GROUPS
: item_shader.cxx
- AWAR_PLUGIN_OVERLAY_MARKED
: item_shader.cxx
- AWAR_PLUGIN_PHASE_ALTER
: item_shader.cxx
- AWAR_PLUGIN_PHASE_FREQ
: item_shader.cxx
- AWAR_PLUGIN_PHASE_POSTSHIFT
: item_shader.cxx
- AWAR_PLUGIN_PHASE_PRESHIFT
: item_shader.cxx
- AWAR_PLUGIN_RANGE
: item_shader.cxx
- AWAR_PREFIX_GDE
: GDE_awars.h
- AWAR_PREFIX_GDE_TEMP
: GDE_awars.h
- AWAR_PRIMER_DESIGN_ALLOWED_MATCH_MIN_DIST
: primer_design.hxx
- AWAR_PRIMER_DESIGN_APROX_MEM
: primer_design.hxx
- AWAR_PRIMER_DESIGN_DIST_MAX
: primer_design.hxx
- AWAR_PRIMER_DESIGN_DIST_MIN
: primer_design.hxx
- AWAR_PRIMER_DESIGN_EXPAND_IUPAC
: primer_design.hxx
- AWAR_PRIMER_DESIGN_GC_FACTOR
: primer_design.hxx
- AWAR_PRIMER_DESIGN_GCRATIO_MAX
: primer_design.hxx
- AWAR_PRIMER_DESIGN_GCRATIO_MIN
: primer_design.hxx
- AWAR_PRIMER_DESIGN_LEFT_LENGTH
: primer_design.hxx
- AWAR_PRIMER_DESIGN_LEFT_POS
: primer_design.hxx
- AWAR_PRIMER_DESIGN_LENGTH_MAX
: primer_design.hxx
- AWAR_PRIMER_DESIGN_LENGTH_MIN
: primer_design.hxx
- AWAR_PRIMER_DESIGN_MAX_PAIRS
: primer_design.hxx
- AWAR_PRIMER_DESIGN_RIGHT_LENGTH
: primer_design.hxx
- AWAR_PRIMER_DESIGN_RIGHT_POS
: primer_design.hxx
- AWAR_PRIMER_DESIGN_TEMP_FACTOR
: primer_design.hxx
- AWAR_PRIMER_DESIGN_TEMPERATURE_MAX
: primer_design.hxx
- AWAR_PRIMER_DESIGN_TEMPERATURE_MIN
: primer_design.hxx
- AWAR_PRIMER_TARGET_STRING
: aw_awar_defs.hxx
- AWAR_PROBE_ADMIN_PT_SERVER
: probe_gui.hxx
- AWAR_PROBE_CREATE_GENE_SERVER
: probe_design.cxx
- AWAR_PROMPT_BUTTON
: AWT_prompt.cxx
- AWAR_PROMPT_ERROR
: AWT_prompt.cxx
- AWAR_PROMPT_INPUT
: AWT_prompt.cxx
- AWAR_PROMPT_TEXT
: AWT_prompt.cxx
- AWAR_PROTEIN_NAME
: EXP.hxx
- AWAR_PROTEIN_TYPE
: AP_pro_a_nucs.hxx
- AWAR_PROTEOM_NAME
: EXP.hxx
- AWAR_PROTVIEW
: ed4_ProteinViewer.hxx
- AWAR_PROTVIEW_COMPLEMENTARY_STRAND_1
: ed4_ProteinViewer.hxx
- AWAR_PROTVIEW_COMPLEMENTARY_STRAND_2
: ed4_ProteinViewer.hxx
- AWAR_PROTVIEW_COMPLEMENTARY_STRAND_3
: ed4_ProteinViewer.hxx
- AWAR_PROTVIEW_DEFINED_FIELDS
: ed4_ProteinViewer.hxx
- AWAR_PROTVIEW_DISPLAY_OPTIONS
: ed4_ProteinViewer.hxx
- AWAR_PROTVIEW_FORWARD_STRAND_1
: ed4_ProteinViewer.hxx
- AWAR_PROTVIEW_FORWARD_STRAND_2
: ed4_ProteinViewer.hxx
- AWAR_PROTVIEW_FORWARD_STRAND_3
: ed4_ProteinViewer.hxx
- AWAR_PT_SERVER
: aw_awar_defs.hxx
- AWAR_PV_CURSOR
: ed4_ProteinViewer.hxx
- AWAR_PV_CURSOR_CS_1
: ed4_ProteinViewer.hxx
- AWAR_PV_CURSOR_CS_2
: ed4_ProteinViewer.hxx
- AWAR_PV_CURSOR_CS_3
: ed4_ProteinViewer.hxx
- AWAR_PV_CURSOR_DB
: ed4_ProteinViewer.hxx
- AWAR_PV_CURSOR_FS_1
: ed4_ProteinViewer.hxx
- AWAR_PV_CURSOR_FS_2
: ed4_ProteinViewer.hxx
- AWAR_PV_CURSOR_FS_3
: ed4_ProteinViewer.hxx
- AWAR_PV_DISPLAY_ALL
: ed4_ProteinViewer.hxx
- AWAR_PV_MARKED
: ed4_ProteinViewer.hxx
- AWAR_PV_MARKED_CS_1
: ed4_ProteinViewer.hxx
- AWAR_PV_MARKED_CS_2
: ed4_ProteinViewer.hxx
- AWAR_PV_MARKED_CS_3
: ed4_ProteinViewer.hxx
- AWAR_PV_MARKED_DB
: ed4_ProteinViewer.hxx
- AWAR_PV_MARKED_FS_1
: ed4_ProteinViewer.hxx
- AWAR_PV_MARKED_FS_2
: ed4_ProteinViewer.hxx
- AWAR_PV_MARKED_FS_3
: ed4_ProteinViewer.hxx
- AWAR_PV_SELECTED
: ed4_ProteinViewer.hxx
- AWAR_PV_SELECTED_CS_1
: ed4_ProteinViewer.hxx
- AWAR_PV_SELECTED_CS_2
: ed4_ProteinViewer.hxx
- AWAR_PV_SELECTED_CS_3
: ed4_ProteinViewer.hxx
- AWAR_PV_SELECTED_DB
: ed4_ProteinViewer.hxx
- AWAR_PV_SELECTED_FS_1
: ed4_ProteinViewer.hxx
- AWAR_PV_SELECTED_FS_2
: ed4_ProteinViewer.hxx
- AWAR_PV_SELECTED_FS_3
: ed4_ProteinViewer.hxx
- AWAR_PVP_SAI
: AP_pos_var_pars.cxx
- AWAR_PVP_TREE
: AP_pos_var_pars.cxx
- AWAR_QUESTION
: AW_question.cxx
- AWAR_RAND_PERCENT
: pars_awars.h
- AWAR_RAND_REPEAT
: pars_awars.h
- AWAR_RANGE
: aw_awar_defs.hxx
- AWAR_RANGE_OVERLAY
: AW_preset.cxx
- AWAR_REALIGN_CUTOFF
: ad_transpro.cxx
- AWAR_REALIGN_INCALI
: ad_transpro.cxx
- AWAR_REALIGN_UNMARK
: ad_transpro.cxx
- AWAR_REMAP_ALIGNMENT
: MG_preserves.cxx
- AWAR_REMAP_CANDIDATE
: MG_preserves.cxx
- AWAR_REMAP_ENABLE
: merge.hxx
- AWAR_REMAP_SEL_REFERENCE
: MG_preserves.cxx
- AWAR_REMAP_SPECIES_LIST
: merge.hxx
- AWAR_RENAME_EXPRESSION
: NT_group_search.cxx
- AWAR_RENAME_STATUS
: MG_names.cxx
- AWAR_REPORT_FIELD
: MG_checkfield.cxx
- AWAR_RESULT_ORDER
: NT_group_search.cxx
- AWAR_RESULTING_GROUP_NAME
: NT_group_search.cxx
- AWAR_SAI_ALL_SPECIES
: ED4_visualizeSAI.cxx
- AWAR_SAI_AUTO_SELECT
: ED4_visualizeSAI.cxx
- AWAR_SAI_CLR
: ED4_visualizeSAI.cxx
- AWAR_SAI_CLR_COUNT
: ED4_visualizeSAI.cxx
- AWAR_SAI_CLR_DEF
: ED4_visualizeSAI.cxx
- AWAR_SAI_CLR_TAB
: ED4_visualizeSAI.cxx
- AWAR_SAI_CLR_TRANS_TAB_NAMES
: ED4_visualizeSAI.cxx
- AWAR_SAI_CLR_TRANS_TAB_REL
: ED4_visualizeSAI.cxx
- AWAR_SAI_CLR_TRANS_TABLE
: ED4_visualizeSAI.cxx
- AWAR_SAI_COLOR_STR
: aw_awar_defs.hxx
- AWAR_SAI_ENABLE
: ED4_visualizeSAI.cxx
- AWAR_SAI_GLOBAL
: aw_awar_defs.hxx
- AWAR_SAI_GROUP
: ad_ext.cxx
- AWAR_SAI_NAME
: aw_awar_defs.hxx
- AWAR_SAI_REFRESH_GROUPS
: ad_ext.cxx
- AWAR_SAI_VISUALIZED
: ED4_visualizeSAI.cxx
- AWAR_SAVED_DB_PATH
: aw_global_awars.hxx
- AWAR_SC_ACI
: saicalc.cxx
- AWAR_SC_ACI_BASE
: saicalc.cxx
- AWAR_SC_ACI_CONFIG
: saicalc.cxx
- AWAR_SC_ACI_TEMP
: saicalc.cxx
- AWAR_SC_BASE
: saicalc.cxx
- AWAR_SC_BOOL_BASE
: saicalc.cxx
- AWAR_SC_BOOL_CONFIG
: saicalc.cxx
- AWAR_SC_BOOL_IN0
: saicalc.cxx
- AWAR_SC_BOOL_IN1
: saicalc.cxx
- AWAR_SC_BOOL_OP
: saicalc.cxx
- AWAR_SC_BOOL_OUT0
: saicalc.cxx
- AWAR_SC_BOOL_OUT1
: saicalc.cxx
- AWAR_SC_BOOL_RULES
: saicalc.cxx
- AWAR_SC_BOOL_SEL_RULE
: saicalc.cxx
- AWAR_SC_BOOL_TEMP
: saicalc.cxx
- AWAR_SC_MATRIX_BASE
: saicalc.cxx
- AWAR_SC_MATRIX_CELL_TEMPL
: saicalc.cxx
- AWAR_SC_MATRIX_CONFIG
: saicalc.cxx
- AWAR_SC_MATRIX_TEMP
: saicalc.cxx
- AWAR_SC_METHOD
: saicalc.cxx
- AWAR_SC_METHOD_CONFIG
: saicalc.cxx
- AWAR_SC_SCOPE
: saicalc.cxx
- AWAR_SC_SOURCE_SAI_LIST
: saicalc.cxx
- AWAR_SC_TARGET_SAI
: saicalc.cxx
- AWAR_SC_TEMP
: saicalc.cxx
- AWAR_SC_TRANSLATE_BASE
: saicalc.cxx
- AWAR_SC_TRANSLATE_CONFIG
: saicalc.cxx
- AWAR_SC_TRANSLATE_DEFAULT
: saicalc.cxx
- AWAR_SC_TRANSLATE_IO_TEMPL
: saicalc.cxx
- AWAR_SC_TRANSLATE_TEMP
: saicalc.cxx
- AWAR_SEARCH_MODE
: NT_group_search.cxx
- AWAR_SEARCH_WHICH_TREES
: NT_group_search.cxx
- AWAR_SECEDIT_BASELINEWIDTH
: SEC_db.hxx
- AWAR_SECEDIT_BOND_SYMBOLS_EDIT4
: SEC_db.hxx
- AWAR_SECEDIT_BOND_SYMBOLS_TRANS
: SEC_db.hxx
- AWAR_SECEDIT_BOND_THICKNESS
: SEC_db.hxx
- AWAR_SECEDIT_DISPLAY_SAI
: SEC_db.hxx
- AWAR_SECEDIT_DISPLAY_SEARCH
: SEC_db.hxx
- AWAR_SECEDIT_DISPPOS_BINDING
: SEC_db.hxx
- AWAR_SECEDIT_DISPPOS_ECOLI
: SEC_db.hxx
- AWAR_SECEDIT_DIST_BETW_STRANDS
: SEC_db.hxx
- AWAR_SECEDIT_HIDE_BASES
: SEC_db.hxx
- AWAR_SECEDIT_SAVEDIR
: SEC_db.hxx
- AWAR_SECEDIT_SHOW_BONDS
: SEC_db.hxx
- AWAR_SECEDIT_SHOW_CURPOS
: SEC_db.hxx
- AWAR_SECEDIT_SHOW_DEBUG
: SEC_db.hxx
- AWAR_SECEDIT_SHOW_ECOLI_POS
: SEC_db.hxx
- AWAR_SECEDIT_SHOW_HELIX_NRS
: SEC_db.hxx
- AWAR_SECEDIT_SHOW_STR_SKELETON
: SEC_db.hxx
- AWAR_SECEDIT_SKELETON_THICKNESS
: SEC_db.hxx
- AWAR_SECURITY_LEVEL
: aw_awar_defs.hxx
- AWAR_SELECT_ACISRT
: nds.h
- AWAR_SELECT_ACISRT_PRE
: nds.h
- AWAR_SELECTED_GROUP_NAME
: NT_group_search.cxx
- AWAR_SELECTED_PLUGIN
: item_shader.cxx
- AWAR_SELECTED_RESULT_GROUP
: NT_group_search.cxx
- AWAR_SELECTED_VALNAME
: NT_validManual.cxx
- AWAR_SELECTOR_COLOR_LABEL
: AW_preset.cxx
- AWAR_SELECTOR_FONT_LABEL
: AW_preset.cxx
- AWAR_SELECTOR_FONT_NAME
: AW_preset.cxx
- AWAR_SELECTOR_FONT_SIZE
: AW_preset.cxx
- AWAR_SEQ_NAME_SELECTOR_AA
: ED4_seq_colors.cxx
- AWAR_SEQ_NAME_SELECTOR_NA
: ED4_seq_colors.cxx
- AWAR_SEQ_NAME_STRINGS_TEMPLATE
: ED4_seq_colors.cxx
- AWAR_SEQ_NAME_TEMPLATE
: ED4_seq_colors.cxx
- AWAR_SEQ_PATH
: ED4_seq_colors.cxx
- AWAR_SET_CURSOR_POSITION
: aw_awar_defs.hxx
- AWAR_SHOW_DIMENSION
: item_shader.cxx
- AWAR_SPECIES_DST
: MG_species.cxx
- AWAR_SPECIES_JOIN_FIELD
: NT_join.cxx
- AWAR_SPECIES_JOIN_SEP
: NT_join.cxx
- AWAR_SPECIES_JOIN_SEP2
: NT_join.cxx
- AWAR_SPECIES_NAME
: aw_awar_defs.hxx
- AWAR_SPECIES_NAME_LOCAL
: aw_awar_defs.hxx
- AWAR_SPECIES_SRC
: MG_species.cxx
- AWAR_SPECIES_XFER_FTS
: MG_species.cxx
- AWAR_SPECIES_XFER_SCOPE
: MG_species.cxx
- AWAR_SPECIES_XFER_TYPE
: MG_species.cxx
- AWAR_SPLIT_ALI_BASE
: NT_split_ali.cxx
- AWAR_SPLIT_ALI_BTMP
: NT_split_ali.cxx
- AWAR_SPLIT_ALI_MARKED
: NT_split_ali.cxx
- AWAR_SPLIT_ALI_OVERWRITE
: NT_split_ali.cxx
- AWAR_SPLIT_ALI_POSITIONS
: NT_split_ali.cxx
- AWAR_SPLIT_ALI_TARGET
: NT_split_ali.cxx
- AWAR_SPV_ACI_COMMAND
: SaiProbeVisualization.hxx
- AWAR_SPV_DB_FIELD_NAME
: SaiProbeVisualization.hxx
- AWAR_SPV_DB_FIELD_WIDTH
: SaiProbeVisualization.hxx
- AWAR_SPV_DISP_SAI
: SaiProbeVisualization.hxx
- AWAR_SPV_SAI_2_PROBE
: SaiProbeVisualization.hxx
- AWAR_SPV_SAI_COLOR
: SaiProbeVisualization.hxx
- AWAR_SPV_SELECTED_PROBE
: SaiProbeVisualization.hxx
- AWAR_SQ_FILTER_NAME
: SQ_main.cxx
- AWAR_SQ_MARK_BELOW
: SQ_main.cxx
- AWAR_SQ_MARK_FLAG
: SQ_main.cxx
- AWAR_SQ_MARK_ONLY_FLAG
: SQ_main.cxx
- AWAR_SQ_PERM
: SQ_main.cxx
- AWAR_SQ_REEVALUATE
: SQ_main.cxx
- AWAR_SQ_TEMP
: SQ_main.cxx
- AWAR_SQ_WEIGHT_BASES
: SQ_main.cxx
- AWAR_SQ_WEIGHT_CONSENSUS
: SQ_main.cxx
- AWAR_SQ_WEIGHT_DEVIATION
: SQ_main.cxx
- AWAR_SQ_WEIGHT_GC
: SQ_main.cxx
- AWAR_SQ_WEIGHT_HELIX
: SQ_main.cxx
- AWAR_SQ_WEIGHT_IUPAC
: SQ_main.cxx
- AWAR_STACKPOINTER
: ap_main.hxx
- AWAR_STATUS
: AW_status.cxx
- AWAR_STATUS_ELAPSED
: AW_status.cxx
- AWAR_STATUS_GAUGE
: AW_status.cxx
- AWAR_STATUS_TEXT
: AW_status.cxx
- AWAR_STATUS_TITLE
: AW_status.cxx
- AWAR_SUBMIT_FILE
: AWTC_submission.cxx
- AWAR_SUBMIT_PARSED
: AWTC_submission.cxx
- AWAR_SUBMIT_PARSER
: AWTC_submission.cxx
- AWAR_SUBMIT_PRIVAT
: AWTC_submission.cxx
- AWAR_SUBMIT_SOURCE
: AWTC_submission.cxx
- AWAR_TAG_DEL
: MG_species.cxx
- AWAR_TAG_DST
: MG_species.cxx
- AWAR_TAG_SRC
: MG_species.cxx
- AWAR_TARGET_STRING
: aw_awar_defs.hxx
- AWAR_TEMPL_AUTO_SYNCED
: NT_sync_scroll.cxx
- AWAR_TEMPL_SYNCED_WITH_WINDOW
: NT_sync_scroll.cxx
- AWAR_TESTER_EXPORT_RESULT
: AWTI_edit.cxx
- AWAR_TESTER_IMPORT_FILENAME
: AWTI_edit.cxx
- AWAR_TESTER_IMPORT_SPECIES
: AWTI_edit.cxx
- AWAR_TESTER_IMPORT_STATUS
: AWTI_edit.cxx
- AWAR_TESTER_LINK_EX2IMPORT
: AWTI_edit.cxx
- AWAR_TOPAREA_SAIS
: NT_local.h
- AWAR_TOUPPER
: MG_checkfield.cxx
- AWAR_TRACK_ALI
: NT_trackAliChanges.cxx
- AWAR_TRACK_BASE
: NT_trackAliChanges.cxx
- AWAR_TRACK_INITIALS
: NT_trackAliChanges.cxx
- AWAR_TRANSPRO_DEST
: ad_transpro.cxx
- AWAR_TRANSPRO_MODE
: ad_transpro.cxx
- AWAR_TRANSPRO_POS
: ad_transpro.cxx
- AWAR_TRANSPRO_PREFIX
: ad_transpro.cxx
- AWAR_TRANSPRO_SOURCE
: ad_transpro.cxx
- AWAR_TRANSPRO_WRITE
: ad_transpro.cxx
- AWAR_TRANSPRO_XSTART
: ad_transpro.cxx
- AWAR_TREE
: aw_awar_defs.hxx
- AWAR_TREE_COMPARE_ACTION
: NT_taxonomy.cxx
- AWAR_TREE_COMPARE_MIN_TAX_LEVELS
: NT_taxonomy.cxx
- AWAR_TREE_COMPARE_WRITE_FIELD
: NT_taxonomy.cxx
- AWAR_TREE_CONSENSE_SAV
: ad_trees.cxx
- AWAR_TREE_CONSENSE_SELECTED
: ad_trees.cxx
- AWAR_TREE_CONSENSE_TMP
: ad_trees.cxx
- AWAR_TREE_CONSENSE_TREE
: ad_trees.cxx
- AWAR_TREE_DEST
: TreeAdmin.cxx
- AWAR_TREE_EXPORT_FILEBASE
: ad_trees.cxx
- AWAR_TREE_EXPORT_FILTER
: ad_trees.cxx
- AWAR_TREE_EXPORT_FORMAT
: ad_trees.cxx
- AWAR_TREE_EXPORT_HIDE_FOLDED_GROUPS
: ad_trees.cxx
- AWAR_TREE_EXPORT_INCLUDE_BOOTSTRAPS
: ad_trees.cxx
- AWAR_TREE_EXPORT_INCLUDE_BRANCHLENS
: ad_trees.cxx
- AWAR_TREE_EXPORT_INCLUDE_GROUPNAMES
: ad_trees.cxx
- AWAR_TREE_EXPORT_NAME
: ad_trees.cxx
- AWAR_TREE_EXPORT_NDS
: ad_trees.cxx
- AWAR_TREE_EXPORT_NON_ASCII
: ad_trees.cxx
- AWAR_TREE_EXPORT_QUOTEMODE
: ad_trees.cxx
- AWAR_TREE_EXPORT_REPLACE
: ad_trees.cxx
- AWAR_TREE_EXPORT_SAV
: ad_trees.cxx
- AWAR_TREE_IMPORT
: ad_trees.cxx
- AWAR_TREE_NAME
: ad_trees.h
- AWAR_TREE_NAME_DST
: MG_trees.cxx
- AWAR_TREE_NAME_SRC
: MG_trees.cxx
- AWAR_TREE_OVERWRITE
: MG_trees.cxx
- AWAR_TREE_RECOMPUTE
: aw_awar_defs.hxx
- AWAR_TREE_REFRESH
: aw_awar_defs.hxx
- AWAR_TREE_REM
: ad_trees.cxx
- AWAR_TREE_REV1
: NT_sort.cxx
- AWAR_TREE_REV2
: NT_sort.cxx
- AWAR_TREE_REV3
: NT_sort.cxx
- AWAR_TREE_SAV
: ad_trees.cxx
- AWAR_TREE_SECURITY
: ad_trees.cxx
- AWAR_TREE_SELECTED
: NT_group_search.cxx
- AWAR_TREE_SORT1
: NT_sort.cxx
- AWAR_TREE_SORT2
: NT_sort.cxx
- AWAR_TREE_SORT3
: NT_sort.cxx
- AWAR_TREE_SOURCE
: TreeAdmin.cxx
- AWAR_TREE_SYNCROOT_SELECTED
: NT_syncroot.cxx
- AWAR_TREE_TMP
: ad_trees.cxx
- AWAR_TREE_XFER_WHAT
: MG_trees.cxx
- AWAR_VALUE_MAX
: field_shader.cxx
- AWAR_VALUE_MIN
: field_shader.cxx
- AWAR_WWW_BROWSER
: aw_global_awars.hxx
- AWAR_WWW_DESC_TEMPLATE
: AWT_www.cxx
- AWAR_WWW_SELECT
: AWT_www.cxx
- AWAR_WWW_SELECT_TEMPLATE
: AWT_www.cxx
- AWAR_WWW_TEMPLATE
: AWT_www.cxx
- AWAR_XFERRULE_ACI
: xfergui.cxx
- AWAR_XFERRULE_AVAIL_CATEGORY
: xfergui.cxx
- AWAR_XFERRULE_AVAIL_SELECTED
: xfergui.cxx
- AWAR_XFERRULE_FIELD
: xfergui.cxx
- AWAR_XFERRULE_INPUT_FIELDS
: xfergui.cxx
- AWAR_XFERRULE_INPUT_SELECTED
: xfergui.cxx
- AWAR_XFERRULE_LOSS
: xfergui.cxx
- AWAR_XFERRULE_SELECTED
: xfergui.cxx
- AWAR_XFERRULE_SEP
: xfergui.cxx
- AWAR_XFERRULE_TARGETFIELD
: xfergui.cxx
- AWAR_XFERRULE_TYPE
: xfergui.cxx
- AWAR_XFERSET_COMMENT
: xfergui.cxx
- AWAR_XFERSET_FTSBASE
: xfergui.cxx
- AWAR_XFERSET_FTSDIR
: xfergui.cxx
- AWAR_XFERSET_FTSFILTER
: xfergui.cxx
- AWAR_XFERSET_FTSNAME
: xfergui.cxx
- AWAR_XFERSET_SELECTED
: xfergui.cxx
- AWAR_XFERSET_UNDEFINED
: xfergui.cxx
- AWARBASE_XFERRULE_TMP
: xfergui.cxx
- AWARBASE_XFERSET_TMP
: xfergui.cxx
- AWARFORMAT_CRIT_EQUALS
: NT_group_search.cxx
- AWARFORMAT_CRIT_KEY
: NT_group_search.cxx
- AWARFORMAT_CRIT_MATCHES
: NT_group_search.cxx
- AWARFORMAT_CRIT_OPERATOR
: NT_group_search.cxx
- awt_assert
: iupac.cxx
, awt_canvas.hxx
, AWT_TreeAwars.cxx
, AWT_canio.cxx
, awt_config_manager.hxx
, awt.hxx
, AWT_modules.cxx
- AWT_CATCH
: aw_device_click.hxx
- AWT_CODON_TABLE_MAX_NAME_LENGTH
: AP_codon_table.cxx
- AWT_CODON_TABLES
: AP_codon_table.hxx
- AWT_MAX_CODONS
: AP_codon_table.hxx
- AWT_MIN_WIDTH
: awt_canvas.hxx
- AWT_NO_CATCH
: aw_device_click.hxx
- AWT_SCOPE_GLOBAL
: AWT_input_mask.cxx
- AWT_SCOPE_LOCAL
: AWT_input_mask.cxx
- AWT_TREE
: TreeDisplay.hxx
- AWT_TREE_PARS
: PARS_main.cxx
- AWT_ZOOM_OUT_STEP
: awt_canvas.hxx
- awtc_assert
: AWTC_submission.cxx
- awti_assert
: awti_imp_local.hxx
, awti_exp_local.hxx
- AWTI_IMPORT_CHECK_BUFFER_SIZE
: awti_imp_local.hxx