AP_filter.hxx File Reference

#include <arbdb_base.h>
#include <arb_assert.h>
#include <arbtools.h>

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Classes
class	AP_filter
class	AP_weights

Macros
#define	af_assert(cond)   arb_assert(cond)

Typedefs
typedef unsigned char	uchar

Enumerations
enum	AWT_FILTER_SIMPLIFY { AWT_FILTER_SIMPLIFY_NOT_INITIALIZED = -1, AWT_FILTER_SIMPLIFY_NONE = 0, AWT_FILTER_SIMPLIFY_DNA, AWT_FILTER_SIMPLIFY_PROTEIN }
enum	AF_Not { NOT }
enum	AF_Combine { AND, OR, XOR }

Functions
long	AP_timer ()

Macro Definition Documentation

#define af_assert

(

cond

)

arb_assert(cond)

Definition at line 24 of file AP_filter.hxx.

Referenced by AP_filter::AP_filter(), AP_weights::AP_weights(), AP_filter::blowup_string(), AP_filter::bootstrapped_seqpos(), AP_filter::enable_bootstrap(), AP_filter::enable_simplify(), AP_filter::filter_string(), AP_filter::is_invalid(), AP_filter::to_string(), AP_filter::use_position(), and AP_weights::weight().

Typedef Documentation

typedef unsigned char uchar

Definition at line 26 of file AP_filter.hxx.

Enumeration Type Documentation

enum AWT_FILTER_SIMPLIFY

Enumerator
AWT_FILTER_SIMPLIFY_NOT_INITIALIZED
AWT_FILTER_SIMPLIFY_NONE
AWT_FILTER_SIMPLIFY_DNA
AWT_FILTER_SIMPLIFY_PROTEIN

Definition at line 28 of file AP_filter.hxx.

enum AF_Not

Enumerator
NOT

Definition at line 35 of file AP_filter.hxx.

enum AF_Combine

Enumerator
AND
OR
XOR

Definition at line 36 of file AP_filter.hxx.

Function Documentation

long AP_timer

(

)

Definition at line 299 of file AP_filter.cxx.