#include <aw_base.hxx>
Go to the source code of this file.
Macros | |
| #define | AWAR_PRIMER_DESIGN_LEFT_POS "primer_design/position/left_pos" |
| #define | AWAR_PRIMER_DESIGN_LEFT_LENGTH "primer_design/position/left_length" |
| #define | AWAR_PRIMER_DESIGN_RIGHT_POS "primer_design/position/right_pos" |
| #define | AWAR_PRIMER_DESIGN_RIGHT_LENGTH "primer_design/position/right_length" |
| #define | AWAR_PRIMER_DESIGN_LENGTH_MIN "primer_design/length/min" |
| #define | AWAR_PRIMER_DESIGN_LENGTH_MAX "primer_design/length/max" |
| #define | AWAR_PRIMER_DESIGN_DIST_MIN "primer_design/distance/min" |
| #define | AWAR_PRIMER_DESIGN_DIST_MAX "primer_design/distance/max" |
| #define | AWAR_PRIMER_DESIGN_GCRATIO_MIN "primer_design/gcratio/min" |
| #define | AWAR_PRIMER_DESIGN_GCRATIO_MAX "primer_design/gcratio/max" |
| #define | AWAR_PRIMER_DESIGN_TEMPERATURE_MIN "primer_design/temperature/min" |
| #define | AWAR_PRIMER_DESIGN_TEMPERATURE_MAX "primer_design/temperature/max" |
| #define | AWAR_PRIMER_DESIGN_ALLOWED_MATCH_MIN_DIST "primer_design/allowed_match_min_dist" |
| #define | AWAR_PRIMER_DESIGN_EXPAND_IUPAC "primer_design/expand_IUPAC" |
| #define | AWAR_PRIMER_DESIGN_MAX_PAIRS "primer_design/max_pairs" |
| #define | AWAR_PRIMER_DESIGN_GC_FACTOR "primer_design/GC_factor" |
| #define | AWAR_PRIMER_DESIGN_TEMP_FACTOR "primer_design/temp_factor" |
| #define | AWAR_PRIMER_DESIGN_APROX_MEM "primer_design/aprox_mem" |
Functions | |
| void | create_primer_design_variables (AW_root *aw_root, AW_default aw_def, AW_default global) |
| AW_window * | create_primer_design_window (AW_root *root, GBDATA *gb_main) |
Macro Definition Documentation
| #define AWAR_PRIMER_DESIGN_LEFT_POS "primer_design/position/left_pos" |
Definition at line 19 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), primer_design_event_go(), and primer_design_event_init().
| #define AWAR_PRIMER_DESIGN_LEFT_LENGTH "primer_design/position/left_length" |
Definition at line 20 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), get_estimated_memory(), primer_design_event_go(), and primer_design_event_init().
| #define AWAR_PRIMER_DESIGN_RIGHT_POS "primer_design/position/right_pos" |
Definition at line 21 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), primer_design_event_go(), and primer_design_event_init().
| #define AWAR_PRIMER_DESIGN_RIGHT_LENGTH "primer_design/position/right_length" |
Definition at line 22 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), get_estimated_memory(), primer_design_event_go(), and primer_design_event_init().
Definition at line 23 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), primer_design_event_check_primer_length(), and primer_design_event_go().
Definition at line 24 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), get_estimated_memory(), primer_design_event_check_primer_length(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_DIST_MIN "primer_design/distance/min" |
Definition at line 25 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), primer_design_event_go(), and primer_design_event_init().
| #define AWAR_PRIMER_DESIGN_DIST_MAX "primer_design/distance/max" |
Definition at line 26 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), primer_design_event_go(), and primer_design_event_init().
| #define AWAR_PRIMER_DESIGN_GCRATIO_MIN "primer_design/gcratio/min" |
Definition at line 27 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_GCRATIO_MAX "primer_design/gcratio/max" |
Definition at line 28 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_TEMPERATURE_MIN "primer_design/temperature/min" |
Definition at line 29 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_TEMPERATURE_MAX "primer_design/temperature/max" |
Definition at line 30 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_ALLOWED_MATCH_MIN_DIST "primer_design/allowed_match_min_dist" |
Definition at line 31 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_EXPAND_IUPAC "primer_design/expand_IUPAC" |
Definition at line 32 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_MAX_PAIRS "primer_design/max_pairs" |
Definition at line 33 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_GC_FACTOR "primer_design/GC_factor" |
Definition at line 34 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), primer_design_event_check_gc_factor(), primer_design_event_check_temp_factor(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_TEMP_FACTOR "primer_design/temp_factor" |
Definition at line 35 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), primer_design_event_check_gc_factor(), primer_design_event_check_temp_factor(), and primer_design_event_go().
| #define AWAR_PRIMER_DESIGN_APROX_MEM "primer_design/aprox_mem" |
Definition at line 36 of file primer_design.hxx.
Referenced by create_primer_design_variables(), create_primer_design_window(), and primer_design_event_update_memory().
Function Documentation
| void create_primer_design_variables | ( | AW_root * | aw_root, |
| AW_default | aw_def, | ||
| AW_default | global | ||
| ) |
Definition at line 94 of file primer_design.cxx.
References AW_awar::add_callback(), AW_root::awar_int(), AWAR_PRIMER_DESIGN_ALLOWED_MATCH_MIN_DIST, AWAR_PRIMER_DESIGN_APROX_MEM, AWAR_PRIMER_DESIGN_DIST_MAX, AWAR_PRIMER_DESIGN_DIST_MIN, AWAR_PRIMER_DESIGN_EXPAND_IUPAC, AWAR_PRIMER_DESIGN_GC_FACTOR, AWAR_PRIMER_DESIGN_GCRATIO_MAX, AWAR_PRIMER_DESIGN_GCRATIO_MIN, AWAR_PRIMER_DESIGN_LEFT_LENGTH, AWAR_PRIMER_DESIGN_LEFT_POS, AWAR_PRIMER_DESIGN_LENGTH_MAX, AWAR_PRIMER_DESIGN_LENGTH_MIN, AWAR_PRIMER_DESIGN_MAX_PAIRS, AWAR_PRIMER_DESIGN_RIGHT_LENGTH, AWAR_PRIMER_DESIGN_RIGHT_POS, AWAR_PRIMER_DESIGN_TEMP_FACTOR, AWAR_PRIMER_DESIGN_TEMPERATURE_MAX, AWAR_PRIMER_DESIGN_TEMPERATURE_MIN, AWAR_PRIMER_TARGET_STRING, AW_root::awar_string(), NULp, primer_design_event_check_primer_length(), and primer_design_event_update_memory().
Referenced by nt_create_all_awars().
Definition at line 462 of file primer_design.cxx.
References aw_message(), AW_POPDOWN(), AW_ROOT_DEFAULT, AW_root::awar(), AWAR_PRIMER_DESIGN_ALLOWED_MATCH_MIN_DIST, AWAR_PRIMER_DESIGN_APROX_MEM, AWAR_PRIMER_DESIGN_DIST_MAX, AWAR_PRIMER_DESIGN_DIST_MIN, AWAR_PRIMER_DESIGN_EXPAND_IUPAC, AWAR_PRIMER_DESIGN_GC_FACTOR, AWAR_PRIMER_DESIGN_GCRATIO_MAX, AWAR_PRIMER_DESIGN_GCRATIO_MIN, AWAR_PRIMER_DESIGN_LEFT_LENGTH, AWAR_PRIMER_DESIGN_LEFT_POS, AWAR_PRIMER_DESIGN_LENGTH_MAX, AWAR_PRIMER_DESIGN_LENGTH_MIN, AWAR_PRIMER_DESIGN_MAX_PAIRS, AWAR_PRIMER_DESIGN_RIGHT_LENGTH, AWAR_PRIMER_DESIGN_RIGHT_POS, AWAR_PRIMER_DESIGN_TEMP_FACTOR, AWAR_PRIMER_DESIGN_TEMPERATURE_MAX, AWAR_PRIMER_DESIGN_TEMPERATURE_MIN, AWAR_SPECIES_NAME, AWT_insert_config_manager(), GBT_find_species(), GEN_is_genome_db(), makeHelpCallback(), NULp, primer_design_event_check_gc_factor(), primer_design_event_check_temp_factor(), primer_design_event_go(), primer_design_event_init(), AW_awar::read_string(), and ta.
Referenced by popup_new_main_window().
