- c -

• C_MULT : MultiProbe.hxx
• ca_assert : global.h , cache.h
• ca_assert_expensive : cache.h
• CA_UNIQUETYPE : static_assert.h
• CACHE_SEQ_PERCENT : PT_prefixtree.cxx
• CACHED_TRANSLATORS : AP_pro_a_nucs.cxx
• CALCULATE_STATS_ON_QUERY : probe.h
• CALL_FN_v_v : valgrind.h
• CALL_FN_v_W : valgrind.h
• CALL_FN_v_WW : valgrind.h
• CALL_FN_v_WWW : valgrind.h
• CALLER_FILE : aisc_def.h
• CALLER_LINE : aisc_def.h
• CAN_SCORE_LEFT : fast_aligner.cxx
• CAN_SCORE_RIGHT : fast_aligner.cxx
• CAS_EDIT4 : consensus.h
• CAS_INTERNAL : consensus.h
• CAS_NTREE : consensus.h
• CAST_DEALLOCATOR : cbtypes.h
• CAST_TO_AW_CL : cbtypes.h
• CASTABLE_TO_AW_CL : cbtypes.h
• CASTSIG : arbtools.h
• CATSCALE : arb_export_rates.cxx
• cb : ED4_search.cxx
• CBTYPE_FFV_BUILDER_TEMPLATES : cbtypes.h
• CBTYPE_FVF_BUILDER_NP1 : cbtypes.h
• CBTYPE_FVF_BUILDER_P1_F1 : cbtypes.h
• CBTYPE_FVF_BUILDER_P1_F1F2 : cbtypes.h
• CBTYPE_FVF_BUILDER_TEMPLATES : cbtypes.h
• CBTYPE_FVV_BUILDER_NP : cbtypes.h
• CBTYPE_FVV_BUILDER_NP12 : cbtypes.h
• CBTYPE_FVV_BUILDER_P : cbtypes.h
• CBTYPE_FVV_BUILDER_P1 : cbtypes.h
• CBTYPE_FVV_BUILDER_P1P2 : cbtypes.h
• CBTYPE_FVV_BUILDER_TEMPLATES : cbtypes.h
• CBTYPE_VV_BUILDER_NP12 : cbtypes.h
• CBTYPE_VV_BUILDER_P1 : cbtypes.h
• CBTYPE_VV_BUILDER_P1P2 : cbtypes.h
• CBTYPE_VV_BUILDER_TEMPLATES : cbtypes.h
• cf_breaker : ed4_protein_2nd_structure.hxx
• cf_former : ed4_protein_2nd_structure.hxx
• CHANGE_KEY_PATH : arbdbt.h
• CHANGE_KEY_PATH_EXPERIMENTS : arbdbt.h
• CHANGE_KEY_PATH_GENES : arbdbt.h
• CHANGE_REASONS : aw_inotify.hxx
• CHANGEKEY : arbdbt.h
• CHANGEKEY_HIDDEN : arbdbt.h
• CHANGEKEY_NAME : arbdbt.h
• CHANGEKEY_TYPE : arbdbt.h
• char2BaseType : base.h
• CHAR_PTR : arb_proto_2_xsub.cxx
• CHARACTEROFFSET : ed4_defs.hxx
• CHARACTERS : RNA3D_Renderer.hxx
• CHEAP_GAP_EXTEND : ClustalV.cxx
• CHEAP_GAP_OPEN : ClustalV.cxx
• cheap_if : ClustalV.cxx
• CHECK_HIER_CB_CONDITION : ad_cb.cxx
• CHECK_ROOT_POPS : AP_buffer.hxx
• CHECK_SEMI_ESCAPED : arb_gene_probe.cxx
• CHECK_STACK_RESOURCE_HANDLING : AP_buffer.hxx
• CHOICE_LIST : GDE_def.h
• CHOICE_MENU : GDE_def.h
• CHOICE_SAI : GDE_def.h
• CHOICE_TREE : GDE_def.h
• CHOICE_WEIGHTS : GDE_def.h
• CHOOSER : GDE_def.h
• cl_assert : di_clustertree.hxx , di_foundclusters.hxx
• CLIENT_ERROR : adcomm.cxx
• CLIENT_RECEIVE_ERROR : adcomm.cxx
• CLIENT_SEND_ERROR : adcomm.cxx
• CLIENT_SEND_ERROR_AT_ITEM : adcomm.cxx
• CLIP_OVERLAP : awt_canvas.hxx
• cmp : adoptimize.cxx , admap.cxx
• COLORLINK : RNA3D_StructureData.cxx
• COLUMN_STAT_ROW_HEIGHT : ed4_defs.hxx
• COLUMN_STAT_ROWS : ed4_defs.hxx
• COMM_ERROR : adcomm.cxx
• COMM_RECEIVE_ERROR : adcomm.cxx
• COMM_SEND_ERROR : adcomm.cxx
• COMMAND_DROPS_INPUT_STREAMS : gb_aci_impl.h
• COMMENT : readcfg.c
• COMPARABLE_BASES : ClustalV.cxx
• COMPILE_ASSERTED_TYPE : static_assert.h
• COMPLEMENTARY_STRAND : ED4_ProteinViewer.cxx
• COMPLEMENTARY_STRANDS : ED4_ProteinViewer.cxx
• COMPRESSIBLE : adoptimize.cxx
• concatenate : stringize.h
• concatenate_pscans : stringize.h
• CONFIG_BASE_PATH : NT_edconf.cxx
• CONFIG_DATA_PATH : ad_config.h
• CONFIG_ITEM : ad_config.h
• CONFIG_SEPARATOR : NT_edconf.cxx
• CONSENSUS_AWAR_SOURCE : chartable.cxx , ED4_consensus.cxx , AP_consensus.cxx
• CONSENSUS_CONFIG_CONSIDBOUND : consensus_config.h
• CONSENSUS_CONFIG_COUNTGAPS : consensus_config.h
• CONSENSUS_CONFIG_GAPBOUND : consensus_config.h
• CONSENSUS_CONFIG_GROUP : consensus_config.h
• CONSENSUS_CONFIG_ID : consensus_config.h
• CONSENSUS_CONFIG_LOWER : consensus_config.h
• CONSENSUS_CONFIG_UPPER : consensus_config.h
• CONST_CHAR_PTR : arb_proto_2_xsub.cxx
• CONST_PARAM_T : cbtypes.h
• CONSTEXPR : cxxforward.h
• CONSTEXPR_INLINE : cxxforward.h
• CONSTEXPR_INLINE_Cxx14 : cxxforward.h
• contradicts : test_unit.h
• COPY_2_OUT : gb_aci_impl.h
• CopyFromParent_AsPtr : AW_window.cxx
• CORE : client.c , struct_man.c
• COST_HIGH_DEFAULT : ali_global.cxx
• COST_LOW_DEFAULT : ali_global.cxx
• COST_MIDDLE_DEFAULT : ali_global.cxx
• COUNTING_MARKED : TreeCallbacks.cxx
• CRASH : ps_assert.hxx
• CREATEANSWER : probe.h
• CREATED : RNA3D_OpenGLEngine.hxx
• CROSSOVER_WS : MultiProbe.hxx
• ct_assert : chartable.h
• CURRENT_REST : tools.h
• CUSTOM_CRITERIA : NT_sort.cxx
• CWIDTH : ED4_cursor.cxx