ARB
Classes | Macros | Functions
awtc_next_neighbours.hxx File Reference
#include <arbdb_base.h>
#include <arbtools.h>
#include <PT_global_defs.h>
#include <pos_range.h>
#include <cb.h>
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Classes

class  FamilyList
 
class  FamilyFinder
 
class  PT_FamilyFinder
 

Macros

#define ff_assert(bed)   arb_assert(bed)
 
#define AWAR_NN_BASE   "next_neighbours/"
 
#define AWAR_NN_OLIGO_LEN   AWAR_NN_BASE "oligo_len"
 
#define AWAR_NN_MISMATCHES   AWAR_NN_BASE "mismatches"
 
#define AWAR_NN_FAST_MODE   AWAR_NN_BASE "fast_mode"
 
#define AWAR_NN_REL_MATCHES   AWAR_NN_BASE "rel_matches"
 
#define AWAR_NN_REL_SCALING   AWAR_NN_BASE "scaling"
 

Functions

void AWTC_create_common_next_neighbour_vars (AW_root *aw_root, const RootCallback &awar_changed_cb)
 
void AWTC_create_common_next_neighbour_fields (AW_window *aws, int scaler_length)
 

Macro Definition Documentation

#define ff_assert (   bed)    arb_assert(bed)
#define AWAR_NN_BASE   "next_neighbours/"

Definition at line 118 of file awtc_next_neighbours.hxx.

#define AWAR_NN_OLIGO_LEN   AWAR_NN_BASE "oligo_len"
#define AWAR_NN_MISMATCHES   AWAR_NN_BASE "mismatches"
#define AWAR_NN_FAST_MODE   AWAR_NN_BASE "fast_mode"
#define AWAR_NN_REL_MATCHES   AWAR_NN_BASE "rel_matches"
#define AWAR_NN_REL_SCALING   AWAR_NN_BASE "scaling"

Function Documentation

void AWTC_create_common_next_neighbour_vars ( AW_root aw_root,
const RootCallback &  awar_changed_cb 
)
void AWTC_create_common_next_neighbour_fields ( AW_window aws,
int  scaler_length 
)