Here is a list of all class members with links to the classes they belong to:

- b -

• b() : AW_rgb16 , AW_rgb_diff , AW_rgb_normalized , AW_screen_area , AW_world , ST_base_vector
• b1 : import_format
• b2 : import_format
• back : node , Reader
• backFeatureTableLine() : Importer
• background : AW_root_Motif
• background_color : AW_at
• backLine() : LineReader
• BackTraceInfo() : BackTraceInfo
• BACKWARD : SequenceIterator
• BadPositionsOrder() : BadPositionsOrder
• baggage : NA_Sequence
• baggage_len : NA_Sequence
• baggage_maxlen : NA_Sequence
• Bakt_Info() : Bakt_Info
• Bakterienliste : ST_Container
• barcode : NA_Sequence
• BareT : TypeOp< T > , TypeOp< T & > , TypeOp< T const > , TypeOp< void >
• base() : ALI_NORM_SEQUENCE , ALI_SEQUENCE
• BASE : AP_STACK< ELEM > , BaseInverter
• base : CurrSpecies , Insertions , Node , S_RNS , softbase , Struct2Dinfo , Struct2Dplus3D , Struct3Dinfo
• base2sequence_position() : ED4_cursor
• base_count() : BasePosition
• base_weight() : ALI_PROFILE
• baseAt() : SEC_db_interface
• BaseCounter() : BaseCounter
• BaseCounts() : BaseCounts
• BaseFrequencies() : BaseFrequencies
• BaseInverter() : BaseInverter
• baseonlynum : prettyopts
• BasePosition() : BasePosition
• bases : S_RNS , SQ_weights
• bases_and_gaps_at() : BaseFrequencies
• BaseT : CompountT< T > , CompountT< R()> , CompountT< R(P1)> , CompountT< R(P1,...)> , CompountT< T & > , CompountT< T * > , CompountT< T C::* > , CompountT< T[]> , CompountT< T[N]>
• BaseType : SpecificAliData< T > , SpecificGap< T >
• BasicStatus() : BasicStatus
• bAutoRotate : RNA3D_Global
• bc_size : gb_local_data
• bDisplayComments : RNA3D_Global
• bDisplayMask : RNA3D_Global
• bEColiRefInitialized : RNA3D_Global
• before() : timestamp
• beforeBase() : Dots
• begin() : GroupCluster , import_format , OligoRegistry , PositionPair , QueriedGroups , RangeList , SEC_drawn_positions
• begin_transaction() : ALI_ARBDB , GB_MAIN_TYPE
• beginDeconstructionPhase() : RootSynchronizer
• BeginTexturizer() : FINAL_TYPE< SEQTYPE >
• beginX : fragment , island
• beginY : fragment , island
• behind() : LinePart
• belongs_to_range() : gc_desc
• best_click() : AWT_graphic_event , FINAL_TYPE< SEQTYPE >
• BestEdge() : BestEdge
• bestMatch() : RSpecSet
• beta : S_Frand
• betterThan() : GroupPenalty
• between : BestEdge
• bi_ecoli : probe_struct_global
• BI_ecoli_ref() : BI_ecoli_ref
• BI_helix() : BI_helix
• BI_pairdef() : BI_pairdef
• bias : PS_BitMap , PS_BitSet
• big_data_min_size : gb_cache
• big_db : probe_struct_global
• big_enough() : DupCriteria
• bigger_extent() : AW::Rectangle
• bigger_table_entry_size_needed() : chartable::SepBaseFreq
• biggest_height_of_buttons : AW_at
• bind_against() : MatchingOligo
• bind_to_selected_item() : InfoWindow
• bind_to_species() : AP_sequence , MostLikelySeq
• bind_tree_callback() : BoundTreeAwarCallback
• binding_matrix : ALI_PROFILE_CONTEXT
• binop_pair() : binop_pair
• bit_is_set() : PART
• bitcnt : gb_compress_list
• bitcompress : gb_local_data
• bitcounter() : bitcounter
• BitField() : BitField
• bitmapOrText : aw_toggle_data
• bits : gb_compress_list
• bitstring : SpecSet
• bitstring_bytes() : SpecSetRegistry
• bitstring_longs() : SpecSetRegistry
• bituncompress : gb_local_data
• Bitvector() : Bitvector
• Block() : Block
• block_token() : TokenListBlock
• blowup_string() : AP_filter
• blue : ColorRGBf
• blueSize : GLwDrawingAreaPart
• bMapSaiDispListCreated : RNA3D_Global
• bMapSearchStringsDispListCreated : RNA3D_Global
• bond_thickness : SEC_displayParams
• bonds : ProbeCommonSettings , SEC_db_interface
• bootstrap : TreeNode::multifurc_limits
• bootstrap2branchlen() : TreeNode
• bootstrap_max : BootstrapConfig
• bootstrap_min : BootstrapConfig
• BootstrapConfig() : BootstrapConfig
• bootstrapped_seqpos() : AP_filter
• border : S_Spreading
• borders_sequence() : ALI_PROFILE
• bottom() : AW::Rectangle , AW_font_overlap , ED4_scrolled_rectangle
• BottomT : CompountT< T > , CompountT< R()> , CompountT< R(P1)> , CompountT< R(P1,...)> , CompountT< T & > , CompountT< T * > , CompountT< T C::* > , CompountT< T[]> , CompountT< T[N]>
• BoundActionTracker() : BoundActionTracker
• bounding_box() : AW::Rectangle
• BoundTreeAwarCallback() : BoundTreeAwarCallback
• BoundWindowCallback() : BoundWindowCallback
• box() : AW_device
• box_clip() : AW_clipable
• bPointSpritesSupported : RNA3D_Global
• branchlen2bootstrap() : TreeNode
• branchlength : TreeNode::multifurc_limits
• BranchLinewidthScaler() : BranchLinewidthScaler
• BranchMover() : BranchMover
• BranchRotator() : FINAL_TYPE< SEQTYPE >
• BranchScaler() : BranchScaler
• BranchWindow() : BranchWindow
• bRotateMolecule : RNA3D_Global
• brother : SingleDictTree
• bsel : color_save_data
• bubble_sort() : KeySorter
• buf : GEN_NodeTextBuilder
• buf1 : gb_local_data
• buf2 : gb_local_data
• buffer : arb_prm_struct , GB_DbScanner
• BUFFER_SIZE : PS_FileBuffer
• BufferedFileReader() : BufferedFileReader
• BufferedPipeReader() : BufferedPipeReader
• BufferPtr() : BufferPtr< T >
• bufferSize : GLwDrawingAreaPart
• build_consensus_string() : BaseFrequencies , ED4_abstract_group_manager
• build_consensus_string_to() : BaseFrequencies
• build_sel() : FieldSelDef
• build_sorted_list() : PartRegistry
• build_widget() : awt_check_box , awt_input_field , awt_radio_button , awt_string_handler , awt_text_viewport , awt_viewport , FINAL_TYPE< SEQTYPE >
• buildColorString() : ED4_SearchResults
• BuildDisplayList() : Structure3D
• buildInferableClusterStartingWith() : Clusterer
• buildIntergeneList() : GenePositionMap
• buildLeafList() : AP_tree
• buildParagraphTree() : FINAL_TYPE< SEQTYPE >
• buildPrimerTrees() : PrimerDesign
• buildQueryExpr() : QUERY::DbQuery
• buildStructureString() : SEC_root
• button : AW_buttons_struct , AW_event , AWT_graphic_event
• button_height() : AW_window
• button_length() : AW_window
• buttonWidth : aw_toggle_data
• by : compare_by_criteria
• by_pos_fig : QUERY::query_spec
• byte_order : gb_map_header
• bytebits : bitcounter