PositionPair Struct Reference

Collaboration diagram for PositionPair:

Public Member Functions
	PositionPair ()
	PositionPair (int begin_, int end_)
int	length () const
bool	overlapsWith (const PositionPair &other) const

Public Attributes
int	begin
int	end

Static Public Attributes
static int	genome_length = 0

Detailed Description

Definition at line 55 of file arb_gene_probe.cxx.

Constructor & Destructor Documentation

PositionPair::PositionPair ( )

inline

Definition at line 69 of file arb_gene_probe.cxx.

PositionPair::PositionPair ( int  begin_, int  end_  )

inline

Definition at line 70 of file arb_gene_probe.cxx.

Member Function Documentation

int PositionPair::length ( ) const

inline

Definition at line 76 of file arb_gene_probe.cxx.

Referenced by GenePositionMap::announceGene().

bool PositionPair::overlapsWith ( const PositionPair &  other ) const

inline

Definition at line 78 of file arb_gene_probe.cxx.

References begin, and end.

Referenced by GenePositionMap::announceGene().

Member Data Documentation

int PositionPair::begin

Definition at line 56 of file arb_gene_probe.cxx.

Referenced by GenePositionMap::buildIntergeneList(), create_split_gene(), insert_genes_of_organism(), ltNonOverlap::operator()(), and overlapsWith().

int PositionPair::end

Definition at line 57 of file arb_gene_probe.cxx.

Referenced by GenePositionMap::buildIntergeneList(), create_split_gene(), insert_genes_of_organism(), ltNonOverlap::operator()(), and overlapsWith().

int PositionPair::genome_length = 0

static

Definition at line 59 of file arb_gene_probe.cxx.

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The documentation for this struct was generated from the following file:

• TOOLS/arb_gene_probe.cxx