ARB
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#include <DNAml_rates_1_0.h>
Public Attributes | |
double | z |
nodeptr | next |
nodeptr | back |
int | number |
xarray * | x |
int | xcoord |
int | ycoord |
int | ymin |
int | ymax |
char | name [nmlngth+1] |
char * | tip |
Definition at line 60 of file DNAml_rates_1_0.h.
double node::z |
Definition at line 61 of file DNAml_rates_1_0.h.
Referenced by dli_dki(), evaluate(), hookup(), newview(), subtreeLength(), and uprootTree().
nodeptr node::next |
Definition at line 62 of file DNAml_rates_1_0.h.
Referenced by addElementLen(), findSiteRates(), freeTree(), getxnode(), initrav(), newview(), ntree_count_sons(), setuptree(), spanSubtree(), subtreeLength(), treeLength(), treeReadLen(), and uprootTree().
nodeptr node::back |
Definition at line 63 of file DNAml_rates_1_0.h.
Referenced by dli_dki(), evaluate(), findSiteRates(), findTipName(), hookup(), initrav(), newview(), setuptree(), spanSubtree(), subtreeLength(), treeLength(), treeReadLen(), and uprootTree().
int node::number |
Definition at line 64 of file DNAml_rates_1_0.h.
Referenced by addElementLen(), and setuptree().
xarray* node::x |
Definition at line 65 of file DNAml_rates_1_0.h.
Referenced by dli_dki(), evaluate(), freeTreeNode(), getxnode(), getxtip(), newview(), setupnodex(), and setuptree().
int node::xcoord |
Definition at line 66 of file DNAml_rates_1_0.h.
int node::ycoord |
Definition at line 66 of file DNAml_rates_1_0.h.
int node::ymin |
Definition at line 66 of file DNAml_rates_1_0.h.
int node::ymax |
Definition at line 66 of file DNAml_rates_1_0.h.
Definition at line 67 of file DNAml_rates_1_0.h.
Referenced by DI_MATRIX::extract_from_tree(), findTipName(), and getdata().
char* node::tip |
Definition at line 68 of file DNAml_rates_1_0.h.
Referenced by empiricalfreqs(), findSiteRates(), initrav(), makevalues(), newview(), setuptree(), spanSubtree(), subtreeLength(), treeLength(), and uprootTree().